Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0492800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24640500:24641442:1 gene:Os04g0492800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 22 description:Similar to H0425E08.6 protein. (Os04t0492800-01)
Sequence	ATGCCGCCTGAGCCGCCAGCGTCTCCTCCTCCTCCCAAGAAGATGTCACCGCCGGGAGCG GGAGCGGGAGCGGGGAGCAAGAAGAAGCAGCAGCAGCAGGCCGACGCCGCGGAGCTGGCG CGCGTGTTCGAGCTGTTCGACAGGAACGGCGACGGGCGGATCACGCGGGAGGAGCTGGAG GACTCGCTGGGGAAGCTCGGGATCCCCGTGCCGGCCGACGAGCTGGCGGCCGTGATCGCG CGCATCGACGCCAACGGCGACGGGTGCGTGGACGTCGAGGAGTTCGGGGAGCTCTACCGC TCCATCATGGCCGGCGGGGACGACAGCAAGGACGGCCGCGCCAAGGAGGAAGAGGAGGAG GAGGACGGCGACATGAGGGAGGCGTTCCGGGTGTTCGACGCCAACGGCGACGGGTACATC ACGGTGGACGAGCTCGGCGCCGTGCTGGCGTCGCTGGGGCTGAAGCAGGGCCGCACGGCG GAGGAGTGCCGTCGCATGATCGGCCAGGTCGACCGCGACGGCGACGGCCGCGTCGACTTC CACGAGTTCCTCCAGATGATGCGCGGCGGCGGGTTCGCCGCCCTCGGCTGA

Peptide Sequence

PEP ID	Os04t0492800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24640500:24641442:1 gene:Os04g0492800 transcript:Os04t0492800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 22 description:Similar to H0425E08.6 protein. (Os04t0492800-01)
Sequence	MPPEPPASPPPPKKMSPPGAGAGAGSKKKQQQQADAAELARVFELFDRNGDGRITREELE DSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEE EDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDF HEFLQMMRGGGFAALG

Transcript Sequence

Transcript ID	Os04t0492800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24640500:24641442:1 gene:Os04g0492800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 22 description:Similar to H0425E08.6 protein. (Os04t0492800-01)
Sequence	AAGTTCCCACTCCTCCCGCGCGGCCTCCTCTCCTACCTCCCCGCCAACCTCTCCTCCATC CTCCCAGTCGCGCGCGGCGCCGCCTCCACCTGCGAGGCTTCTTCGACGACGACGACAACC ATGCCGCCTGAGCCGCCAGCGTCTCCTCCTCCTCCCAAGAAGATGTCACCGCCGGGAGCG GGAGCGGGAGCGGGGAGCAAGAAGAAGCAGCAGCAGCAGGCCGACGCCGCGGAGCTGGCG CGCGTGTTCGAGCTGTTCGACAGGAACGGCGACGGGCGGATCACGCGGGAGGAGCTGGAG GACTCGCTGGGGAAGCTCGGGATCCCCGTGCCGGCCGACGAGCTGGCGGCCGTGATCGCG CGCATCGACGCCAACGGCGACGGGTGCGTGGACGTCGAGGAGTTCGGGGAGCTCTACCGC TCCATCATGGCCGGCGGGGACGACAGCAAGGACGGCCGCGCCAAGGAGGAAGAGGAGGAG GAGGACGGCGACATGAGGGAGGCGTTCCGGGTGTTCGACGCCAACGGCGACGGGTACATC ACGGTGGACGAGCTCGGCGCCGTGCTGGCGTCGCTGGGGCTGAAGCAGGGCCGCACGGCG GAGGAGTGCCGTCGCATGATCGGCCAGGTCGACCGCGACGGCGACGGCCGCGTCGACTTC CACGAGTTCCTCCAGATGATGCGCGGCGGCGGGTTCGCCGCCCTCGGCTGATCCGTCCAT CTCTTCACTTCTGCTTCATACTGGTAGATCAGGTGTAGATACTGGCTTTCTTCAAGGAAA TCACGTAACCCCACGTATGCTCCAAAAATTTCTTGGTTTGTTCGTTAAGATTGATGGGAT TGCTAATTAACTAAGTGTACAAGAATTTCTTGGTAAGAAATTCTGTTTTTCCCTGAATTT TCAGGGTTTTTCTCGTGTAAAACTGTAAAGGTGAACATTTTGG