Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os04t0482800-01

CDS Infomation

cds chromosome:IRGSP-1.0:4:24134006:24138398:-1 gene:Os04g0482800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os04t0482800-01)

Sequence

ATGGCGGCGGAGGAGGGGGCGAGGTCGCCGACGAGGATGCTGGCGGAGGGGCACCTGCGG
GTGGCCACCGGCGGGGGCGCGCCGGCCGACGGCGGGATCGCCGTCCGCCACCTCCCACAC
CACCACGCATCTAAGAGAGGTGCTGGTGGGAAAAATGAACAATACAACCTTGAGGATGTA
GATTCTGTACCATCTAAGATGTCGAACAAACTAGTTAATGGGAACAATAAGGTTCCTGCT
ACATTAGATGACTATAAAAGGCTTTTAGTTCCTGTAATTGAGGAGTACTTTAGTACAGGA
GATGTGGAACTGGCAGCTTCTGAGTTAAGGAGTCTTGGATCTGATCAGTTCCACAGTTAC
TTTATCAAGAAGCTCATATCCATGGCAATGGATCGTCATGACAAAGAAAAAGAAATGGCG
TCAATTCTGTTGTCTGCGTTGTATGCGGATCTACTAGGCTCTTCCAAGATGAGTGAAGGT
TTTATGATGCTTCTTGAGTCAACAGAAGATCTATCTGTCGACATACCGGATGCTATTGAT
GTCTTGTCTGTTTTTGTTGCTCGTGCTGTTGTGGATGAAATACTGCCTCCTGTTTTCCTC
ACTCGAGCCAGAGCACTGCTTCCTGAATTTTCTAAAGGTATTGAAGTTCTGCAAGTTTCT
GAGAAAAGCTACTTGTCAGCCCCCCATCATGCTGAGCTAGTTGAGCGCAAGTGGGGTGGG
AGCACTCACTTTACTGTGGAAGAGGCGAAAAGGAGAATCCAGGATATTCTGAAGGAGTAT
ATTGAGAGTGGAGATATTGATGAAGCTTTTAGGTGTATAAGGGAGCTGGGCCTTCCATTT
TTCCATCATGAGGTTGTTAAACGCGCTCTCACCTTGAGCATGGAGAATCTGTCATCACAG
CCATTAATCCTGAAGCTGTTGAAGGAATCAACTGCAGGTTGCCTGATCAGTTCTAATCAA
ATGTCTAAGGGTTTTTGTCGGCTAGCAGAGAGTATTGATGATCTGAGCCTTGATATTCCT
TCTGCCAAGATTCTCTTTGACAAGCTGGTTCTGACTGCTACATCTGAAGGATGGCTTGAT
GCTTCATTCACTACATCTTCTGCCCCTAATGAAGATATGCGAAATGCAAGTGGTGAAAAG
ATCAAGCATTTCAAAGAAGAATCTGGACACATAATCCAAGAGTATTTTCTCTCAGATGAT
GTCCCAGAACTCATTATAAGCCTTCAAGAGCTTTCTGCCCCAGAGTACAATCCTATCTTC
CTCAAGAAGCTTATCACCCTCGCTATGGACAGAAAGAATAGGGAGAAGGAGATGGCTTCT
GCCCTGCTTTCTTCACTCAGCTTGGAACTTTTCTCCACTGATGACATCATGAAGGGATTC
ATATTGCTCCTGCAGTCAGCAGAAGACACTGCCCTCGACATTGTGGATGCTCCCAGTGAA
CTTGCCCTCTTCCTTGCCAGGGCAGTTATTGATGAAGTTCTGATTCCACTGAATTTGGAT
GAGATCGGTAACAGGCTTCGCCCTAACAGCAGTGGTAGTCAAACTGTCCAGATGGCTCGT
GCCCTTCTTGCTGCTCGCCACTCTGGTGAGAGGATACTGCGTTGCTGGGGTGGCGGCACT
GGCTGGGCTGTAGAAGATGCGAAGGACAAGATCGCAAAGCTCCTTGAAGAATACAATACT
GGCGGTGACTTGGGGGAGGCTTGCCAATGCATCCGTGACCTTGGAATGCCCTTCTTCAAC
CATGAAGTGGTGAAGAAAGCGCTTGTTATGGCAATGGAGAAGGAGAATGAAGCAAGGATC
TTGGCTCTGCTACAGGAGTGCTTCGGTGAGGGGCTGATAACAATCAACCAGATGACATTA
GGCTTCACTCGCGTCAAGGAAGGCCTCGATGATCTGATCCTCGACATCCCAAATGCACAG
GAGAAGTTTGGAGCATATGTGGATCTCGCAACTGAACGTGGATGGCTGCTTCCACCCTTC
GCCTAG

