Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0497200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24863994:24867715:-1 gene:Os04g0497200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endo-1,4-β-glucanase 3, endo-1,4-beta-glucanase 3 description:Putative membrane-bound endo-1,4-beta-glucanase, Synthesis of root cellulose, Modulation of root cell division and elongation (Os04t0497200-01)
Sequence	ATGTACTCGGCGAACCACTGGGGCGGGTCGTTCGAGATCGCCGCGGACGGCGCGGCGGAG GATGACCACAGCCGCAACATGGACCTGGACCGCGGCGCGCTGTCGGCGCGGCAGCACCAG CTGGACGAGACGCAGCAGAGCTGGCTGCTCGGCCCGCCGGAGGCCAAGAAGAAGGACAAG TACGTCGACCTCGGCTGCGTCGTCGTCAAGCGCAAGCTCCTCTGGTGGGTCCTCTGGACC CTCCTCGCCGCCTTCATCCTCATCGGCCTCCCCGTCATCATCGCCAAGTCCATCCCCAAG AAGAAGCCCCACGCCCCTCCCCCCGACCAGTACACCGACGCCCTCCACAAGGCCCTCCTC TTCTTCAACGCCCAGAAATCCGGCCGGCTCCCGAAGAACAACGGCATCAAATGGCGCGGC AACTCCGGCCTGTCGGATGGCTCCGATCTGACGGACGTCAAGGGCGGGCTCGTCGGCGGC TACTACGACGCCGGCGACAACATCAAGTTCCATTTCCCCTTGGCCTTCTCCATGACAATG CTCAGCTGGTCAGTGATCGAGTACAGCGCCAAGTACAAGGCGGTAGGGGAGTATGACCAT GTGAGGGAGCTCATCAAGTGGGGCACCGACTACCTGCTCCTCACCTTCAACTCCTCTGCT TCCACCATTGACAAAGTCTATAGCCAGGTGGGCATTGCGAAGATCAACGGCACCCAGCCG GACGACCACTACTGCTGGAACCGGCCGGAGGACATGGCGTACCCACGCCCCGTCCAGACG GCCGGCTCGGCGCCGGACCTCGGCGGCGAGATGGCGGCGGCGCTCGCGGCGGCCTCCATC GTGTTCCGCGACAACGCCGCCTACTCCAAGAAGCTCGTGAACGGCGCGGCCGCCGTGTAC AAGTTCGCGCGCAGCAGCGGCCGCCGCACCCCGTACTCCCGCGGCAACCAGTACATCGAG TACTACTACAACTCCACCAGCTACTGGGACGAGTACATGTGGAGCGCGGCGTGGATGTAC TACGCCACGGGGAACAACACCTACATCACCTTCGCCACCGACCCGCGGCTGCCCAAGAAC GCCAAGGCCTTCTACAGCATCCTCGACTTCTCCGTCTTCAGCTGGGACAACAAGCTGCCG GGCGCCGAGCTGCTGCTGTCGCGGCTCCGCATGTTCCTCAACCCGGGTTACCCCTACGAG GAGTCGCTCATCGGGTACCACAACACCACCAGCATGAACATGTGCACCTACTTCCCGCGC TTCGGCGCCTTCAACTTCACCAAGGGTGGGCTCGCGCAGTTCAACCACGGGAAGGGCCAG CCGCTGCAGTACACCGTCGCCAACTCCTTCCTCGCCGCGCTCTACGCCGACTACATGGAG TCCGTCAACGTCCCCGGCTGGTACTGCGGCCCCTACTTCATGACCGTCGACGATCTCCGC TCCTTCGCCAGGTCTCAGGTGAACTACATTCTTGGGGATAACCCGAAGAAGATGAGCTAC GTGGTGGGGTACGGCAAGAAGTACCCGCGGCGGCTGCACCACAGGGGGGCGTCGACGCCG CACAACGGCATCAAGTACTCGTGCACCGGCGGGTACAAGTGGAGGGACACCAAGGGGGCC GACCCGAACGTGCTCGTCGGCGCCATGGTCGGCGGGCCGGACAAGAACGACCAGTTCAAG GACGCGCGCCTCACCTACGCGCAGAACGAGCCGACGTTGGTGGGCAACGCCGGCCTCGTG GCCGCCCTCGTCGCCCTCACCAACAGCGGCCGCGGCGCGGGCGTCACCGCCGTCGACAAG AACACCATGTTCTCCGCCGTGCCGCCCATGTTCCCGGCCACGCCGCCGCCGCCGTCCAAG TGGAAGCCGTGA

