Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0480900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24054885:24058958:1 gene:Os04g0480900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 5 protein. (Os04t0480900-01)
Sequence	ATGGCTTCTTCCTCTCCACTTCTCCTGCTGCTACTGCTGCTCCCGCTCGCCGCCGCCACC GCCACCGCGTCGCTCCCGCCGCTGCCGCTCTCGACGGCGTCGCGGTGGGTGGTGGGCGCG GACGGGCGGCGCGTGAAGCTGGCGTGCGCGAACTGGGCGTCGCACCTGGAGCCCGTGGCG GCGGAGGGCCTGTCGCGCCGCGGCCTTGGGGACATCGCGGCGCGCGTGGCGGCGATGGGG TTAAACTGCGTCAGGCTCACCTGGCCGACCTACCTCGCCACCAACGCCACGCTGGCGAAC CTGCCGCTGAGAGCGTCGCTGGAACGCCTTGGTATGCCGGAGTCCGTGGCCGGCGTCCGG GTCAACAACCCCGGACTCCTCGACCTGCCCCTCATCGATGTGTTCCAGGAAGTGGTGTCA GCTTTGGCCAAGAACAATATAATGGTTATACTTGATAACCAAATGACAACTCCAGGATGG TGCTGCAGCGAAAACGACGGTAATGGCTTTTTTGGTGACAAGTACTTTGGCCCAGAAGAA TGGTTGAAAGGCCTTAGTGCAATGGCAACAATGTTTAGGAACACAAAAAATGTTGTGGGC ATGAGTTTAAGAAACGAGCTCCGAGGCTCCAAAAATGTTAGTTTGTGGTTCAGGTACATG CAACTGGGTGCTGAAGTTGTGCATGCGGCAAACCCTGGCGTTCTTGTTATTTTGTCAGGC CTGAACTTCGACAATACTCTGGATTTCTTGGTCCCAAATCAAATTCAGCTAACATTTACT GGAAAGTTAGTCTTTGAGCAGCACTGGTATGGTTTCTCAGATGATGGAAACTGGGGATCT CAGAACCAAAACGATGCTTGTGGGATGGTTGTTGATTCCATAAAGAAAAAAGGACTGTTC CTACTTCAGCAAGGCTGGCCACTGTTTTTCTCCGAGTTTGGGTTTGACATGTCTGGGACA CATGTCGCTGACAATCGCTATCTTACCTGCTTCTTAACCGTGGCAGCTGAAATGGATCTG GACTGGGCTATTTGGGCTCTGCAAGGGAGTTATTATATCAGGGAGGGTACTCTAGCTTAT GATGAATCTTATGGATTGCTATCCTGGGATTGGTGTACAGCTAGAAACCCCAGCTTTATT AAAAGGATTAATGCTCTGCAATCACCATTCCAAGGTCCCGGGCTTCCAAACAGTCAACAG CCTTACAATGTTATATTCCATCCTCTATCTGGGCTTTGTGTCTTGGTGAAATCTTCAGAG GCACTTGAGTTGGGTCCATGTGATAAATCAAATGCTTGGAATTATACCAAAGGATACGAG TTAATACTCAAACAAACTGGACAATGCCTCCAGGCGAAGTCTGTTGGTGAGAATGCAAAG CTTGGCACCAGTTGCAGCAAATCCAGTTCAAAGTGGAAGCTACTATCAAATTCAGGAATG CATGTTTCAACTGAACTCACCAATAACGGAACCAGAGTATGCTTGGAGGCCAGTCCTGAT GGAAATATCACGACAAATCAGTGCAAGTGCCTAACCGTAGATCCGAATTGCAATCCTGAG AGTCAGTGGTTCAAAATTATATTAAGCAGTAAACACATACCAGGCGGCACCTCCATTTTG CAGTTGCCATCTCATGGTCCCTGGTCTCCAACATCATCTAGTTAA

Peptide Sequence

PEP ID	Os04t0480900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24054885:24058958:1 gene:Os04g0480900 transcript:Os04t0480900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 5 protein. (Os04t0480900-01)
Sequence	MASSSPLLLLLLLLPLAAATATASLPPLPLSTASRWVVGADGRRVKLACANWASHLEPVA AEGLSRRGLGDIAARVAAMGLNCVRLTWPTYLATNATLANLPLRASLERLGMPESVAGVR VNNPGLLDLPLIDVFQEVVSALAKNNIMVILDNQMTTPGWCCSENDGNGFFGDKYFGPEE WLKGLSAMATMFRNTKNVVGMSLRNELRGSKNVSLWFRYMQLGAEVVHAANPGVLVILSG LNFDNTLDFLVPNQIQLTFTGKLVFEQHWYGFSDDGNWGSQNQNDACGMVVDSIKKKGLF LLQQGWPLFFSEFGFDMSGTHVADNRYLTCFLTVAAEMDLDWAIWALQGSYYIREGTLAY DESYGLLSWDWCTARNPSFIKRINALQSPFQGPGLPNSQQPYNVIFHPLSGLCVLVKSSE ALELGPCDKSNAWNYTKGYELILKQTGQCLQAKSVGENAKLGTSCSKSSSKWKLLSNSGM HVSTELTNNGTRVCLEASPDGNITTNQCKCLTVDPNCNPESQWFKIILSSKHIPGGTSIL QLPSHGPWSPTSSS

