Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0483600-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:24180805:24185070:-1 gene:Os04g0483600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch-type beta propeller domain containing protein. (Os04t0483600-01);Hypothetical conserved gene. (Os04t0483600-02)
Sequence

CATGATCTGATCTGCATTTTTTTTATAATATCCTTCTGCAGATACTACAATGACTTACAT
GTTTTTGATTTAGATAATTTCAAGTGGGAGGAGATCAAGCCTCGCCCTGGGTGCTTGTGG
CCAAGTCCAAGAAGTGGCTTTCAGCTAATGGTATACCAAGATCAGATATATCTGTATGGC
GGATATTTTAAAGAAGTAGTTTCTTCTGACAAATCTGCATCAGAAAAAGGAACAGTTCAT
GCAGATATGTGGACTCTTGATCCTCGTACTTGGGAGTGGAATAAGGTTAAGAAAACTGGG
ATGCCACCTGGCCCCAGAGCTGGGTTTTCTATGTGCGTTCACAAGAAAAGGGCTGTTCTT
TTCGGTGGTGTGGTAGATATGGAAATTGAAGGGGATGTCATTATGAGCATGTTTATGAAT
GAGCTCTATGGTTTCCAGCTGGACAACCATCGCTGGTATCCTTTAGAGCTCAGGAAAGAC
AAGCCTGCTAAAAATAAGACAAAGGACATCAAAAGAAAAGAACCATCGAACAATGTGGAA
GATAATCTTGGTAATGAGGAGGATGAGATCATGGAGGACTCAGAAACTACTGGAGGGCAA
TCCGAAGTCCATGGGGTTTCGAATCACTTGACCAAGAGTCTAACCTTAAATAAAGCTGGC
TCAGGCAATAGCTCTGATATTCTCTCTGATTCGACAACACAAGAAGTACTCCCAGAGGCA
GTGAAACCCGGTGGTCGGATCAATGCATGCTTGGCTGTAGGGAAAGATACACTCTATTTA
TATGGAGGAATGATGGAATTGAAAGATAGAGAAATTACTCTTGATGATATGTATTCACTT
AACCTTAGCAAACTAGATGAGTGGAAGTGTATCATACCGGCATCTGAATCTGAATGGCTA
GAAATTTCTGAAGATGAGGATGATGAAGATGATGATGATGATGATAATGAGAATGATAGC
GAGGATGACGCTAATCAGACCGATGAAGATGATGAAGAGTCTGATGAAGATGCCGAGAAG
AATGTCGATATGTCCACTGCTGTATCGCTAATAAAGGGTGAACGTAAGAACTTGCGAAGA
AAAGAGAAGCGTGCTCGGATAGAGCAAATTCGGGTTATGCTCGGTCTTTCTGATTCTCAA
AGGACTCCAATGGTGATGTTGTAA

Peptide Sequence

PEP ID

Os04t0483600-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:24180805:24185070:-1 gene:Os04g0483600 transcript:Os04t0483600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch-type beta propeller domain containing protein. (Os04t0483600-01);Hypothetical conserved gene. (Os04t0483600-02)
Sequence

HDLICIFFIISFCRYYNDLHVFDLDNFKWEEIKPRPGCLWPSPRSGFQLMVYQDQIYLYG
GYFKEVVSSDKSASEKGTVHADMWTLDPRTWEWNKVKKTGMPPGPRAGFSMCVHKKRAVL
FGGVVDMEIEGDVIMSMFMNELYGFQLDNHRWYPLELRKDKPAKNKTKDIKRKEPSNNVE
DNLGNEEDEIMEDSETTGGQSEVHGVSNHLTKSLTLNKAGSGNSSDILSDSTTQEVLPEA
VKPGGRINACLAVGKDTLYLYGGMMELKDREITLDDMYSLNLSKLDEWKCIIPASESEWL
EISEDEDDEDDDDDDNENDSEDDANQTDEDDEESDEDAEKNVDMSTAVSLIKGERKNLRR
KEKRARIEQIRVMLGLSDSQRTPMVML

Transcript Sequence

Transcript ID

Os04t0483600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24180805:24185070:-1 gene:Os04g0483600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch-type beta propeller domain containing protein. (Os04t0483600-01);Hypothetical conserved gene. (Os04t0483600-02)
Sequence

