Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0480500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24032526:24035930:1 gene:Os04g0480500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0480500-01)
Sequence	ATGGAGAGATTACATACGAGCCGTAACCACGTCTATGGCTTCATCATCATCCTCCTCCTC CTCGTACAAGCTACGGCCGCGGCCACCTCGCGGTGCCCGGCGCAACAGGCCGCCGCGCTG CTCCGGCTCAAACGATCCTTCCACCACCACCACCAGCCGCTCCTCCTGCCGTCGTGGCGC GCCGCCACGGACTGCTGCCTCTGGGAGGGCGTGTCGTGCGACGCGGCCTCCGGCGTCGTC GTCACCGCGCTCGACCTCGGTGGCCACGGGGTACATAGCCCCGGCGGCCTGGACGGCGCC GCCCTCTTCCAGCTCACGTCGCTCCGGCGGCTCAGCCTCGCGGGGAACGACTTCGGCGGC GCGGGGCTCCCGGCGTCCGGGCTCGAGGGGCTCGCCGAGCTCACCCACCTCAACCTCTCC AACGCCGGCTTCGCCGGCCAGATACCCATCGGCGTCGGCAGCCTGAGGGAGCTCGTGTCC CTCGACCTCTCCTCCATGCCACTCTCCTTCAAGCAACCGAGCTTCAGAGCTGTAATGGCC AACCTGACGAAGCTGAGGGAGCTCCGGCTGGACGGGGTGGACATGTCGGCGGCGGCGGCG GCGGCGGCCGGAGACTGGTGCGACGTGCTCGCGGAATCCGCCCCCAAGCTCCAGCTCCTC ACCTTGCAGTCCTGCAAGCTCTCCGGCGCCATACGCTCCTCCTTCTCGCGCCTCGGGTCC CTCGCCGTCATCGACCTGTCATACAACCAGGGCTTCTCCGACGCGTCCGGCGAGCCCTTC GCCTTGTCGGGTGAGATCCCCGGCTTCTTCGCCGAGCTCAGCTCACTGGCGATTCTCAAC CTCTCCAACAATGGCTTCAACGGCTCGTTTCCTCAAGGAGTGTTCCACCTGGAGAGGCTC AGGGTGCTAGACGTGTCGTCGAACACCAACCTCTCCGGCAGCTTGCCGGAGTTCCCGGCC GCCGGGGAAGCCTCCCTGGAGGTGCTGGACCTGAGCGAGACCAATTTTTCCGGCCAAATT CCGGGCTCCATCGGAAACCTGAAGCGTCTGAAGATGCTGGACATCAGTGGCAGCAACGGC CGCTTCTCTGGTGCTCTTCCTGATTCGATCAGTGAGCTTACATCCTTGAGCTTCTTGGAC CTGAGCAGCAGCGGGTTCCAACTCGGGGAATTGCCTGCTTCCATCGGCAGGATGCGGTCA CTGTCCACGCTTCGGCTGAGTGAGTGTGCCATCTCCGGCGAGATACCGTCGTCCGTTGGG AATCTCACACGCTTGAGAGAGTTGGATCTCTCACAGAACAATCTCACAGGGCCAATAACC TCCATCAACAGGAAAGGGGCATTCCTGAACCTAGAGATATTGCAGCTATGTTGTAACTCC CTGTCAGGGCCAGTTCCAGCCTTCTTATTCTCACTTCCACGATTGGAGTTCATATCGCTC ATGTCAAACAATCTAGCAGGTCCCCTCCAAGAATTCGACAATCCTTCTCCGTCCCTAACA TCTGTTTACCTGAATTACAACCAGTTGAATGGATCAATACCCAGGTCTTTCTTTCAGCTC ATGGGCTTACAGACACTAGATCTCTCTAGGAACGGCTTGAGTGGGGAAGTACAACTTAGT TACATTTGGAGACTCACAAATCTAAGTAACCTATGCCTGTCAGCAAACAGACTGACAGTG ATAGCTGATGATGAACACATCTACAACAGCTCTTCCTCTGCATCACTCCTTCAACTTAAC TCCCTGGGGTTAGCATGCTGCAACATGACCAAGATCCCTGCCATACTAAGGTCAGTTGTG GTGAATGACCTTGATCTCTCGTGCAACCAACTTGATGGGCCTATACCCGATTGGATATGG GCAAATCAGAACGAGAACATAGATGTCTTCAAGTTCAATCTTTCGCGCAATAGATTTACT AACATGGAGCTCCCTCTGGCTAATGCCAGCGTATACTATCTTGATCTTAGTTTCAACTAT CTTCAAGGGCCTCTACCTGTCCCCTCATCTCCACAGTTCTTGGATTACTCCAACAACCTA TTCTCATCAATCCCGGAGAACTTGATGTCAAGGTTGAGCAGTTCTTTCTTTCTGAACTTG GCCAACAATTCACTGCAGGGGGGCATCCCACCTATCATTTGCAATGCAAGTGACCTCAAA TTCCTTGACCTGTCTTACAACCATTTCAGTGGTCGTGTTCCACCTTGTCTACTAGATGGA CATCTGACCATATTGAAGCTGAGACAAAACAAATTTGAGGGGACCTTGCCTGATGACACC AAAGGAGGATGTGTTTCTCAGACAATAGACCTGAATGGAAATCAATTGGGGGGGAAGCTA CCTAGATCACTCACTAACTGCAATGACCTAGAAATCCTTGATGTGGGCAACAACAATTTC GTGGACTCCTTCCCAAGCTGGACAGGGGAGCTACCAAAGCTTAGGGTTCTTGTTCTACGA TCCAACAAATTCTTCGGCGCAGTGGGGGGAATTCCTGTCGACAACGGTGATCGAAACAGA ACACAATTCTCTAGTTTGCAGATCATCGATCTTGCCTCAAACAACTTCTCTGGCAGTTTG CAGCCGCAATGGTTCGATAGCCTCAAAGCAATGATGGTTACAAGAGAGGGTGACGTGCGA AAGGCCCTGGAGAACAACCTCTCGGGGAAATTCTACCGTGACACAGTCGTGGTCACGTAC AAGGGCGCGGCCACGACATTCATCAGGGTCCTGATCGCCTTCACGATGATCGACTTCTCC GACAACGCGTTCACCGGCAACATTCCTGAATCCATTGGAAGGCTCACCTCGCTAAGAGGT CTCAACCTGTCGCATAATGCCTTCACCGGAACAATCCCTTCTCAGCTCAGTGGATTGGCG CAGCTTGAATCGCTCGATCTCTCTTTGAACCAGCTTAGTGGGGAGATCCCAGAGGTGTTG GTGTCTTTAACTTCTGTCGGCTGGTTGAACTTGTCCTACAATCGTTTGGAGGGTGCTATT CCGCAGGGAGGTCAATTTCAGACGTTTGGAAGTAGCTCATTTGAAGGGAATGCCGCCCTA TGCGGCAAACCGCTGTCTATTCGGTGCAATGGTTCGAATGCAGGGCCCCCTTCGTTGGAG CACAGTGAGAGCTGGGAGGCCCGGACAGAGACCATTGTACTGTATATTTCCGTTGGATCA GGGTTCGGTTTGGGATTTGCAATGGCCTTCTTGTTCCAAGTGTTCCGCGGAAAGTGA

