Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0482100-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:24109091:24111210:-1 gene:Os04g0482100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A2.2 description:Similar to H0510A06.16 protein. (Os04t0482100-00)
Sequence

ATGTCGAACGATACCGGCGCCGACGGCGGCGCGGCGAACCCCGACCTGGGGCCGGACGCC
GACGCGGCGGCCGGCGAGGGCCTTGAGCTGGCGCAGTTCGCGGCGGGGTGCTTCTGGAGC
GTGGAGCTGACGTACCAGCGGCTCCCGGGCGTGGCGCGAACGGAGGTGGGCTTCTCGCAG
GGGCACCACCACGAGCCGACCTACGACGACGTCTGCGGCCAAGGCACGGGACACGCCGAG
GTGGTGCGCGTGCACTACGACCCCAAGGCCTGCCCCTACGGCGTCCTCCTCGACGTCTTC
TGGGCGAAGCACAGGCCCACCACGCTCATCAGACAGGGAGACGAAGCCGGGACGCAGTAT
CGGTCGGGCATATACTACTACACGGCGGAGCAGGAGAGGGTGGCGCGGGAGTCGCTGGAG
GCGAAGCAGGAGGAGTGGAAGGAGAAGATCGTGACGGAGATCCTCCCGGCGAGGAGGTTC
TACCCCGCCGAGGAGTACCACCAGCGCTACCTCGAGAAGGGCGGCCAGTCCGCCCAGAAG
GGCTGCACCGACCCCATCCGCCGCTACGGCTAA

Peptide Sequence

PEP ID

Os04t0482100-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:24109091:24111210:-1 gene:Os04g0482100 transcript:Os04t0482100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A2.2 description:Similar to H0510A06.16 protein. (Os04t0482100-00)
Sequence

MSNDTGADGGAANPDLGPDADAAAGEGLELAQFAAGCFWSVELTYQRLPGVARTEVGFSQ
GHHHEPTYDDVCGQGTGHAEVVRVHYDPKACPYGVLLDVFWAKHRPTTLIRQGDEAGTQY
RSGIYYYTAEQERVARESLEAKQEEWKEKIVTEILPARRFYPAEEYHQRYLEKGGQSAQK
GCTDPIRRYG

Transcript Sequence

Transcript ID

Os04t0482100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:24109091:24111210:-1 gene:Os04g0482100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Methionine sulfoxide reductase A2.2 description:Similar to H0510A06.16 protein. (Os04t0482100-00)
Sequence

CCACCGCCGCTCCGCTCCCACGCTTGCCCACCGTCGCTCCACGCGCTGCCCGCCGCTCCG
CTCCCGTGTTCCCCGCGCCCGTCGTCGCGCTCAACCGCCGCTGCTCTGCTCCCACGCTCG
CTCGCCGTCGCTCCCTCCAACCCCAATCCCGAACCACTCAACCACTAACGCCAGATCGGT
CGCGACACCCACCGCCCATCGCCCATGTCGAACGATACCGGCGCCGACGGCGGCGCGGCG
AACCCCGACCTGGGGCCGGACGCCGACGCGGCGGCCGGCGAGGGCCTTGAGCTGGCGCAG
TTCGCGGCGGGGTGCTTCTGGAGCGTGGAGCTGACGTACCAGCGGCTCCCGGGCGTGGCG
CGAACGGAGGTGGGCTTCTCGCAGGGGCACCACCACGAGCCGACCTACGACGACGTCTGC
GGCCAAGGCACGGGACACGCCGAGGTGGTGCGCGTGCACTACGACCCCAAGGCCTGCCCC
TACGGCGTCCTCCTCGACGTCTTCTGGGCGAAGCACAGGCCCACCACGCTCATCAGACAG
GGAGACGAAGCCGGGACGCAGTATCGGTCGGGCATATACTACTACACGGCGGAGCAGGAG
AGGGTGGCGCGGGAGTCGCTGGAGGCGAAGCAGGAGGAGTGGAAGGAGAAGATCGTGACG
GAGATCCTCCCGGCGAGGAGGTTCTACCCCGCCGAGGAGTACCACCAGCGCTACCTCGAG
AAGGGCGGCCAGTCCGCCCAGAAGGGCTGCACCGACCCCATCCGCCGCTACGGCTAA