Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0492400-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:24611415:24615159:1 gene:Os04g0492400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0425E08.4 protein. (Os04t0492400-01);Similar to H0425E08.4 protein. (Os04t0492400-02)
Sequence	ATGAAGACGCCATCACTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCTACG AGTTGTGTGCCAATTGTATCAGAAAGGGATCTACAGCTACCATCACCAGCTGTCGAGATA ATCCCATCAAAGAGTGCTCATCCTTACAAATATGCTGGCGAGAAGGTTGATGTTCAAGGT CTTGACATTTTCAAGGGGAAGGTCAGTGTAGCGGATATGATAGCCTTCTCCCCTTCTGAA GTAGTCGCATCCAAATATGATGGATCTCTGAAATATTGGGAGAGTTCCATTACTCTCGTC AACATTATTAAAAATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGCAAGCGGGTTCTA GAGCTTGGTTGTGGATCTGGTCTGGCTGGGATTTTTGCCTGTTTGAAGGGTGCATCCACA GTTCATTTTCAGGACACAAATGCAGAAACAATAAGATGCAGAGCAATACCCAATGTGCTT GCAAACCTTGAGCAGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCTGTTACACCA TCACGACAACTGTTAGCCCCGAATGTACATTTCTATGCTGGGGACTGGGAGGAGCTCCCT ACTATTCTCTCAGTTGTACACCCACCTGCAGCACCAACAAACCTTAGCTTCTCAGAGGAC GACTTTATGGATGGCTGCAGTAGCCATGATGGGAGCAGCATAGTTGGTGTCGACAATTGC CCCAGGCGATCAAGGAAACTTTCTGGTAGCCGTGCATGGGAGAGGGCCAGTGAGACAGAC CAAGCTGATGGAGGCTATGATGTAATTTTGATTTCTGAGGTCCCCTATGCGGTGAACTCT TTGAAGAAGCTCTATGCCCTTATCACAAAGTGCCTGCGACCCCCATACGGAGTACTGTAT GTGGTTTCAAAGAAGAACTTGGTTGGTTCCAATGGCGGCGCAAGGCAACTCAGAGCTTTG ATGGAGGAGGAGGGTGTCCTTGGTGGCCACTTTTTAACCGAGTTAGCTGACCGGGAAATT TGGAAGTTCTTCTTCAAGTAA

Peptide Sequence

PEP ID	Os04t0492400-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:24611415:24615159:1 gene:Os04g0492400 transcript:Os04t0492400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0425E08.4 protein. (Os04t0492400-01);Similar to H0425E08.4 protein. (Os04t0492400-02)
Sequence	MKTPSLLVQCFPGLLPSKATSCVPIVSERDLQLPSPAVEIIPSKSAHPYKYAGEKVDVQG LDIFKGKVSVADMIAFSPSEVVASKYDGSLKYWESSITLVNIIKNEIRDGQLSFRGKRVL ELGCGSGLAGIFACLKGASTVHFQDTNAETIRCRAIPNVLANLEQARDRQNRPSESPVTP SRQLLAPNVHFYAGDWEELPTILSVVHPPAAPTNLSFSEDDFMDGCSSHDGSSIVGVDNC PRRSRKLSGSRAWERASETDQADGGYDVILISEVPYAVNSLKKLYALITKCLRPPYGVLY VVSKKNLVGSNGGARQLRALMEEEGVLGGHFLTELADREIWKFFFK

Transcript Sequence

Transcript ID	Os04t0492400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24611415:24615159:1 gene:Os04g0492400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0425E08.4 protein. (Os04t0492400-01);Similar to H0425E08.4 protein. (Os04t0492400-02)
Sequence	CACGGACGGGGGGACTCTCTCTGGCTGCCATGGCAGAAGCGGCGAAGCTTCCACGGGTCT CCGCCTATATATCCCCACCCCCAAGCCCGCGCCTTGCCGACCTCTACTCCTCCTAGGCGT GTGGCGGGTTTGACTTTCTGACTTTGGGAGGGAGATTTGTCCAAGAAGAATTCCGTTGGA GGAGGATTCGGAGAGCTCCATTGGTCTGTGGGTCGGTCGGTCCAGCTTGCTGGAGAATAA GAAGGGGGTGTTGTTGCGTTGCGGGCGAGGGAAGGAGGGGAGGAGAGGAGGCGTCTTGCC GTTGGGGTTCTGATCCCTCTTGGGGCTCCCGTCGAGGAGGTGGCACGATGAAGACGCCAT CACTGCTTGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCTACGAGTTGTGTGCCAA TTGTATCAGAAAGGGATCTACAGCTACCATCACCAGCTGTCGAGATAATCCCATCAAAGA GTGCTCATCCTTACAAATATGCTGGCGAGAAGGTTGATGTTCAAGGTCTTGACATTTTCA AGGGGAAGGTCAGTGTAGCGGATATGATAGCCTTCTCCCCTTCTGAAGTAGTCGCATCCA AATATGATGGATCTCTGAAATATTGGGAGAGTTCCATTACTCTCGTCAACATTATTAAAA ATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGCAAGCGGGTTCTAGAGCTTGGTTGTG GATCTGGTCTGGCTGGGATTTTTGCCTGTTTGAAGGGTGCATCCACAGTTCATTTTCAGG ACACAAATGCAGAAACAATAAGATGCAGAGCAATACCCAATGTGCTTGCAAACCTTGAGC AGGCTCGGGACAGGCAGAACAGACCATCAGAGAGCCCTGTTACACCATCACGACAACTGT TAGCCCCGAATGTACATTTCTATGCTGGGGACTGGGAGGAGCTCCCTACTATTCTCTCAG TTGTACACCCACCTGCAGCACCAACAAACCTTAGCTTCTCAGAGGACGACTTTATGGATG GCTGCAGTAGCCATGATGGGAGCAGCATAGTTGGTGTCGACAATTGCCCCAGGCGATCAA GGAAACTTTCTGGTAGCCGTGCATGGGAGAGGGCCAGTGAGACAGACCAAGCTGATGGAG GCTATGATGTAATTTTGATTTCTGAGGTCCCCTATGCGGTGAACTCTTTGAAGAAGCTCT ATGCCCTTATCACAAAGTGCCTGCGACCCCCATACGGAGTACTGTATGTGGTTTCAAAGA AGAACTTGGTTGGTTCCAATGGCGGCGCAAGGCAACTCAGAGCTTTGATGGAGGAGGAGG GTGTCCTTGGTGGCCACTTTTTAACCGAGTTAGCTGACCGGGAAATTTGGAAGTTCTTCT TCAAGTAAACTAGCAAACCAAGGAGCTGGGAAGATGAAATGGGGCCCTGGCCTTGTGACA CAATTTTTTGATGTCTACTCTGCAGCGCTGTACATACCGCAAAGCGTAGTTCCATTAATT CTTTGGTAATATAGGATTATGATATGTGTGCCTCAGTTGTTGTGCTTGCTGATGTGTTGG AAATTCCACCCTTTTGTAGATCTCCTATGTGGTGTTGCTAAGTAAAGAAATCAAATTGTA ATGAACCTTCTGCATACCGAAATTATACGGTGATGGCATTAGTCAGAGCACGATACCAGA AATATTTACGAACTGTTACTACTTGCTTGG