Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0488100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24379793:24386400:1 gene:Os04g0488100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD21-2 PROTEIN description:Rad21/Rec8 like protein, C-terminal domain containing protein. (Os04t0488100-01)
Sequence	ATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGGTGGCG GCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCGTCGCC TGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGGGACTG CTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATGAATGC AATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAACTGGA GGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGATTAGTT GTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAACTAGA GCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACACCTGAT CTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGATTCCT GAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCATGTTG GAAGATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACATGCTCA TACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTGAAATG ATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTGAACCT GAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCACCTGAG ATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGAAAAAA CCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTTTGTCA GGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAAGTCGT GATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTAACACA AATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGCGCTGT AAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGGGTGGC ACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGAAGCAC CGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAGATAGA GGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATATTGTT CTACCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGCAGAGA AGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTCTGCCA GTTACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACACTATT ACAGCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGACTTTCG TTGGAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTGAAAGC ATTCCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGGCAACT GTTGGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTAATGAC GATACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCATTCAACAGAACTG CAAGAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGGATGCT GATATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATGAAGGT TTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCGTGGAC CAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAACGAAA AGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTCTCATA GAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGCTCGAG GCGGCATTGCGGAGTAGTGAGAAGCAATGA

Peptide Sequence

PEP ID	Os04t0488100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24379793:24386400:1 gene:Os04g0488100 transcript:Os04t0488100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD21-2 PROTEIN description:Rad21/Rec8 like protein, C-terminal domain containing protein. (Os04t0488100-01)
Sequence	MSCSKVLLSKKGVLGTVWVAAVSGVAALSRDQVVRTNVVACVDKILPDDNDKTTYRVLGL LLLGIVRIYSKKVEYLCHECNELLGSYGSAHCNELSIPTGGATNRVSKQAKKPVRARRLV VRQEGAYKVKIPMQAVRTTRAETRATSQITEVRDTHATPDLPTFTIPKRFELDSFDLGIP EDRDDDDVDHHQLPHQGTMLEDENHHTSCLFESYKMMTCSYADLDSACIMPVRVTIPTEM MSVISEVNSLLCLSSIGGEPENHNAESACFTPVKDILPPEMVDMMAEVNDPSDKSTRGKK PQRELNRDENGNSACHIPLSGSKEVQIPENIVENVTFPSRDANCPTIEESENGSLHGTNT NPSCDGFEEPGSLEQPTLRCKTKLINELSPSTPEPMTEGGTGLPCSPKFMVTTPAKKEKH RVTRKRRRGLYNKDYIPTDRGDKRKVRRRGTWVLYDENIVLPNETLRNTIEDASDLVQQR RKAPHTCLYTWKEGKIRSLPVTFMDPLILYPTSVYVRHTITADTPENSCRESVKSRRRLS LELSESNNICDDAKNVEGESIPDEPRKRKLDELTDSVQATVGCYTESAQYHNDEDYRFND DTVKEKDFSIGGHESHSTELQERLNALKSKNPQLDEALDADIDSMEEDTHMDEQHARDEG LLRSTRTRTVARYFHQLLVDQKCQQRNNSVCLGQALEGTKRKTSARFFYETLILKSGSLI EVNQEQTYGDIIVSATPRLEAALRSSEKQ

