Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0496800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24846908:24853939:-1 gene:Os04g0496800 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like domain containing protein. (Os04t0496800-01)
Sequence	ATGGCCTCGAGGGCGATCATTAGGAGAAGGAAGTATGCTCTGGAGCATACTAATATCCCT GTTTTATTACGACATTCATCTATTTCTACTTTTGGGCAAGAAAAGTTTGGATGTGAAATT GAGCAAAGCACTGCATCTCAAAACTCAAGAGAATCAAACCATGAGAAGGCACAATACATC TTAAGGAAACAAGGACTTTTGGGCCTTAGTATCCTGTGTCACCCAACTCGTGGTGCTTCA CTTGCTTCTTATGAATCTAAACCACAGACTTTTGGTTTCCCCTTGGGAGCCAGGTATTTC CTACAGTCAGTACGCCCAACATCAAGCACTGCTGGGCAGCCTAAAGTTGGTATTCTGGAC GAGCGGAGCGAGAACCAGAACCAGAATCAGGGGAAAAAGGAGGCATCCCCAGAAGAGTGT GATCAGGCGGTGGAAGGCTTAAGCACTGCAAAAGCTAAAGCTAAAGCTAAGCTGGTGCAG GAAGTACAAAAGTCTGACCAGTCAATCATACATAAATTTTGGGCAATACTTCTAGGTATT GGACCTGCTCTGCGTGCTGTTGCTTCAATGAGCAGGGCTGACTGGGCTGCAAAATTGAAG CATTGGAAGGATGAGTTTGTTTCTACACTGCAGCATTATTGGTTGGGAACTAAGCTGCTG TGGGCAGATGTTAGGATTTCATCTAGATTGTTAGTGAAACTTGCTGGTGGAAAGAGCCTA ACAAGAAGAGAGAGGCAACAGCTTACACGCACAACAGCTGATTTGTTTAGGCTTGTACCT TTTGCTGTGTTCATCATTGTTCCCTTCATGGAATTTTTACTACCAGTCTTCCTCAAGATG TTCCCTAACATGTTGCCATCGACTTTCCAGGACAAGATGAAGGAAGAGGAGGCATTGAAA AGGAAATTGAAAGCAAGGATGGAATATGCAAGATTTTTACAAGATACTGCAAAAGAAATG GCAAAGGAAGTGCAGACGTCACGTAGTGGAGAAATGAAACAGACAGCTGAAGATCTGGAT GAATTTTTGAACAAGGTTAGGAAAGGTGGACATGTCTCAAATGAAGAAATTTTGAGCTTT GCAAAGCTGTTTAATGATGAACTGACTTTGGATAACATGAACAGAGCACGGTTGGTAAAT ATGTGTAAATATATGGGGATCCAACCTTTTGGTACAGACCACTACCTGACATTCATGCTT CGGAAGAAATTGCAAGAAATTAAGAATGATGATAAGATGATCCAGGCTGAGGGCGTGGAG TCTCTTTCTGAGGAGGAGCTTCGACAAGCATGTCGAGAACGTGGCCATCTTGGTTTGTTG TCAACAGAGGAGATGCAAAATCAGCTCAGAGACTGGTTGGATTTGTCACTTAATCATTCT GTGCCATCATCTCTTCTAATACTATCAAGAGCTTTTACCATGTCTGGGAAAATGAAGCCC GAGGAGGCTGTTGTAGCAACATTATCTTCTCTTCCAGATGAAGTTGTAGATACTGTTGGG ACAGTTCTTCCTTCAGAAGATTCTGTGTCCGACAGGAAGCGGAAATTGGAATTCCTGGAA ATGCAGGAAGAACTTATCAAGGAAGAGGAGAAAAGGCAAGAGAAAGAAGACAAGGCAAAA CTTGAGGTACCAAAGGCAACTGAAGAAGATGTGGCTTTGAAAGAAATGACTGAGCCTACT GCTAGGGAAGAAAAGGAACTAAAGAAAGCAAAAGTTGAGCATGACAGGAAGGAGCAGCTT TGTGATATCAGCCAAGCATTGGCCGTGCTTGCATCTGCTTCTTCTGTTGCCAAGGAACGT CAAGAGTTTCTGAATCTTGTCAATAAAGAGATAGAACTATATAACACCATGCTGGAAAAG GAGGGTACAAAAGGTGAAGAAGAAGCTAGGAGAGCATACAAGGCTGCAAGAGAGGAATCA GACCATGCTGCAGAGATAGCTGCAGGAGAAAAGGTCTCTTCAGCATTAATAGAGAGGGTT GATGCAATGCTTCAGAAATTAGAGAAAGAGATTGATGATGTTGATGCACGAATAGGCAAC CGCTGGCAGCTGCTTGATAGTGACCGTGATGGCAAAGTTACCCCTGACGAGGTAGCAGCT GCAGCAAATTATCTCAAAGACACTATAGGGAAGGAAGGCGTCCAAGAGCTTATTAGCAAT CTTTCTAAAGACAAAGATGGAAAGATCCTCGTTGAAGACATTGTGAAGCTGGCATCACAA ACGGGAGAAAGCAACGAACAAGAAGAAACCCCACGGCAATAG