GTTAGTACAGTTACATTTTATATGACTCTACCCTGGTAATCTTGTTATTAGAGTAACATT
TATATTTGGACCATGTCTAGAAGTAGTGGAGTCATTATGTCCAAACTACAAATTATGCAC
TACCTGAATAACAGTGTAGCACTCTTACAGCTGATCATCCGCAAAGAATGAAATGGTGTG
GCGTAGAGTACGTTCTGAATAAATAGTGTGACATGACATGATCTGATCTGCATTTTTTTT
ATAATATCCTTCTGCAGATACTACAATGACTTACATGTTTTTGATTTAGATAATTTCAAG
TGGGAGGAGATCAAGCCTCGCCCTGGGTGCTTGTGGCCAAGTCCAAGAAGTGGCTTTCAG
CTAATGGTATACCAAGATCAGATATATCTGTATGGCGGATATTTTAAAGAAGTAGTTTCT
TCTGACAAATCTGCATCAGAAAAAGGAACAGTTCATGCAGATATGTGGACTCTTGATCCT
CGTACTTGGGAGTGGAATAAGGTTAAGAAAACTGGGATGCCACCTGGCCCCAGAGCTGGG
TTTTCTATGTGCGTTCACAAGAAAAGGGCTGTTCTTTTCGGTGGTGTGGTAGATATGGAA
ATTGAAGGGGATGTCATTATGAGCATGTTTATGAATGAGCTCTATGGTTTCCAGCTGGAC
AACCATCGCTGGTATCCTTTAGAGCTCAGGAAAGACAAGCCTGCTAAAAATAAGACAAAG
GACATCAAAAGAAAAGAACCATCGAACAATGTGGAAGATAATCTTGGTAATGAGGAGGAT
GAGATCATGGAGGACTCAGAAACTACTGGAGGGCAATCCGAAGTCCATGGGGTTTCGAAT
CACTTGACCAAGAGTCTAACCTTAAATAAAGCTGGCTCAGGCAATAGCTCTGATATTCTC
TCTGATTCGACAACACAAGAAGTACTCCCAGAGGCAGTGAAACCCGGTGGTCGGATCAAT
GCATGCTTGGCTGTAGGGAAAGATACACTCTATTTATATGGAGGAATGATGGAATTGAAA
GATAGAGAAATTACTCTTGATGATATGTATTCACTTAACCTTAGCAAACTAGATGAGTGG
AAGTGTATCATACCGGCATCTGAATCTGAATGGCTAGAAATTTCTGAAGATGAGGATGAT
GAAGATGATGATGATGATGATAATGAGAATGATAGCGAGGATGACGCTAATCAGACCGAT
GAAGATGATGAAGAGTCTGATGAAGATGCCGAGAAGAATGTCGATATGTCCACTGCTGTA
TCGCTAATAAAGGGTGAACGTAAGAACTTGCGAAGAAAAGAGAAGCGTGCTCGGATAGAG
CAAATTCGGGTTATGCTCGGTCTTTCTGATTCTCAAAGGACTCCAATGGTGATGTTGTAA
TCAACATTTTTTTTGTTCTAAATTTGTTTGAAGTTGTTCCGACAAAGTACATATACTTTG
TTTACTCAGAGGAACTCTTGGCTGATAATTTGTTACACACAGTTAACAATTAAAACCATA
TATCACTAATTCCCATATTCACACTTTTAAAGCCAGGAGAGTCACTAAAAGATTTCTACA
AGAGAACGGATATGTACTGGCAGATGGCTGCATATGAGCACACTCAACACACTGGAAAGG
AGCTCCGCAAAGATGGTTTTGATCTTGCCGAAACTCGATATAAGGAACTGAAACCCATAC
TCGACGAGCTGGCTGTGCTCGAGGCTGAACAGAAAGCTGAGGAAGAGGCTAGTGCTTCCA
CTAGTTCCAAGAAAGACACGAGGAAAAGCAAGCAGAAGAGTGGCATGAGATAGCTTTGGT
TCGAAATATCGAAATAGAGAGTGGTTTAGGCCAATGCTTTAAGCCATCTGGGATTTTTTC
CTTTCTGAGCCATTGGTCAGCTCGATCGATTAATCCACACGAGGTGCCTATAACTACCTG
TGTAGGTTGGCTTAATCCATGGTTAAAATTTTCCAACGTACTGTATTTGCGATTCCTCGG
AAGCATTCATGGAGAGATTGTACACAGTTCTATTCATCGGAAATTCGTTACTACGT