Transcript Sequence

Transcript ID	Os04t0488100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24379793:24386400:1 gene:Os04g0488100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD21-2 PROTEIN description:Rad21/Rec8 like protein, C-terminal domain containing protein. (Os04t0488100-01)
Sequence	GCTCTCCCTTCGCCTCGCCTCGCCTCTCCTCCAAGAGCGCAACCGTAAAAAAAGAAAAAG AAAAAAAAAACCCGAGGCGGCGAGCTCTCGGGCTGCTTCCGGCTCCGTCCGTAGCGGCGA GGAGGGGGCGGAGGGCCATTGGCGCGGCGGCCCGCGCGAGGCGCGCTTGCATTGTTGGTG GCGGCGGCGGGGGGTCGACGGGGTGGAGGGCGTGTTTTTTTGTTGGCTTGGGGTGGAGGC GGGGGATGTCTTGCTCGAAGGTGCTTCTGTCGAAGAAGGGGGTGCTGGGGACGGTGTGGG TGGCGGCGGTCAGCGGCGTGGCGGCGCTCAGCCGGGACCAGGTGGTTCGCACCAACGTCG TCGCCTGCGTCGATAAGATTTTGCCTGATGACAACGACAAAACCACATACAGAGTATTGG GACTGCTTCTGCTTGGCATTGTTAGGATTTATTCCAAGAAAGTGGAATACCTCTGCCATG AATGCAATGAGCTTCTTGGATCATATGGATCAGCACATTGCAATGAACTAAGTATCCCAA CTGGAGGAGCAACAAATAGAGTTTCAAAGCAAGCGAAGAAACCTGTTCGCGCAAGAAGAT TAGTTGTAAGACAAGAAGGTGCTTACAAGGTAAAAATACCTATGCAAGCTGTGCGAACAA CTAGAGCAGAAACAAGAGCTACTTCACAGATAACTGAAGTTCGAGACACACATGCTACAC CTGATCTTCCAACTTTCACAATACCCAAAAGATTTGAGCTTGACTCTTTTGATTTGGGGA TTCCTGAAGATAGGGATGATGATGACGTGGATCATCACCAATTGCCACATCAAGGTACCA TGTTGGAAGATGAGAATCACCATACATCCTGTTTGTTTGAGTCTTATAAGATGATGACAT GCTCATACGCTGATCTAGACTCTGCCTGCATTATGCCAGTACGCGTCACTATCCCAACTG AAATGATGAGTGTCATTAGTGAAGTCAACAGTCTACTATGCTTGAGTAGCATTGGGGGTG AACCTGAAAATCACAATGCTGAATCTGCTTGCTTTACACCAGTGAAGGATATTCTTCCAC CTGAGATGGTGGATATGATGGCTGAAGTAAATGATCCTTCAGATAAAAGCACAAGGGGGA AAAAACCTCAAAGAGAATTGAATAGGGATGAGAATGGGAATTCTGCTTGCCACATCCCTT TGTCAGGAAGTAAGGAAGTGCAAATACCTGAAAATATTGTGGAGAATGTGACTTTTCCAA GTCGTGATGCAAATTGTCCCACAATTGAAGAATCAGAAAATGGGTCACTGCATGGAACTA ACACAAATCCATCATGTGATGGTTTTGAGGAACCCGGGTCTCTTGAACAACCAACTTTGC GCTGTAAGACAAAGCTAATCAATGAGCTGTCACCTTCCACTCCGGAGCCCATGACAGAGG GTGGCACAGGGCTACCCTGCTCTCCTAAATTTATGGTTACTACACCAGCTAAAAAGGAGA AGCACCGGGTGACTAGAAAACGAAGAAGGGGATTATACAATAAAGATTATATACCAACAG ATAGAGGAGACAAACGGAAGGTTAGAAGAAGAGGAACATGGGTATTGTATGATGAAAATA TTGTTCTACCAAATGAAACATTGAGAAACACAATAGAGGATGCAAGTGATCTAGTGCAGC AGAGAAGGAAGGCACCTCATACTTGTCTTTATACCTGGAAGGAGGGCAAAATTCGTTCTC TGCCAGTTACTTTCATGGATCCATTGATTTTGTATCCAACTTCGGTGTACGTTAGACACA CTATTACAGCAGATACACCAGAAAATTCGTGCAGGGAGTCAGTAAAATCAAGAAGGCGAC TTTCGTTGGAGCTTTCTGAATCCAACAATATCTGCGATGATGCTAAAAATGTAGAAGGTG AAAGCATTCCAGATGAACCAAGAAAGAGAAAATTGGATGAATTGACAGATAGTGTACAGG CAACTGTTGGGTGTTACACTGAAAGTGCACAGTATCACAATGATGAAGACTATAGATTTA ATGACGATACAGTCAAAGAAAAGGATTTCTCAATTGGAGGACATGAATCTCATTCAACAG AACTGCAAGAAAGATTGAATGCATTGAAAAGTAAAAATCCACAGCTCGACGAGGCATTGG ATGCTGATATAGATAGTATGGAAGAGGATACTCATATGGATGAACAACATGCTAGAGATG AAGGTTTGCTGCGTTCAACAAGAACAAGGACTGTAGCAAGGTACTTCCATCAACTACTCG TGGACCAGAAGTGCCAACAACGGAACAATTCTGTATGCCTTGGTCAAGCACTCGAAGGAA CGAAAAGAAAAACTTCAGCAAGATTCTTCTATGAAACTCTGATCCTGAAGAGTGGTAGTC TCATAGAAGTCAATCAAGAGCAGACTTATGGGGACATCATAGTCTCAGCGACTCCGCGGC TCGAGGCGGCATTGCGGAGTAGTGAGAAGCAATGACTTAATTTGACGCAACATGTTCATT GGTAGTTTTCGGGAAAAAGAGATCCCAGCTTCCCAGGAGCGTTTCACCTTGTTTTATCTT CTGTAGCATGTTTATGATGGTCAGTCAGATGTATATACTTAGTTGGGCGCATGTAGCGCT AGATGGTTAGGAACATGTAGAGATGTTAGTTGTTTCCCCCTTTTTTTTCCCCTTTAGATG GATAGCTTAGTTATTTATAATAACTTTAACAGTTGTAAATTGCAGTTTCCTATCAGTGTT AGATCCCGTGTTCTTTTC