Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0485000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24240921:24243702:1 gene:Os04g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 7 description:Similar to 26S proteasome subunit RPN7. (Os04t0485000-01)
Sequence	ATGGACGGCGGCGTAGGCGAGGAAGGGAAGCAGCAGCCGCACCTGGTGCTGGCGCACAAG CTGTTCCTGCTCTCGCACCCGGACGTGGACGACCTCGCCAAGGTCGACCTCCGCGCCGAT GTCCTCGCCGCAGTCAAATCCGATGATATGGCGTCTCTGTACGAGTCGCTGGGGGCCGGC GGCGTGCTGGAGACGGACGCTGCGCTGCTCGCGGAGATGCGCGGCAGGATCGAGGAGGAG ATCCGGAAGCTTGACGAGAAGATCGCTGATGCTGAAGAGAATTTGGGTGAGAGTGAAGTG CGTGAAGCCCATCTAGCCAAATCGTTGTATTTCATAAGGGTTGGAGAGAAGGAGAAGGCA CTAGAACAGCTTAAAGTTACTGAAGGAAAAACTGTAGCTGTTGGGCAAAAGATGGACCTT GTTTTCCACACTTTACAGATTGGGTTTTTCTATATGGATTTTGATCTCATCTCTAAGTCT ATTGACAAAGCCAAAAAATTGTTTGAGGAGGGTGGTGATTGGGAGAGGAAGAACAGATTG AAAGTGTACGAGGGCTTATACTGCATGGCCACTAGAAACTTCAAGAAAGCTGCAAGCTTA TTTTTGGATTCAATTTCAACATTCACAACCTATGAGTTGTTCCCCTATGATACATTCATA TTCTACACAGTTCTTACAAGTGTTATCTCATTGGATCGTGTATCCCTAAAGGCAAAGGTT GTAGATGCACCTGAGATCCTGGCTGTAATTGGCAAAGTACCTCACCTCTCTGAGTTTCTC AACTCCCTCTACAATTGCCAGTACAAGTCATTTTTTGCCGCATTCTCTGGCTTGACGGAG CAGATCAAGTTAGACCGTTACCTGCAGCCTCATTTCCGTTACTACATGCGTGAAGTCCGT ACTGTTGTCTATTCACAATTCCTCGAGTCCTACAAGAGTGTGACGATGGAAGCAATGGCT TCTGCATTTGGTGTGACCGTTGATTTCATAGACCTGGAATTGTCACGCTTCATTGCTGCT GGAAAGCTCCACTGCAAGATCGATAAGGTTGCTTGCGTCCTGGAGACGAACCGGCCTGAT GCCAGAAATGCTTTCTACCAGGCAACCATCAAGCAAGGGGACTTCCTGCTGAACCGCATC CAGAAGCTATCACGAGTCATTGACCTGTAG

Peptide Sequence

PEP ID	Os04t0485000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24240921:24243702:1 gene:Os04g0485000 transcript:Os04t0485000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 7 description:Similar to 26S proteasome subunit RPN7. (Os04t0485000-01)
Sequence	MDGGVGEEGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAG GVLETDAALLAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKA LEQLKVTEGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRL KVYEGLYCMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKV VDAPEILAVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVR TVVYSQFLESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPD ARNAFYQATIKQGDFLLNRIQKLSRVIDL

Transcript Sequence

Transcript ID	Os04t0485000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24240921:24243702:1 gene:Os04g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 7 description:Similar to 26S proteasome subunit RPN7. (Os04t0485000-01)
Sequence	GGAGGACGAAACTAGCCTTCTCTCCTTCTCTCTCGTGTTCTCTCCCAATCTCTTCTTGCG GCGGAAGCAAAGCGAGAAGCGAGGCGACTCTTCTCCGGCGGCGGCGGCGGCGGAAGCGGC GGCGAGATGGACGGCGGCGTAGGCGAGGAAGGGAAGCAGCAGCCGCACCTGGTGCTGGCG CACAAGCTGTTCCTGCTCTCGCACCCGGACGTGGACGACCTCGCCAAGGTCGACCTCCGC GCCGATGTCCTCGCCGCAGTCAAATCCGATGATATGGCGTCTCTGTACGAGTCGCTGGGG GCCGGCGGCGTGCTGGAGACGGACGCTGCGCTGCTCGCGGAGATGCGCGGCAGGATCGAG GAGGAGATCCGGAAGCTTGACGAGAAGATCGCTGATGCTGAAGAGAATTTGGGTGAGAGT GAAGTGCGTGAAGCCCATCTAGCCAAATCGTTGTATTTCATAAGGGTTGGAGAGAAGGAG AAGGCACTAGAACAGCTTAAAGTTACTGAAGGAAAAACTGTAGCTGTTGGGCAAAAGATG GACCTTGTTTTCCACACTTTACAGATTGGGTTTTTCTATATGGATTTTGATCTCATCTCT AAGTCTATTGACAAAGCCAAAAAATTGTTTGAGGAGGGTGGTGATTGGGAGAGGAAGAAC AGATTGAAAGTGTACGAGGGCTTATACTGCATGGCCACTAGAAACTTCAAGAAAGCTGCA AGCTTATTTTTGGATTCAATTTCAACATTCACAACCTATGAGTTGTTCCCCTATGATACA TTCATATTCTACACAGTTCTTACAAGTGTTATCTCATTGGATCGTGTATCCCTAAAGGCA AAGGTTGTAGATGCACCTGAGATCCTGGCTGTAATTGGCAAAGTACCTCACCTCTCTGAG TTTCTCAACTCCCTCTACAATTGCCAGTACAAGTCATTTTTTGCCGCATTCTCTGGCTTG ACGGAGCAGATCAAGTTAGACCGTTACCTGCAGCCTCATTTCCGTTACTACATGCGTGAA GTCCGTACTGTTGTCTATTCACAATTCCTCGAGTCCTACAAGAGTGTGACGATGGAAGCA ATGGCTTCTGCATTTGGTGTGACCGTTGATTTCATAGACCTGGAATTGTCACGCTTCATT GCTGCTGGAAAGCTCCACTGCAAGATCGATAAGGTTGCTTGCGTCCTGGAGACGAACCGG CCTGATGCCAGAAATGCTTTCTACCAGGCAACCATCAAGCAAGGGGACTTCCTGCTGAAC CGCATCCAGAAGCTATCACGAGTCATTGACCTGTAGGTGTTAGTGTTGGAGCTGGTGCTT GCCAAAACTCTGCTCGAGCTCCCCCGCACGAGTAACTTATTTGCTTTGGTCCCAGGGGAC TACGAACAGTACTTGACTTCGCATTCGAAGTAGGTTACGAGGAAAGAGAGCTTAACAAAA TCAGCGTTAAATCTGAGAATTTGAGCTTATGTAACCTACTATATGGATCGATGAAAGTTC AGACCCGTTGTTTCT