Peptide Sequence

PEP ID	Os04t0496800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24846908:24853939:-1 gene:Os04g0496800 transcript:Os04t0496800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like domain containing protein. (Os04t0496800-01)
Sequence	MASRAIIRRRKYALEHTNIPVLLRHSSISTFGQEKFGCEIEQSTASQNSRESNHEKAQYI LRKQGLLGLSILCHPTRGASLASYESKPQTFGFPLGARYFLQSVRPTSSTAGQPKVGILD ERSENQNQNQGKKEASPEECDQAVEGLSTAKAKAKAKLVQEVQKSDQSIIHKFWAILLGI GPALRAVASMSRADWAAKLKHWKDEFVSTLQHYWLGTKLLWADVRISSRLLVKLAGGKSL TRRERQQLTRTTADLFRLVPFAVFIIVPFMEFLLPVFLKMFPNMLPSTFQDKMKEEEALK RKLKARMEYARFLQDTAKEMAKEVQTSRSGEMKQTAEDLDEFLNKVRKGGHVSNEEILSF AKLFNDELTLDNMNRARLVNMCKYMGIQPFGTDHYLTFMLRKKLQEIKNDDKMIQAEGVE SLSEEELRQACRERGHLGLLSTEEMQNQLRDWLDLSLNHSVPSSLLILSRAFTMSGKMKP EEAVVATLSSLPDEVVDTVGTVLPSEDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAK LEVPKATEEDVALKEMTEPTAREEKELKKAKVEHDRKEQLCDISQALAVLASASSVAKER QEFLNLVNKEIELYNTMLEKEGTKGEEEARRAYKAAREESDHAAEIAAGEKVSSALIERV DAMLQKLEKEIDDVDARIGNRWQLLDSDRDGKVTPDEVAAAANYLKDTIGKEGVQELISN LSKDKDGKILVEDIVKLASQTGESNEQEETPRQ

Transcript Sequence

Transcript ID	Os04t0496800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24846908:24853939:-1 gene:Os04g0496800 gene_biotype:protein_coding transcript_biotype:protein_coding description:LETM1-like domain containing protein. (Os04t0496800-01)
Sequence	ACCCGCTGCCTCTGCCTCCGCCTCCTTCCTTCCTTCCTGCAAAACCGCGAGCGCCCCGCG GCTCTCTGCTCCCCCACTCCTCCCGCGGAGCCCCTCGCCCCGCCGGATCCCACGCACGCA CGACGCGGCTCGACGCGACGGGTTCCACCGTGCGGCCGATCCGCCGCCAGAGCCCCGGGT TCTACCCGGAAAGGCATAACCCTGACATTCTCTTGAGAAAAGGAAGAAGCAACCAAAAAT GGCCTCGAGGGCGATCATTAGGAGAAGGAAGTATGCTCTGGAGCATACTAATATCCCTGT TTTATTACGACATTCATCTATTTCTACTTTTGGGCAAGAAAAGTTTGGATGTGAAATTGA GCAAAGCACTGCATCTCAAAACTCAAGAGAATCAAACCATGAGAAGGCACAATACATCTT AAGGAAACAAGGACTTTTGGGCCTTAGTATCCTGTGTCACCCAACTCGTGGTGCTTCACT TGCTTCTTATGAATCTAAACCACAGACTTTTGGTTTCCCCTTGGGAGCCAGGTATTTCCT ACAGTCAGTACGCCCAACATCAAGCACTGCTGGGCAGCCTAAAGTTGGTATTCTGGACGA