Transcript Sequence

Transcript ID	Os04t0480900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24054885:24058958:1 gene:Os04g0480900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 5 protein. (Os04t0480900-01)
Sequence	ACTTGTTACCATGGCTTCTTCCTCTCCACTTCTCCTGCTGCTACTGCTGCTCCCGCTCGC CGCCGCCACCGCCACCGCGTCGCTCCCGCCGCTGCCGCTCTCGACGGCGTCGCGGTGGGT GGTGGGCGCGGACGGGCGGCGCGTGAAGCTGGCGTGCGCGAACTGGGCGTCGCACCTGGA GCCCGTGGCGGCGGAGGGCCTGTCGCGCCGCGGCCTTGGGGACATCGCGGCGCGCGTGGC GGCGATGGGGTTAAACTGCGTCAGGCTCACCTGGCCGACCTACCTCGCCACCAACGCCAC GCTGGCGAACCTGCCGCTGAGAGCGTCGCTGGAACGCCTTGGTATGCCGGAGTCCGTGGC CGGCGTCCGGGTCAACAACCCCGGACTCCTCGACCTGCCCCTCATCGATGTGTTCCAGGA AGTGGTGTCAGCTTTGGCCAAGAACAATATAATGGTTATACTTGATAACCAAATGACAAC TCCAGGATGGTGCTGCAGCGAAAACGACGGTAATGGCTTTTTTGGTGACAAGTACTTTGG CCCAGAAGAATGGTTGAAAGGCCTTAGTGCAATGGCAACAATGTTTAGGAACACAAAAAA TGTTGTGGGCATGAGTTTAAGAAACGAGCTCCGAGGCTCCAAAAATGTTAGTTTGTGGTT CAGGTACATGCAACTGGGTGCTGAAGTTGTGCATGCGGCAAACCCTGGCGTTCTTGTTAT TTTGTCAGGCCTGAACTTCGACAATACTCTGGATTTCTTGGTCCCAAATCAAATTCAGCT AACATTTACTGGAAAGTTAGTCTTTGAGCAGCACTGGTATGGTTTCTCAGATGATGGAAA CTGGGGATCTCAGAACCAAAACGATGCTTGTGGGATGGTTGTTGATTCCATAAAGAAAAA AGGACTGTTCCTACTTCAGCAAGGCTGGCCACTGTTTTTCTCCGAGTTTGGGTTTGACAT GTCTGGGACACATGTCGCTGACAATCGCTATCTTACCTGCTTCTTAACCGTGGCAGCTGA AATGGATCTGGACTGGGCTATTTGGGCTCTGCAAGGGAGTTATTATATCAGGGAGGGTAC TCTAGCTTATGATGAATCTTATGGATTGCTATCCTGGGATTGGTGTACAGCTAGAAACCC CAGCTTTATTAAAAGGATTAATGCTCTGCAATCACCATTCCAAGGTCCCGGGCTTCCAAA CAGTCAACAGCCTTACAATGTTATATTCCATCCTCTATCTGGGCTTTGTGTCTTGGTGAA ATCTTCAGAGGCACTTGAGTTGGGTCCATGTGATAAATCAAATGCTTGGAATTATACCAA AGGATACGAGTTAATACTCAAACAAACTGGACAATGCCTCCAGGCGAAGTCTGTTGGTGA GAATGCAAAGCTTGGCACCAGTTGCAGCAAATCCAGTTCAAAGTGGAAGCTACTATCAAA TTCAGGAATGCATGTTTCAACTGAACTCACCAATAACGGAACCAGAGTATGCTTGGAGGC CAGTCCTGATGGAAATATCACGACAAATCAGTGCAAGTGCCTAACCGTAGATCCGAATTG CAATCCTGAGAGTCAGTGGTTCAAAATTATATTAAGCAGTAAACACATACCAGGCGGCAC CTCCATTTTGCAGTTGCCATCTCATGGTCCCTGGTCTCCAACATCATCTAGTTAATCTTG GACTATTTCGAAAATATCCTGTTTGAATTTGATCAAGGACGAATATGACAGAGCAAGTGT CAAGTTCCAGATGGTTATTCAAGGCAATTGGATGACTATAGTATTGCAGCTTGTAAAATA ATACACAGAACACCGTATGTGTACAGTAGTAGTACCATTGATTTCTTGTTTTCTAGAGTC CTGTTGAAATATGTCCTATCATATGTGTACAAAAATTAAGAATAAAAGAATGTACAGATA AATACCCTGCTTTTTCTTTGATACTACAGAGAATAAAAGGGATATCTTTTTATAGTTGGT GTCATATGTTGAC