Peptide Sequence

PEP ID

Os04t0482800-01

PEP Infomation

pep chromosome:IRGSP-1.0:4:24134006:24138398:-1 gene:Os04g0482800 transcript:Os04t0482800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os04t0482800-01)

Sequence

MAAEEGARSPTRMLAEGHLRVATGGGAPADGGIAVRHLPHHHASKRGAGGKNEQYNLEDV
DSVPSKMSNKLVNGNNKVPATLDDYKRLLVPVIEEYFSTGDVELAASELRSLGSDQFHSY
FIKKLISMAMDRHDKEKEMASILLSALYADLLGSSKMSEGFMMLLESTEDLSVDIPDAID
VLSVFVARAVVDEILPPVFLTRARALLPEFSKGIEVLQVSEKSYLSAPHHAELVERKWGG
STHFTVEEAKRRIQDILKEYIESGDIDEAFRCIRELGLPFFHHEVVKRALTLSMENLSSQ
PLILKLLKESTAGCLISSNQMSKGFCRLAESIDDLSLDIPSAKILFDKLVLTATSEGWLD
ASFTTSSAPNEDMRNASGEKIKHFKEESGHIIQEYFLSDDVPELIISLQELSAPEYNPIF
LKKLITLAMDRKNREKEMASALLSSLSLELFSTDDIMKGFILLLQSAEDTALDIVDAPSE
LALFLARAVIDEVLIPLNLDEIGNRLRPNSSGSQTVQMARALLAARHSGERILRCWGGGT
GWAVEDAKDKIAKLLEEYNTGGDLGEACQCIRDLGMPFFNHEVVKKALVMAMEKENEARI
LALLQECFGEGLITINQMTLGFTRVKEGLDDLILDIPNAQEKFGAYVDLATERGWLLPPF
A

Transcript Sequence

Transcript ID

Os04t0482800-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24134006:24138398:-1 gene:Os04g0482800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Topoisomerase-like protein. (Os04t0482800-01)

