Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0482300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:24115971:24118142:1 gene:Os04g0482300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os04t0482300-01)
Sequence

ATGACGCAGTGGGCGGATCTGGACGCGCTCCGGCCGGCGGTGGCCGCCGACGTGCAGGTC
GTCACGTCGGACGGGAAGAGCATCGCCGCCCATTCGTTCGTTCTTGGCACGGCGTCGCCG
GTGCTGGAGCGGATGATCGAGCGGGCACGGCGGGGGTGGAACGCCGAGTGCACCATCCGC
GTCCTCGGCGTCTCCTCCGACGCCGTCTTCGCCTTCCTCCAGTTGCTCTACGCTTCCAGG
GTGACGCCGGAGGACGAGGAGGTGGTGACCGCGCACGGGCCGCAGCTGCTGGCGCTGTCG
CACGCGTACAGGATCGGGTGGCTGAAGCGCGCGGCGGAGGCGTCCGTGACGGCGCGGCTC
ACGCCGGAGCACGCGGTGGACATGCTGAAGCTCGCCAGGCTCTGCGACGCGCCGCGGCTG
TACCTGCGGTGCGCGCGCCTCGCGGCCAAGGACTTCGCCGCCGTCGAGCGGTCCGAGGGC
TGGCGCTTCGCGCGCCGCCACGACGCCGCGCTGGAGCTCGAGATCCTCCAGCTCCTCGAG
GACGCCGACCAGCGGAGGGAGCGGTGGGCGCGGGAGAGGGCGTCCCGGGAGGCGTACCGC
CAGCTCGGCGAGGCCATGGACTCCCTCGAGCACATCTTCTCCGACGACGGCTGCTCCTGC
GCCGACGCCGACGCCGACGCCGACACCGACGCGCCGCCGTGCCGCGGCCTGCGCCTGCTG
ATGCGGCACTACGCGACGTGCGGCGCCCGCAAGGCCGCGCCGGGCGGCGGGTGCACGCGC
TGCAAGCGCATGGTGCAGCTGTTCCGCCTCCACGCCTCCGTCTGCGACCGGGCGGCGCCG
CACGACGACGGCGACCGCCCATGCCGCGTGCCGCTGTGCAGTCATTTCAAGGGCAAGATG
CGGGCGGAGAAGGCGGACAAGACGTGGCGGCTGCTGGTGAAGAAGGTGACGAGGGCGAGG
GCGATGTCGCGGCTGGCGGCGGGGCGCGAGCGCGAGGTGGTGCCGGAGGTGGTGGCCGCG
TCGTGGGCGAGGTACAGCAGCAGCGGAGGGGCCGCCAGGTTGAGATGA

Peptide Sequence

PEP ID

Os04t0482300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:24115971:24118142:1 gene:Os04g0482300 transcript:Os04t0482300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os04t0482300-01)
Sequence

MTQWADLDALRPAVAADVQVVTSDGKSIAAHSFVLGTASPVLERMIERARRGWNAECTIR
VLGVSSDAVFAFLQLLYASRVTPEDEEVVTAHGPQLLALSHAYRIGWLKRAAEASVTARL
TPEHAVDMLKLARLCDAPRLYLRCARLAAKDFAAVERSEGWRFARRHDAALELEILQLLE
DADQRRERWARERASREAYRQLGEAMDSLEHIFSDDGCSCADADADADTDAPPCRGLRLL
MRHYATCGARKAAPGGGCTRCKRMVQLFRLHASVCDRAAPHDDGDRPCRVPLCSHFKGKM
RAEKADKTWRLLVKKVTRARAMSRLAAGREREVVPEVVAASWARYSSSGGAARLR

Transcript Sequence

Transcript ID

Os04t0482300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24115971:24118142:1 gene:Os04g0482300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os04t0482300-01)
Sequence

ATCATTATTCCCAGCTCAGATCATCGTTGCGAGACCGATCGATCGATCCATCTTGTTGTT
GCGTTGCTCTGTTTGGTTTCCGTAGTAGATCGTTTCTTGGTTAGCCGGCCTGTTGAATTG
TTAATCACGAGAATTTGGGTATTTTCTGATCGATGACGCAGTGGGCGGATCTGGACGCGC
TCCGGCCGGCGGTGGCCGCCGACGTGCAGGTCGTCACGTCGGACGGGAAGAGCATCGCCG
CCCATTCGTTCGTTCTTGGCACGGCGTCGCCGGTGCTGGAGCGGATGATCGAGCGGGCAC
GGCGGGGGTGGAACGCCGAGTGCACCATCCGCGTCCTCGGCGTCTCCTCCGACGCCGTCT
TCGCCTTCCTCCAGTTGCTCTACGCTTCCAGGGTGACGCCGGAGGACGAGGAGGTGGTGA
CCGCGCACGGGCCGCAGCTGCTGGCGCTGTCGCACGCGTACAGGATCGGGTGGCTGAAGC
GCGCGGCGGAGGCGTCCGTGACGGCGCGGCTCACGCCGGAGCACGCGGTGGACATGCTGA
AGCTCGCCAGGCTCTGCGACGCGCCGCGGCTGTACCTGCGGTGCGCGCGCCTCGCGGCCA
AGGACTTCGCCGCCGTCGAGCGGTCCGAGGGCTGGCGCTTCGCGCGCCGCCACGACGCCG
CGCTGGAGCTCGAGATCCTCCAGCTCCTCGAGGACGCCGACCAGCGGAGGGAGCGGTGGG
CGCGGGAGAGGGCGTCCCGGGAGGCGTACCGCCAGCTCGGCGAGGCCATGGACTCCCTCG
AGCACATCTTCTCCGACGACGGCTGCTCCTGCGCCGACGCCGACGCCGACGCCGACACCG
ACGCGCCGCCGTGCCGCGGCCTGCGCCTGCTGATGCGGCACTACGCGACGTGCGGCGCCC
GCAAGGCCGCGCCGGGCGGCGGGTGCACGCGCTGCAAGCGCATGGTGCAGCTGTTCCGCC
TCCACGCCTCCGTCTGCGACCGGGCGGCGCCGCACGACGACGGCGACCGCCCATGCCGCG
TGCCGCTGTGCAGTCATTTCAAGGGCAAGATGCGGGCGGAGAAGGCGGACAAGACGTGGC
GGCTGCTGGTGAAGAAGGTGACGAGGGCGAGGGCGATGTCGCGGCTGGCGGCGGGGCGCG
AGCGCGAGGTGGTGCCGGAGGTGGTGGCCGCGTCGTGGGCGAGGTACAGCAGCAGCGGAG
GGGCCGCCAGGTTGAGATGACCGTGAGAACTGTGTTACGTACACAGGGCCATGTGGATGG
CGTGCGGGACCTTTTCGTGCGTGTTCCTCGCGTGCAATTTTTCGTCGTGGGAGGGAACAC
CGCGGAAAATGGCGTGCCATATGCCCCTGCTGCTGCCATGGGTGGGGTTGGTGGGCTCTC
GTAGGAGTGTGACATAAGCCTGTGATGTCAGGAGGGGAATTGAAGGTGGTGCACGATTCG
ATTAGACAGTGTAGTGTCGGTGTTTCAAGCTTGTTGTAGCTGGAATGAACTCAAGCGGAA
CTCGTGTATTAAGTACTGTATTTGTGTTCCATCAAAGAAAATACTTTTTTTTGTC