Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0489600-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:24461187:24468929:1 gene:Os04g0489600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 111 description:Hypothetical conserved gene. (Os04t0489600-01);Helix-loop-helix DNA-binding domain containing protein. (Os04t0489600-02)
Sequence	ATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGTCGGCG CGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGGGGGGC GCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGCCGCCG GAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGATCTCG CTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCGAGGCG AAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCTCGCCT CCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTTCTCATCGAGTGCTAGACCAGCA GGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACAACAAG AAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCTCCCAG ATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATCATCAT GGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCTCCGGT GGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGACGGGC AAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAATCTCAG CTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACGACCAG GTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCGCAGAG AGGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGCCCAAC ATGGACAAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCAAGGGA CTGCAGAGCCAGCTGCAGACTCTGAAGGAAGACAAGGAGAAATGCACCTGCAGCTGCAAG CAAGCATCAAGGAACAGACCAGCCGACTAA

Peptide Sequence

PEP ID	Os04t0489600-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:24461187:24468929:1 gene:Os04g0489600 transcript:Os04t0489600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 111 description:Hypothetical conserved gene. (Os04t0489600-01);Helix-loop-helix DNA-binding domain containing protein. (Os04t0489600-02)
Sequence	MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATARTFFPVPGGGGEQQPP ERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKDGGGGGDQSGFLTRHNSSP PGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSRQGSGGLSQ ISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTG KSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAE RERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEKCTCSCK QASRNRPAD

Transcript Sequence

Transcript ID	Os04t0489600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24461187:24468929:1 gene:Os04g0489600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 111 description:Hypothetical conserved gene. (Os04t0489600-01);Helix-loop-helix DNA-binding domain containing protein. (Os04t0489600-02)
Sequence	AGTCGCTCGCTCGCTCGCTGGCTGACTGCGCCCGCGCCCGCTTTGCTGCGCTCCCCCGGC ACGCGACGACGAAAAGACCGGCCTCAAAAGCGACACCACGCAGCAGACGCAGCGCCCCCG CGCGGAGAAGCTAGCTAGGTACTCCTGTCTGGTTAGCTAGCTAGCTATAGCTAGAAGCCT AGCACATGAACCCGGCGCCGTCGAGGGCGCCGCAGCGGCAGCAGCGCGGAGGGGAGATGT CGGCGCGCTACGGCGGCGGGCTGCAGTTCTTCGCTGACGCCCCGCCGGCGGGGGTGGAGG GGGGCGCCGCGACCGCGCGGACGTTCTTCCCGGTGCCGGGCGGGGGAGGGGAGCAGCAGC CGCCGGAGCGCGCGATGAGGCAGCAGCACTACGGCGGCGGCGGGAGTGGTGCGGCCGAGA TCTCGCTGGGGCACGGCCACGGCCACGGCGGCAAGCACCATTTCCATCAGTTCGGCGTCG AGGCGAAGGACGGTGGCGGCGGCGGCGACCAGTCGGGGTTTCTGACGCGGCACAACAGCT CGCCTCCCGGGTTCTTCTCGAGCCCCGTCATGGACAACGGTTTCTCATCGAGTGCTAGAC CAGCAGGATCATCACTCGGTGAGGTTCGCCATGGCGCCATGAGCAGCAGCAGCAACAACA ACAAGAAGATGAAGGCCCCACTGAGCTTCGCTAGCAGCAGGCAGGGCTCCGGCGGCCTCT CCCAGATATCCGAGGACGGCATCCCGGACCTCACTGACAGCATCCATGGCGCCGCTCATC ATCATGGGCGCTCCGAGGAGAACGTCTCCACCCACGACCACGTCGTCCGCTCCTTCTCCT CCGGTGGGTTCTCGATCGGGTCATGGGAGGACTCCAACTCCATCGTGTTCTCCACGTCGA CGGGCAAATCAGGAGCGCACGGCAACGACGACATCATCGCCACCCTTAGCAACTACGAAT CTCAGCTTGTTGCGCCCAGGGAGATGGCTGGCGTAGAGAAATACCTGCAGATGCAGCACG ACCAGGTGCCATTCAGAGTACGGGCCAAGCGTGGATGCGCGACGCACCCACGGAGCATCG CAGAGAGGGAGAGAAGAACGAGGATCAGCGAGAAGCTCAGGAAGTTGCAGGCCCTGGTGC CCAACATGGACAAGCAAACGAGTACTTCAGACATGCTGGACTTAGCAGTTGATCACATCA AGGGACTGCAGAGCCAGCTGCAGACTCTGAAGGAAGACAAGGAGAAATGCACCTGCAGCT GCAAGCAAGCATCAAGGAACAGACCAGCCGACTAAAATGGGATGTGAAGCAAATTGCAGT GCTGGCTAGTTTGATGACATTTCTCCTTGGTCCTCAAAACATGTTTGCCTGGCGACAGGA AATTAAAGGTATAGCAGGCAGCATATAGCGTGACAAGAGCAAAGTAATGGAGGTCATCAG TCTCTTCCAAACGAAAGGTCGAAGTCGTCTGATCAAACCTTTACCAGTGAATCGATCAGT CCAGTCTTTTTTCTTTTGTCAGTGTGACCAACCCCTTTTGTTGAGCTGTAAAATTAATTG AAACTAGACTAGAATTGTTCCTTCCTTTAACAAGGAGCTCTGCTGCTCTGGATGTTAGGC TTCTAGCTGTCCTGTTGCTGTGGTAAATAGTGATTGGTTCACCCAGCGGTTAGCAAATAA TCTGGTTGCTGGTTTCAGGGTATTCTCCGGCCAACATTAGACAAGATTCAGTGATGTGTT ATGATTCATACAGATC