Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0498800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24932120:24935908:1 gene:Os04g0498800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cell division control protein 48 homolog B (AtCDC48b). (Os04t0498800-01)
Sequence	ATGGAAGAGGTTAGGGGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGA GGTGATGGGGACGGCGAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAAC CGCGCGGTTCTGGAGGCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAG GCCCGCGTGCTCGGCCTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACT GGAAAGAAAAGCATGGTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATT GATTCAATTTCTGTGCATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCT TTTACTGAAGCATATTCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAA CTTGATGACATATGTCCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGT CAGCTGTTGACTCTGATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTT GCATCTGCTACCAGGGTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGAC TCAGAGATAGAGGTTACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTAT ACCAAGAATCTACATCTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAAT GGTTATGTTGGAGCTGATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGT AGATTATCAAGCTCATCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAG TCTGCTAAATCTGTGGCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCT GTTTCATGGGATGATATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTT GAATGGCCCATCAAGCATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGG GTGCTATTGCATGGTCCACCAGGGTGCTCAAAGACTACCCTTGCAAAGGCTGCTGCTCAT GCTGCCCAAGCTTCTTTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGT GAAGGTGAAGCTTTGTTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATT ATATTTTTTGATGAGGCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCT AGTGGCAATGCCACGGTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGT TTAGAACTGGCTACGGGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGAT GCTGCTCTTCTGCGCCCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCG GAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTG GATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTG TGCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGT GACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTG GTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAA

Peptide Sequence

PEP ID	Os04t0498800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24932120:24935908:1 gene:Os04g0498800 transcript:Os04t0498800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cell division control protein 48 homolog B (AtCDC48b). (Os04t0498800-01)
Sequence	MEEVRGRESKDHRGGGGGGGGDGDGERTGRWRAEEVIAGNRAVLEALRELVMYPVLYARE ARVLGLNFPRGLLLHGPSGTGKKSMVRAVVRECNAHLTVIDSISVHKPHAGEGEKFMREA FTEAYSQASQGRPAVIFIDELDDICPPRGSRREQGSRIVGQLLTLMDGKSSKLLPHLVVV ASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLHLGECVDLQSVAASCN GYVGADLQALCREAARRAYGRLSSSSESENVLTLIMEDWESAKSVAKNSVTRGVTKEIPA VSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGCSKTTLAKAAAH AAQASFFSLSGAELYSKYVGEGEALLRRTFQMARLASPSIIFFDEADAIAPKRTGPSGNS SGNATVGERLLSTLLTEMDGLELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDA EGRYEILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLCREAGMAALRESLRSERFVC DDIHFQAALRSLRPSLTQSVVDEYSNAAIHGPLTRRKH

Transcript Sequence

Transcript ID	Os04t0498800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24932120:24935908:1 gene:Os04g0498800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cell division control protein 48 homolog B (AtCDC48b). (Os04t0498800-01)
Sequence	GGTTACCGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTG CCTTCCCCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTC TCGAGCTCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGG GGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGC GAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAG GCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGC CTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATG GTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTG CATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATAT TCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGT CCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTG ATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGG GTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTT ACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACAT CTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCT GATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCA TCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTG GCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGAT ATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAG CATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGT CCACCAGGGTGCTCAAAGACTACCCTTGCAAAGGCTGCTGCTCATGCTGCCCAAGCTTCT TTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTG TTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAG GCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACG GTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACG GGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGC CCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAA ATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTA GCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTGCAGGGAGGCGGGA ATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTC CAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCA AATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGC GCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATC GGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCATATGATTGC