Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0496400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24834417:24839782:1 gene:Os04g0496400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0496400-01)
Sequence	ATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGC CCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCA ATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTT GCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTT CAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGAT AACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCA GATGGCGAGGACGAATTTACTGATGATGATGGTACTGTTTACAAGTGGGATCGTGTCCTG AGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGAC ATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACA TTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAAAGAACCAACAAAGGTAGAAAAG AGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAAAAGGAAGCTAACAAA CCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGCCT GATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTCCAAATGTGGAATTATAAAGGAG GACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATACTGACAGAGAAACAGGCAGAAAG AAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTCTGTAGCACTAGCAATTCAACTG TTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCTAATGTCTGTTAGCCCGGCCAAA TTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAA ACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACG ATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAA ACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGGTCCAGTT GATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGAC CGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAA ATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCA GAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAG

Peptide Sequence

PEP ID	Os04t0496400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24834417:24839782:1 gene:Os04g0496400 transcript:Os04t0496400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0496400-01)
Sequence	MEGGGEVGWYVLGPNQEHVGPYALSELREHFANGYISESSMLWAEGRSEWMPLSSIPDLL AVVTKKDQPDEGIEDDFDKFQKEVIEAEAEVEASTDKAADNDINQEHGADDPDDRPATPP DGEDEFTDDDGTVYKWDRVLRAWVPQDDLEGKNDNYEVEDMTFAHEEEVFQAPDIAGSTT LEENNVSAEIEIKEPTKVEKRADKKRKSSEKPADKKEANKPPDSWFDLKVNTHVYVTGLP DDVTAEEIVEVFSKCGIIKEDPETRKPRVKIYTDRETGRKKGDALVTYLKEPSVALAIQL LDGTSFRPGGKTLMSVSPAKFEQKGDVFISKKTDKQKKRKTKKVEDKILGWGGHDDKKVT ITTTVILRHMFTPAELRADETLLPELEADVREECMKLGPVDNVKVCENHPEGVILVKFKD RKDGIKCIEKMNGRWFGGNQIQASEDDGSINHALIRDYDAEVSRLDRFGEELEEST

Transcript Sequence

Transcript ID	Os04t0496400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24834417:24839782:1 gene:Os04g0496400 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, RNP-1 domain containing protein. (Os04t0496400-01)
Sequence	GGAAACCCCAGCCTCCAAACCGCGCCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCC GCGTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGC CCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTAC GTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACAT TTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGG ATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGAT GAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAG GTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGAT GATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGAT GGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAA GGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTC CAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATT GAAATCAAAGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAG AAGCCAGCCGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTT AACACACATGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAG GTATTTTCCAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAA ATCTATACTGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAG GAGCCTTCTGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGT AAGACTCTAATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCT AAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGA TGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATG TTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTT AGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCA GAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAG ATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATC AACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAA GAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTG ATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATC ATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTT GGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCA CCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAACATGTTCGTT TTGACATATTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCTCCTTGGTATGCAT AAATCCACACTGATGATA