Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0498900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24936060:24938782:-1 gene:Os04g0498900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to N-acetyltransferase ESCO1. (Os04t0498900-01)
Sequence

ATGACGAGAGGCAAGAAGGGGATGCAGCCCAAGATCAGTGCGTTCTTCAAGCGTCAGGCC
CCCGAGCCCGAGACGAGCAGTGGTGGCGACACGCATAGGGAAGGAACCTGCGGGATGGAG
GTGAAGAGGCCCAAGAGCTGTGCGGATGGCAAGGTCCTCAACAAGAAGAGGAACTACGCG
CAGTTCCACCTGGAGCTTGGGCAGCCCGATTTTCTCCTCCACATGTGCTCGGTTTGTGGC
ATGATGTATGCCCGCGGGAACGACGACGACGAGAAGGCTCACAAGGCATACCACAAGAGT
TACTTCGAGGGCGTCCCGTTCAAGGGTTGGCGCAATGAAACCGTGGTCGCGAGGTCTGAA
GGTGGGGATCGGATAATTCTTGTGACCGATGAAAATTCATGTGCTCGGAACAGCAAGGTC
CAGGAGGTGATCAAAGTGGTACAGAAGGAGCTGGGGTTTGGTGAAGGTCAGCTCCTTCAC
AAGCTTTGTAAGGTATATTTGTTCATATCTAGTCAGAGGATAGTGGGATGCCTTGTTGCG
GAACCAATCAAAACAGCACATAAAGTGATTCCAGGCTCCACAGAGGAAAACGGCACTGAT
CTGCCTGTTGATAAAATTGAACCAGTCAAAACAAACCATACATTAGAGTTCGGGAAAATC
AGTTTTAAGAGGGAAGTCCTGAAACGGCATGATCATTCAGACAAGAACAAAGAAGAGTAC
CGAGATCCTGGTGCTATAATATGTGAAAAGGAAGATGTTCCTGCACATTGTGGATTTCGA
GCAATTTGGGTTGTACCGTCACGCAGAAGAAAGCGAATAGGGTCACAACTGATGGATGCT
GCTAGGAAAAGCTTCCTCGAAGGCGAGACTTTGTGCATCTCACAGTGCGCTTTCTCACCG
CCTACTTCCTCCGGGAAGGCGCTGGCACGCAGCTATTGCAAGACCAGCGCATTCTTAGTC
TACAAGGAGCAAGATGCATAG

Peptide Sequence

PEP ID

Os04t0498900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24936060:24938782:-1 gene:Os04g0498900 transcript:Os04t0498900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to N-acetyltransferase ESCO1. (Os04t0498900-01)
Sequence

MTRGKKGMQPKISAFFKRQAPEPETSSGGDTHREGTCGMEVKRPKSCADGKVLNKKRNYA
QFHLELGQPDFLLHMCSVCGMMYARGNDDDEKAHKAYHKSYFEGVPFKGWRNETVVARSE
GGDRIILVTDENSCARNSKVQEVIKVVQKELGFGEGQLLHKLCKVYLFISSQRIVGCLVA
EPIKTAHKVIPGSTEENGTDLPVDKIEPVKTNHTLEFGKISFKREVLKRHDHSDKNKEEY
RDPGAIICEKEDVPAHCGFRAIWVVPSRRRKRIGSQLMDAARKSFLEGETLCISQCAFSP
PTSSGKALARSYCKTSAFLVYKEQDA

Transcript Sequence

Transcript ID

Os04t0498900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24936060:24938782:-1 gene:Os04g0498900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to N-acetyltransferase ESCO1. (Os04t0498900-01)
Sequence

GGGCGCTGTCCCCCCCTCCGCGCTGCACCGCAAACCAGCCGCCGCCTCCCGTCAAGGCCG
TCCTTCGCCGCCGCAGCCGTGAGGGCATCCCTCCCCCTCCCCGCTGAGCGAGCTACACTG
GCCTCTTTCCCCCCTGCCCCGTGCTGGACGCATGACGAGAGGCAAGAAGGGGATGCAGCC
CAAGATCAGTGCGTTCTTCAAGCGTCAGGCCCCCGAGCCCGAGACGAGCAGTGGTGGCGA
CACGCATAGGGAAGGAACCTGCGGGATGGAGGTGAAGAGGCCCAAGAGCTGTGCGGATGG
CAAGGTCCTCAACAAGAAGAGGAACTACGCGCAGTTCCACCTGGAGCTTGGGCAGCCCGA
TTTTCTCCTCCACATGTGCTCGGTTTGTGGCATGATGTATGCCCGCGGGAACGACGACGA
CGAGAAGGCTCACAAGGCATACCACAAGAGTTACTTCGAGGGCGTCCCGTTCAAGGGTTG
GCGCAATGAAACCGTGGTCGCGAGGTCTGAAGGTGGGGATCGGATAATTCTTGTGACCGA
TGAAAATTCATGTGCTCGGAACAGCAAGGTCCAGGAGGTGATCAAAGTGGTACAGAAGGA
GCTGGGGTTTGGTGAAGGTCAGCTCCTTCACAAGCTTTGTAAGGTATATTTGTTCATATC
TAGTCAGAGGATAGTGGGATGCCTTGTTGCGGAACCAATCAAAACAGCACATAAAGTGAT
TCCAGGCTCCACAGAGGAAAACGGCACTGATCTGCCTGTTGATAAAATTGAACCAGTCAA
AACAAACCATACATTAGAGTTCGGGAAAATCAGTTTTAAGAGGGAAGTCCTGAAACGGCA
TGATCATTCAGACAAGAACAAAGAAGAGTACCGAGATCCTGGTGCTATAATATGTGAAAA
GGAAGATGTTCCTGCACATTGTGGATTTCGAGCAATTTGGGTTGTACCGTCACGCAGAAG
AAAGCGAATAGGGTCACAACTGATGGATGCTGCTAGGAAAAGCTTCCTCGAAGGCGAGAC
TTTGTGCATCTCACAGTGCGCTTTCTCACCGCCTACTTCCTCCGGGAAGGCGCTGGCACG
CAGCTATTGCAAGACCAGCGCATTCTTAGTCTACAAGGAGCAAGATGCATAGGAGATGCT
GCAGAAGATGTTACATATCTGAAACTTCTCTTCCCATTGTAAAAATTGCTTTGCTGGGGA
TATATGTGAAACATAAACAGGCATGTTCTGCTTTTAGTGTAAGTCTAAGCACCAGAAGCA
GTGCGTTTTTGCAGGATCTCTATGTATTGACACTTGGATTTCCTGATCAGCAGCATTTTC
TGAATATCATTTCA