Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0490400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24505544:24508396:-1 gene:Os04g0490400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome recycling factor family protein. (Os04t0490400-01)
Sequence

ATGGCGCTCTTCCTGCGCCGAGGCGCGGCCCTTGCTGCCCGCTCCATCCGCGCAGCCGCC
GCATCCTCCGCTTCCACCTCCGTCCACCGCCTACCGTCCGTCGGATCCCTCGCCGGCGCG
AGGGAGTTGGCCCCCACGAAGCTGTTCCTCCTGGAGGCCCGGAGAGGCTTCGCGAAGGGG
AAGAAATCGAAGGATGATGGTCGAGGCGATACAGTTCAGGATGCTCCTGACATTGGACCG
ACTGTCAAATCTGCTGCAACTCAGCAGATGGAGGCAGCCGTTGTTGCATTGTCACGGGAG
CTTAGTAAATTGCGAACGGGAAGAGCTTCTCCTGGTATGCTTGATCACATCATGGTGGAG
ACTACAGGTGTTAAGGTTGCGTTGAATCGCTTGGCCGTTGTTTCTGTCCTTGATGCACAT
ACCCTATCAGTGATGCCTTATGATCCGAGTTCAATGAAGTCTATTGAGCATGCGATCATC
TCATCTCCATTGGGCATCAATCCAACACCTGATGGCAACAGGATCATAGCAAACATCCCA
CCGTTGACAAAGGAGAATATACAGGCACTGTGTAAGGTTGTCACTAAATCTGCCGAGGAT
TTCAAACAAAGTATTAGACGAGCGCGCCAAAAGGCACTTGATACGATAAAGAAATCTGCG
TCTGGTATGCCGAAGGATGATGTAAAACGACTTGAGAAGGAGGTTGAAGAATTGACCAAG
AAGTTCATAAAGTCAGCAGATGATATGTGCAAGGCTAAGGAGAAGGAAATCTCTGGAAAC
TGA

Peptide Sequence

PEP ID

Os04t0490400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24505544:24508396:-1 gene:Os04g0490400 transcript:Os04t0490400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome recycling factor family protein. (Os04t0490400-01)
Sequence

MALFLRRGAALAARSIRAAAASSASTSVHRLPSVGSLAGARELAPTKLFLLEARRGFAKG
KKSKDDGRGDTVQDAPDIGPTVKSAATQQMEAAVVALSRELSKLRTGRASPGMLDHIMVE
TTGVKVALNRLAVVSVLDAHTLSVMPYDPSSMKSIEHAIISSPLGINPTPDGNRIIANIP
PLTKENIQALCKVVTKSAEDFKQSIRRARQKALDTIKKSASGMPKDDVKRLEKEVEELTK
KFIKSADDMCKAKEKEISGN

Transcript Sequence

Transcript ID

Os04t0490400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24505544:24508396:-1 gene:Os04g0490400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosome recycling factor family protein. (Os04t0490400-01)
Sequence

GCGACCGAGTTCTAAAAAAAAAAAAAAACTGCGAGACCGCAAAGGAAGAACAAAACCCAT
CAAAACCCTCGTTCGCCGCCGCCGCCGCCGCTCGCCGGCGAAGAACCCCTGAACCCTCCG
GTAAGCCCTGGTAGTTAGAAACCGAGTACCTAATCTCATGGCGCTCTTCCTGCGCCGAGG
CGCGGCCCTTGCTGCCCGCTCCATCCGCGCAGCCGCCGCATCCTCCGCTTCCACCTCCGT
CCACCGCCTACCGTCCGTCGGATCCCTCGCCGGCGCGAGGGAGTTGGCCCCCACGAAGCT
GTTCCTCCTGGAGGCCCGGAGAGGCTTCGCGAAGGGGAAGAAATCGAAGGATGATGGTCG
AGGCGATACAGTTCAGGATGCTCCTGACATTGGACCGACTGTCAAATCTGCTGCAACTCA
GCAGATGGAGGCAGCCGTTGTTGCATTGTCACGGGAGCTTAGTAAATTGCGAACGGGAAG
AGCTTCTCCTGGTATGCTTGATCACATCATGGTGGAGACTACAGGTGTTAAGGTTGCGTT
GAATCGCTTGGCCGTTGTTTCTGTCCTTGATGCACATACCCTATCAGTGATGCCTTATGA
TCCGAGTTCAATGAAGTCTATTGAGCATGCGATCATCTCATCTCCATTGGGCATCAATCC
AACACCTGATGGCAACAGGATCATAGCAAACATCCCACCGTTGACAAAGGAGAATATACA
GGCACTGTGTAAGGTTGTCACTAAATCTGCCGAGGATTTCAAACAAAGTATTAGACGAGC
GCGCCAAAAGGCACTTGATACGATAAAGAAATCTGCGTCTGGTATGCCGAAGGATGATGT
AAAACGACTTGAGAAGGAGGTTGAAGAATTGACCAAGAAGTTCATAAAGTCAGCAGATGA
TATGTGCAAGGCTAAGGAGAAGGAAATCTCTGGAAACTGAGGACGTTAATCTGGCAGAAG
TTTTTTCTTTTACTTACACAACTTTGATGCCAACGAGTTCACGGGTTGCAATTCTGCAGC
AGCCGGGAAGATATATCTTTTTTGTTTGTGCCCGTTCTAACTATGATGTTAGAAATTCGA
AACAGTGTGATACCAAGGGCGGCCTGCCCAGCTTGTGACAAAACATTGATTCGGTTGCAA
GGCACTCATGAATTCACGAATCGAGAATGAGTTTACCCTAATGTGTGC