Peptide Sequence

PEP ID	Os04t0497200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24863994:24867715:-1 gene:Os04g0497200 transcript:Os04t0497200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endo-1,4-β-glucanase 3, endo-1,4-beta-glucanase 3 description:Putative membrane-bound endo-1,4-beta-glucanase, Synthesis of root cellulose, Modulation of root cell division and elongation (Os04t0497200-01)
Sequence	MYSANHWGGSFEIAADGAAEDDHSRNMDLDRGALSARQHQLDETQQSWLLGPPEAKKKDK YVDLGCVVVKRKLLWWVLWTLLAAFILIGLPVIIAKSIPKKKPHAPPPDQYTDALHKALL FFNAQKSGRLPKNNGIKWRGNSGLSDGSDLTDVKGGLVGGYYDAGDNIKFHFPLAFSMTM LSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGIAKINGTQP DDHYCWNRPEDMAYPRPVQTAGSAPDLGGEMAAALAAASIVFRDNAAYSKKLVNGAAAVY KFARSSGRRTPYSRGNQYIEYYYNSTSYWDEYMWSAAWMYYATGNNTYITFATDPRLPKN AKAFYSILDFSVFSWDNKLPGAELLLSRLRMFLNPGYPYEESLIGYHNTTSMNMCTYFPR FGAFNFTKGGLAQFNHGKGQPLQYTVANSFLAALYADYMESVNVPGWYCGPYFMTVDDLR SFARSQVNYILGDNPKKMSYVVGYGKKYPRRLHHRGASTPHNGIKYSCTGGYKWRDTKGA DPNVLVGAMVGGPDKNDQFKDARLTYAQNEPTLVGNAGLVAALVALTNSGRGAGVTAVDK NTMFSAVPPMFPATPPPPSKWKP

Transcript Sequence

Transcript ID	Os04t0497200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24863994:24867715:-1 gene:Os04g0497200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endo-1,4-β-glucanase 3, endo-1,4-beta-glucanase 3 description:Putative membrane-bound endo-1,4-beta-glucanase, Synthesis of root cellulose, Modulation of root cell division and elongation (Os04t0497200-01)