GCGGAGCGAGAACCAGAACCAGAATCAGGGGAAAAAGGAGGCATCCCCAGAAGAGTGTGA TCAGGCGGTGGAAGGCTTAAGCACTGCAAAAGCTAAAGCTAAAGCTAAGCTGGTGCAGGA AGTACAAAAGTCTGACCAGTCAATCATACATAAATTTTGGGCAATACTTCTAGGTATTGG ACCTGCTCTGCGTGCTGTTGCTTCAATGAGCAGGGCTGACTGGGCTGCAAAATTGAAGCA TTGGAAGGATGAGTTTGTTTCTACACTGCAGCATTATTGGTTGGGAACTAAGCTGCTGTG GGCAGATGTTAGGATTTCATCTAGATTGTTAGTGAAACTTGCTGGTGGAAAGAGCCTAAC AAGAAGAGAGAGGCAACAGCTTACACGCACAACAGCTGATTTGTTTAGGCTTGTACCTTT TGCTGTGTTCATCATTGTTCCCTTCATGGAATTTTTACTACCAGTCTTCCTCAAGATGTT CCCTAACATGTTGCCATCGACTTTCCAGGACAAGATGAAGGAAGAGGAGGCATTGAAAAG GAAATTGAAAGCAAGGATGGAATATGCAAGATTTTTACAAGATACTGCAAAAGAAATGGC AAAGGAAGTGCAGACGTCACGTAGTGGAGAAATGAAACAGACAGCTGAAGATCTGGATGA ATTTTTGAACAAGGTTAGGAAAGGTGGACATGTCTCAAATGAAGAAATTTTGAGCTTTGC AAAGCTGTTTAATGATGAACTGACTTTGGATAACATGAACAGAGCACGGTTGGTAAATAT GTGTAAATATATGGGGATCCAACCTTTTGGTACAGACCACTACCTGACATTCATGCTTCG GAAGAAATTGCAAGAAATTAAGAATGATGATAAGATGATCCAGGCTGAGGGCGTGGAGTC TCTTTCTGAGGAGGAGCTTCGACAAGCATGTCGAGAACGTGGCCATCTTGGTTTGTTGTC AACAGAGGAGATGCAAAATCAGCTCAGAGACTGGTTGGATTTGTCACTTAATCATTCTGT GCCATCATCTCTTCTAATACTATCAAGAGCTTTTACCATGTCTGGGAAAATGAAGCCCGA GGAGGCTGTTGTAGCAACATTATCTTCTCTTCCAGATGAAGTTGTAGATACTGTTGGGAC AGTTCTTCCTTCAGAAGATTCTGTGTCCGACAGGAAGCGGAAATTGGAATTCCTGGAAAT GCAGGAAGAACTTATCAAGGAAGAGGAGAAAAGGCAAGAGAAAGAAGACAAGGCAAAACT TGAGGTACCAAAGGCAACTGAAGAAGATGTGGCTTTGAAAGAAATGACTGAGCCTACTGC TAGGGAAGAAAAGGAACTAAAGAAAGCAAAAGTTGAGCATGACAGGAAGGAGCAGCTTTG TGATATCAGCCAAGCATTGGCCGTGCTTGCATCTGCTTCTTCTGTTGCCAAGGAACGTCA AGAGTTTCTGAATCTTGTCAATAAAGAGATAGAACTATATAACACCATGCTGGAAAAGGA GGGTACAAAAGGTGAAGAAGAAGCTAGGAGAGCATACAAGGCTGCAAGAGAGGAATCAGA CCATGCTGCAGAGATAGCTGCAGGAGAAAAGGTCTCTTCAGCATTAATAGAGAGGGTTGA TGCAATGCTTCAGAAATTAGAGAAAGAGATTGATGATGTTGATGCACGAATAGGCAACCG CTGGCAGCTGCTTGATAGTGACCGTGATGGCAAAGTTACCCCTGACGAGGTAGCAGCTGC AGCAAATTATCTCAAAGACACTATAGGGAAGGAAGGCGTCCAAGAGCTTATTAGCAATCT TTCTAAAGACAAAGATGGAAAGATCCTCGTTGAAGACATTGTGAAGCTGGCATCACAAAC GGGAGAAAGCAACGAACAAGAAGAAACCCCACGGCAATAGGTAGATAAACAGTCGCTTCC GTGGCTGTTGAAGTTACCAGCCCACTCTTTTCCGCCGGTAAGCGCATGGCAGTGCCATGT GTAACAAAAATGGCAGGACGGTCATTTTTTTTGTTCCGACTGACTGCCGTGGAGAGAGTT AGCGTATAGTTAGGCATCAGGTTTCTATAGGTGAATGGCAACTGAAATTCCAACCTGTTG TGGGTTGCCATTGAAATGGACATGCTGAACGGCCAGATGGGACAATAATTCATGCCCAAT CCAAATAATCTGAATAAATATATAGATATTG