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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0486900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24321375:24325557:1 gene:Os04g0486900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os04t0486900-01)
Sequence

ATGGCCGCCGCCGCCGCCGTGGTGAACTACCCGCTCGTCGCGGCGCTCGTGGCGTTCGCG
CTCGCGCAGTCCTCCAAATTCTTCACCACCTGGTTTAAAGAGAAGCGTTGGGATGCCAGG
CAACTTATAGCTTCTGGGGGGATGCCATCATCCCACTCAGCCACAGTGACAGCGCTTGCA
GTGGCCATAGGAATCCAAGAAGGCTATCGTAGCGCCACCTTTGCAACTTCAGTAATTATT
GCATGTGTGGTGATGCATGATGCTTTTGGAGTTCGCTTACATGCTGGGAAGCAGGCAGAG
GTATTGAATCAAATTGTGTACGAGCTACCAGAAGAGCATCCATTATCAGAGACAAAGCCA
TTGCGTGAAATTCTTGGACACACAGTTCCTCAGGTTGTGGCCGGTTGCATCATTGGAATC
CTTATAGCTGTTGTTATGCGCTTAGCTCTATGGAGTTCTTAG

Peptide Sequence

PEP ID

Os04t0486900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24321375:24325557:1 gene:Os04g0486900 transcript:Os04t0486900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os04t0486900-01)
Sequence

MAAAAAVVNYPLVAALVAFALAQSSKFFTTWFKEKRWDARQLIASGGMPSSHSATVTALA
VAIGIQEGYRSATFATSVIIACVVMHDAFGVRLHAGKQAEVLNQIVYELPEEHPLSETKP
LREILGHTVPQVVAGCIIGILIAVVMRLALWSS

Transcript Sequence

Transcript ID

Os04t0486900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24321375:24325557:1 gene:Os04g0486900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Acid phosphatase/vanadium-dependent haloperoxidase related family protein. (Os04t0486900-01)
Sequence

AAAAAGGAAAAAAAAATCAATAAACCCCAGAAGAAGCCTCTCCTCCTCTCGACTCCTCTC
CTCGCCGCTCTCGTTGCTTCCTCGCGGGGAGTTGGAACCCCCTCCCCTCTCCCTCTCCCT
CTCGCTGACTCGCTCTTCGAGGAGAAGGCGAAGGCTCCCGCGCCGCGGAGTCGGAGATGG
CCGCCGCCGCCGCCGTGGTGAACTACCCGCTCGTCGCGGCGCTCGTGGCGTTCGCGCTCG
CGCAGTCCTCCAAATTCTTCACCACCTGGTTTAAAGAGAAGCGTTGGGATGCCAGGCAAC
TTATAGCTTCTGGGGGGATGCCATCATCCCACTCAGCCACAGTGACAGCGCTTGCAGTGG
CCATAGGAATCCAAGAAGGCTATCGTAGCGCCACCTTTGCAACTTCAGTAATTATTGCAT
GTGTGGTGATGCATGATGCTTTTGGAGTTCGCTTACATGCTGGGAAGCAGGCAGAGGTAT
TGAATCAAATTGTGTACGAGCTACCAGAAGAGCATCCATTATCAGAGACAAAGCCATTGC
GTGAAATTCTTGGACACACAGTTCCTCAGGTTGTGGCCGGTTGCATCATTGGAATCCTTA
TAGCTGTTGTTATGCGCTTAGCTCTATGGAGTTCTTAGACACGCATTACTCGTAGGTATT
TGCTTGATCACCTCATATCGCATCGCTGATGAGTTGTGAAGCATGAAAACTCAAATCTCC
TCTTGGATGTGATTTGTACAAATGCTCAGTTTTATGACTATACTATAAGGTTCCTAACCG
GTGTAGGTCTGCGTTGTAGGAGGTAGATTGTAGTTCAGTTGGTGCTGTACATCGTAGAAA
TTTACTGTGAATTGGAAGCTCATGTGATCAACCTTTGTTATACAACTGGCAATGATCATG
CTGTCAACTTTTCTTTCTGGC