Sequence

GCTCGCGTCCCCCGTTGCGTTGGCCCCCCTCTCTCTTCGCCTCGCCCCCGCGCGGCCGCA
CCGCTCGCCTGAGATCCGCGTCGGCGCTCGCCGTCTCCGCCTCCGATCTCCACAGGGCGG
GCGGAGGAGACCGCATAGGTGGGGGGGAGATGGCGGCGGAGGAGGGGGCGAGGTCGCCGA
CGAGGATGCTGGCGGAGGGGCACCTGCGGGTGGCCACCGGCGGGGGCGCGCCGGCCGACG
GCGGGATCGCCGTCCGCCACCTCCCACACCACCACGCATCTAAGAGAGGTGCTGGTGGGA
AAAATGAACAATACAACCTTGAGGATGTAGATTCTGTACCATCTAAGATGTCGAACAAAC
TAGTTAATGGGAACAATAAGGTTCCTGCTACATTAGATGACTATAAAAGGCTTTTAGTTC
CTGTAATTGAGGAGTACTTTAGTACAGGAGATGTGGAACTGGCAGCTTCTGAGTTAAGGA
GTCTTGGATCTGATCAGTTCCACAGTTACTTTATCAAGAAGCTCATATCCATGGCAATGG
ATCGTCATGACAAAGAAAAAGAAATGGCGTCAATTCTGTTGTCTGCGTTGTATGCGGATC
TACTAGGCTCTTCCAAGATGAGTGAAGGTTTTATGATGCTTCTTGAGTCAACAGAAGATC
TATCTGTCGACATACCGGATGCTATTGATGTCTTGTCTGTTTTTGTTGCTCGTGCTGTTG
TGGATGAAATACTGCCTCCTGTTTTCCTCACTCGAGCCAGAGCACTGCTTCCTGAATTTT
CTAAAGGTATTGAAGTTCTGCAAGTTTCTGAGAAAAGCTACTTGTCAGCCCCCCATCATG
CTGAGCTAGTTGAGCGCAAGTGGGGTGGGAGCACTCACTTTACTGTGGAAGAGGCGAAAA
GGAGAATCCAGGATATTCTGAAGGAGTATATTGAGAGTGGAGATATTGATGAAGCTTTTA
GGTGTATAAGGGAGCTGGGCCTTCCATTTTTCCATCATGAGGTTGTTAAACGCGCTCTCA
CCTTGAGCATGGAGAATCTGTCATCACAGCCATTAATCCTGAAGCTGTTGAAGGAATCAA
CTGCAGGTTGCCTGATCAGTTCTAATCAAATGTCTAAGGGTTTTTGTCGGCTAGCAGAGA
GTATTGATGATCTGAGCCTTGATATTCCTTCTGCCAAGATTCTCTTTGACAAGCTGGTTC
TGACTGCTACATCTGAAGGATGGCTTGATGCTTCATTCACTACATCTTCTGCCCCTAATG
AAGATATGCGAAATGCAAGTGGTGAAAAGATCAAGCATTTCAAAGAAGAATCTGGACACA
TAATCCAAGAGTATTTTCTCTCAGATGATGTCCCAGAACTCATTATAAGCCTTCAAGAGC
TTTCTGCCCCAGAGTACAATCCTATCTTCCTCAAGAAGCTTATCACCCTCGCTATGGACA
GAAAGAATAGGGAGAAGGAGATGGCTTCTGCCCTGCTTTCTTCACTCAGCTTGGAACTTT
TCTCCACTGATGACATCATGAAGGGATTCATATTGCTCCTGCAGTCAGCAGAAGACACTG
CCCTCGACATTGTGGATGCTCCCAGTGAACTTGCCCTCTTCCTTGCCAGGGCAGTTATTG
ATGAAGTTCTGATTCCACTGAATTTGGATGAGATCGGTAACAGGCTTCGCCCTAACAGCA
GTGGTAGTCAAACTGTCCAGATGGCTCGTGCCCTTCTTGCTGCTCGCCACTCTGGTGAGA
GGATACTGCGTTGCTGGGGTGGCGGCACTGGCTGGGCTGTAGAAGATGCGAAGGACAAGA
TCGCAAAGCTCCTTGAAGAATACAATACTGGCGGTGACTTGGGGGAGGCTTGCCAATGCA
TCCGTGACCTTGGAATGCCCTTCTTCAACCATGAAGTGGTGAAGAAAGCGCTTGTTATGG
CAATGGAGAAGGAGAATGAAGCAAGGATCTTGGCTCTGCTACAGGAGTGCTTCGGTGAGG
GGCTGATAACAATCAACCAGATGACATTAGGCTTCACTCGCGTCAAGGAAGGCCTCGATG
ATCTGATCCTCGACATCCCAAATGCACAGGAGAAGTTTGGAGCATATGTGGATCTCGCAA
CTGAACGTGGATGGCTGCTTCCACCCTTCGCCTAGGCGGTTAAACTTGATGAATCTTCTC
AATGTACATCTCCACCCCTGCTGTCTTTAGCACCATACCAAAAGTTTTCCTGTTCCTAGT
GTACTTGTTGTGTTACCGTATACCGGAGGATGATAGGTTGGTTGGCCGTGTTGGTACTTG
TTGAGGTAGTGTTCATCATTGGTTTGGTTTGGGAGTTTATGCCCTGGGAGAGTTATGAAT
AACCATATCGTTTCAGGTTATGACATGCTATGCAATGAACAATAGAGCTGTTCATGACCA
GTGGAATTTTTGTAATTAGCTGGCGATGGGCTTCCAGCTTCTGAAGCTCCGTCATTGTGA
ATGTGCTTGCCCATCTTTGCTGCT