Sequence	GCCACCACCGCCCCAAGAATAGCACCCGCGTTTCATGCGCTGATCGACCGATCGACCCAC CAGCTAAGCCACCCGCAGCCGCGGGGCGAGCCAAGCCCACCGCCGCAGCCGCAGCCACAG CCATGTACTCGGCGAACCACTGGGGCGGGTCGTTCGAGATCGCCGCGGACGGCGCGGCGG AGGATGACCACAGCCGCAACATGGACCTGGACCGCGGCGCGCTGTCGGCGCGGCAGCACC AGCTGGACGAGACGCAGCAGAGCTGGCTGCTCGGCCCGCCGGAGGCCAAGAAGAAGGACA AGTACGTCGACCTCGGCTGCGTCGTCGTCAAGCGCAAGCTCCTCTGGTGGGTCCTCTGGA CCCTCCTCGCCGCCTTCATCCTCATCGGCCTCCCCGTCATCATCGCCAAGTCCATCCCCA AGAAGAAGCCCCACGCCCCTCCCCCCGACCAGTACACCGACGCCCTCCACAAGGCCCTCC TCTTCTTCAACGCCCAGAAATCCGGCCGGCTCCCGAAGAACAACGGCATCAAATGGCGCG GCAACTCCGGCCTGTCGGATGGCTCCGATCTGACGGACGTCAAGGGCGGGCTCGTCGGCG GCTACTACGACGCCGGCGACAACATCAAGTTCCATTTCCCCTTGGCCTTCTCCATGACAA TGCTCAGCTGGTCAGTGATCGAGTACAGCGCCAAGTACAAGGCGGTAGGGGAGTATGACC ATGTGAGGGAGCTCATCAAGTGGGGCACCGACTACCTGCTCCTCACCTTCAACTCCTCTG CTTCCACCATTGACAAAGTCTATAGCCAGGTGGGCATTGCGAAGATCAACGGCACCCAGC CGGACGACCACTACTGCTGGAACCGGCCGGAGGACATGGCGTACCCACGCCCCGTCCAGA CGGCCGGCTCGGCGCCGGACCTCGGCGGCGAGATGGCGGCGGCGCTCGCGGCGGCCTCCA TCGTGTTCCGCGACAACGCCGCCTACTCCAAGAAGCTCGTGAACGGCGCGGCCGCCGTGT ACAAGTTCGCGCGCAGCAGCGGCCGCCGCACCCCGTACTCCCGCGGCAACCAGTACATCG AGTACTACTACAACTCCACCAGCTACTGGGACGAGTACATGTGGAGCGCGGCGTGGATGT ACTACGCCACGGGGAACAACACCTACATCACCTTCGCCACCGACCCGCGGCTGCCCAAGA ACGCCAAGGCCTTCTACAGCATCCTCGACTTCTCCGTCTTCAGCTGGGACAACAAGCTGC CGGGCGCCGAGCTGCTGCTGTCGCGGCTCCGCATGTTCCTCAACCCGGGTTACCCCTACG AGGAGTCGCTCATCGGGTACCACAACACCACCAGCATGAACATGTGCACCTACTTCCCGC GCTTCGGCGCCTTCAACTTCACCAAGGGTGGGCTCGCGCAGTTCAACCACGGGAAGGGCC AGCCGCTGCAGTACACCGTCGCCAACTCCTTCCTCGCCGCGCTCTACGCCGACTACATGG AGTCCGTCAACGTCCCCGGCTGGTACTGCGGCCCCTACTTCATGACCGTCGACGATCTCC GCTCCTTCGCCAGGTCTCAGGTGAACTACATTCTTGGGGATAACCCGAAGAAGATGAGCT ACGTGGTGGGGTACGGCAAGAAGTACCCGCGGCGGCTGCACCACAGGGGGGCGTCGACGC CGCACAACGGCATCAAGTACTCGTGCACCGGCGGGTACAAGTGGAGGGACACCAAGGGGG CCGACCCGAACGTGCTCGTCGGCGCCATGGTCGGCGGGCCGGACAAGAACGACCAGTTCA AGGACGCGCGCCTCACCTACGCGCAGAACGAGCCGACGTTGGTGGGCAACGCCGGCCTCG TGGCCGCCCTCGTCGCCCTCACCAACAGCGGCCGCGGCGCGGGCGTCACCGCCGTCGACA AGAACACCATGTTCTCCGCCGTGCCGCCCATGTTCCCGGCCACGCCGCCGCCGCCGTCCA AGTGGAAGCCGTGAGAGAGAATTCAATCCAACCGGCCGGCCAAGTACATCGCCGTGCCTA GTGGTTCCGAAGGTGTTTGATTAGATCAACGAGGTGTTTCGGTTCGTTTGGTCATACAGT TTTTGGTGATCACGCAATTCTTTTGTATTATACACGTTAACTTCGGCAAAATCGATACTG TGGATGATGGAATGCTTTATGCATGACCTGTAGATGAAAGATGTTTTCTTCATATAAATT ATGATCACGGTGGATGAATCAACAGATGTGATTACAAATAGGCTGCAA