Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0482700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24129561:24133261:-1 gene:Os04g0482700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525D09.10 protein. (Os04t0482700-01)
Sequence

ATGGCCGGGACGGGCGGAAGAACCGGCGAGCCGGAGGCCACCGGAGTGGAGGCAGCCTCC
GCCCCAGAGCGCTCCGAATCCAGCCGATGCATGCCGTTCGAGGACTGCGTCGCCGGCATC
AAGTCGTCTCTCAAAAATCCGACGGTGCGGTTCCTGATGGAGCGGATGGATAAGGCCGGC
TGCCCGATGCCGCCGGGGATGATCACGGCGAGGAACTGCGGGACTGCCGATAAGAATGGT
TCCTACGGTTCCCGGATAGGGATAACGGTTTGCTGTGAAGAAATACGATATAAAGATGAG
ATAACTCAGCTATTAATTCACGAATTAATACATGCCTATGATGATTGTGTTGTCAAGGAC
ATGGATTGGAAGAACTGTGCTCACCATGCTTGCTCCGAGATTCGAGCTAACCACCTTAGT
GGTGACTGCCATTATAAACGTGAATTGTTGCGTGGCTTCATGAAGATGAGGGGGCATGAG
CAAGAATGTGTTAAACGGCGGGCTCTGATGTCTCTCAGGAACAACCCACACTGTTCAGGG
ACAGCTGCAAAAGATGCAGTTGAGGCTGTATGGAGTATATGCTACAATGATACACGCCCA
TTTGATAGGGCTCCATGA

Peptide Sequence

PEP ID

Os04t0482700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24129561:24133261:-1 gene:Os04g0482700 transcript:Os04t0482700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525D09.10 protein. (Os04t0482700-01)
Sequence

MAGTGGRTGEPEATGVEAASAPERSESSRCMPFEDCVAGIKSSLKNPTVRFLMERMDKAG
CPMPPGMITARNCGTADKNGSYGSRIGITVCCEEIRYKDEITQLLIHELIHAYDDCVVKD
MDWKNCAHHACSEIRANHLSGDCHYKRELLRGFMKMRGHEQECVKRRALMSLRNNPHCSG
TAAKDAVEAVWSICYNDTRPFDRAP

Transcript Sequence

Transcript ID

Os04t0482700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24129561:24133261:-1 gene:Os04g0482700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525D09.10 protein. (Os04t0482700-01)
Sequence

AAACCAAACCCCCACCTCCCACCTCCCCGGAGCCGCCGCGCCGCCGCCGGAGCGAGCCAG
TGAGCGATGGCCGGGACGGGCGGAAGAACCGGCGAGCCGGAGGCCACCGGAGTGGAGGCA
GCCTCCGCCCCAGAGCGCTCCGAATCCAGCCGATGCATGCCGTTCGAGGACTGCGTCGCC
GGCATCAAGTCGTCTCTCAAAAATCCGACGGTGCGGTTCCTGATGGAGCGGATGGATAAG
GCCGGCTGCCCGATGCCGCCGGGGATGATCACGGCGAGGAACTGCGGGACTGCCGATAAG
AATGGTTCCTACGGTTCCCGGATAGGGATAACGGTTTGCTGTGAAGAAATACGATATAAA
GATGAGATAACTCAGCTATTAATTCACGAATTAATACATGCCTATGATGATTGTGTTGTC
AAGGACATGGATTGGAAGAACTGTGCTCACCATGCTTGCTCCGAGATTCGAGCTAACCAC
CTTAGTGGTGACTGCCATTATAAACGTGAATTGTTGCGTGGCTTCATGAAGATGAGGGGG
CATGAGCAAGAATGTGTTAAACGGCGGGCTCTGATGTCTCTCAGGAACAACCCACACTGT
TCAGGGACAGCTGCAAAAGATGCAGTTGAGGCTGTATGGAGTATATGCTACAATGATACA
CGCCCATTTGATAGGGCTCCATGATATTATTGGCAACATTACAAGAAGCCATGAATTAAG
ATTGTGCACCCCTGCTGGGGATAATTTTGTTCCCCTTCAGTCAATTGTAGTTAAGCAAAG
AACTTATTTTTTTGCTGGAGCAAAGCTGTATTAGGCTATAAGTCATGACTCGAGTTCATG
AACATTGTAGTGAATTAGCTCATATGATGATTCTATTATCTTTTGCATTACATAGTTGGA
CAAAGTATAATAAGCTCCTAGAAAAGACTTGTGCCATGGGTTACTTCTTCATGAGGT