Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0486600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24305454:24309055:1 gene:Os04g0486600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2 description:Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12). (Os04t0486600-01);Similar to Glyceralde-3-phosphate dehydrogenase. (Os04t0486600-02)
Sequence	ATGGCGAAGATTAAGATCGGGATCAATGGGTTCGGGAGGATCGGGAGGCTCGTGGCCAGG GTGGCCCTGCAGAGCGACGACGTCGAGCTCGTCGCCGTCAACGACCCCTTCATCACCACC GACTACATGACATACATGTTCAAGTATGACACTGTGCACGGCCAGTGGAAGCATCATGAG GTTAAGGTGAAGGACTCCAAGACCCTTCTCTTCGGTGAGAAGGAGGTCACCGTGTTCGGC TGCAGGAACCCTGAGGAGATCCCATGGGGTGAGACTGGCGCTGAGTTTGTTGTGGAGTCC ACTGGTGTTTTCACTGACAAGGACAAGGCCGCTGCTCACCTGAAGGGTGGTGCTAAGAAG GTCGTCATCTCTGCTCCCAGCAAGGATGCCCCCATGTTTGTTGTTGGTGTCAATGAGAAG GAGTACAAGCCTGACATCGACATTGTGTCCAATGCTAGCTGCACCACCAACTGCCTTGCT CCACTTGCCAAGGTTATCAATGACAGGTTTGGTATTGTTGAGGGTTTGATGACCACTGTC CATGCAATCACTGCAACTCAGAAGACCGTTGATGGACCCTCGAGCAAGGACTGGAGGGGT GGAAGGGCTGCCAGTTTCAACATCATCCCTAGCAGCACTGGAGCTGCAAAGGCTGTCGGC AAGGTGCTTCCTGCTCTCAATGGAAAGTTGACTGGTATGGCTTTCCGTGTTCCAACCGTG GATGTCTCTGTCGTTGATTTGACTGTCAGGCTTGAGAAGCCAGCATCCTATGATCAGATT AAGGCAGCTATCAAGGAGGAGTCTGAGGGGAAACTCAAGGGTATTCTGGGTTACGTTGAG GAGGACCTTGTTTCCACAGACTTCCAGGGTGACAACAGGTCAAGCATCTTTGATGCAAAG GCCGGTATTGCTCTCAATGACAACTTTGTTAAGCTTGTGTCTTGGTATGACAACGAATGG GGATACAGCTCTCGCGTTGTTGACCTGATCCGTCACATGTACAACACCCAGTAG

Peptide Sequence

PEP ID	Os04t0486600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24305454:24309055:1 gene:Os04g0486600 transcript:Os04t0486600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2 description:Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12). (Os04t0486600-01);Similar to Glyceralde-3-phosphate dehydrogenase. (Os04t0486600-02)
Sequence	MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKK VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ

Transcript Sequence

Transcript ID	Os04t0486600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24305454:24309055:1 gene:Os04g0486600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glyceraldehyde-3-phosphate dehydrogenase, cytosolic GAPDH2, cytosolic glyceraldehyde-3-phosphate dehydrogenase 2 description:Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 (EC 1.2.1.12). (Os04t0486600-01);Similar to Glyceralde-3-phosphate dehydrogenase. (Os04t0486600-02)
Sequence	ATTCCTCGCGTCGCATCGCACTTGTAGCTCTCGACCCCCGCATCTCATCCCTCCTCTCGC TTAGTTCAGATCGAAATCGCAAATGGCGAAGATTAAGATCGGGATCAATGGGTTCGGGAG GATCGGGAGGCTCGTGGCCAGGGTGGCCCTGCAGAGCGACGACGTCGAGCTCGTCGCCGT CAACGACCCCTTCATCACCACCGACTACATGACATACATGTTCAAGTATGACACTGTGCA CGGCCAGTGGAAGCATCATGAGGTTAAGGTGAAGGACTCCAAGACCCTTCTCTTCGGTGA GAAGGAGGTCACCGTGTTCGGCTGCAGGAACCCTGAGGAGATCCCATGGGGTGAGACTGG CGCTGAGTTTGTTGTGGAGTCCACTGGTGTTTTCACTGACAAGGACAAGGCCGCTGCTCA CCTGAAGGGTGGTGCTAAGAAGGTCGTCATCTCTGCTCCCAGCAAGGATGCCCCCATGTT TGTTGTTGGTGTCAATGAGAAGGAGTACAAGCCTGACATCGACATTGTGTCCAATGCTAG CTGCACCACCAACTGCCTTGCTCCACTTGCCAAGGTTATCAATGACAGGTTTGGTATTGT TGAGGGTTTGATGACCACTGTCCATGCAATCACTGCAACTCAGAAGACCGTTGATGGACC CTCGAGCAAGGACTGGAGGGGTGGAAGGGCTGCCAGTTTCAACATCATCCCTAGCAGCAC TGGAGCTGCAAAGGCTGTCGGCAAGGTGCTTCCTGCTCTCAATGGAAAGTTGACTGGTAT GGCTTTCCGTGTTCCAACCGTGGATGTCTCTGTCGTTGATTTGACTGTCAGGCTTGAGAA GCCAGCATCCTATGATCAGATTAAGGCAGCTATCAAGGAGGAGTCTGAGGGGAAACTCAA GGGTATTCTGGGTTACGTTGAGGAGGACCTTGTTTCCACAGACTTCCAGGGTGACAACAG GTCAAGCATCTTTGATGCAAAGGCCGGTATTGCTCTCAATGACAACTTTGTTAAGCTTGT GTCTTGGTATGACAACGAATGGGGATACAGCTCTCGCGTTGTTGACCTGATCCGTCACAT GTACAACACCCAGTAGAAGATGGTCACTCTTTCGGAAGAAATGGAGTAGAGTGCTACTGA AAATAAGTCGGACCTTTTGCGAGCTACTCCAGTAGAGCTTCATTAGCTGTATGCTGCCTT TTGTTTTTGCTGGCTTTTCGCATGATGTTTTATTAAAACTCGATGTAATGTTAATTTGTG TACTTCATCTCCGGCACTTTATAAATCGTGGTTTTTGAATTTGAAAGTTCAAGTGGCATT AGACG