Peptide Sequence

PEP ID	Os04t0480500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24032526:24035930:1 gene:Os04g0480500 transcript:Os04t0480500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0480500-01)
Sequence	MERLHTSRNHVYGFIIILLLLVQATAAATSRCPAQQAAALLRLKRSFHHHHQPLLLPSWR AATDCCLWEGVSCDAASGVVVTALDLGGHGVHSPGGLDGAALFQLTSLRRLSLAGNDFGG AGLPASGLEGLAELTHLNLSNAGFAGQIPIGVGSLRELVSLDLSSMPLSFKQPSFRAVMA NLTKLRELRLDGVDMSAAAAAAAGDWCDVLAESAPKLQLLTLQSCKLSGAIRSSFSRLGS LAVIDLSYNQGFSDASGEPFALSGEIPGFFAELSSLAILNLSNNGFNGSFPQGVFHLERL RVLDVSSNTNLSGSLPEFPAAGEASLEVLDLSETNFSGQIPGSIGNLKRLKMLDISGSNG RFSGALPDSISELTSLSFLDLSSSGFQLGELPASIGRMRSLSTLRLSECAISGEIPSSVG NLTRLRELDLSQNNLTGPITSINRKGAFLNLEILQLCCNSLSGPVPAFLFSLPRLEFISL MSNNLAGPLQEFDNPSPSLTSVYLNYNQLNGSIPRSFFQLMGLQTLDLSRNGLSGEVQLS YIWRLTNLSNLCLSANRLTVIADDEHIYNSSSSASLLQLNSLGLACCNMTKIPAILRSVV VNDLDLSCNQLDGPIPDWIWANQNENIDVFKFNLSRNRFTNMELPLANASVYYLDLSFNY LQGPLPVPSSPQFLDYSNNLFSSIPENLMSRLSSSFFLNLANNSLQGGIPPIICNASDLK FLDLSYNHFSGRVPPCLLDGHLTILKLRQNKFEGTLPDDTKGGCVSQTIDLNGNQLGGKL PRSLTNCNDLEILDVGNNNFVDSFPSWTGELPKLRVLVLRSNKFFGAVGGIPVDNGDRNR TQFSSLQIIDLASNNFSGSLQPQWFDSLKAMMVTREGDVRKALENNLSGKFYRDTVVVTY KGAATTFIRVLIAFTMIDFSDNAFTGNIPESIGRLTSLRGLNLSHNAFTGTIPSQLSGLA QLESLDLSLNQLSGEIPEVLVSLTSVGWLNLSYNRLEGAIPQGGQFQTFGSSSFEGNAAL CGKPLSIRCNGSNAGPPSLEHSESWEARTETIVLYISVGSGFGLGFAMAFLFQVFRGK

Transcript Sequence

Transcript ID	Os04t0480500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24032526:24035930:1 gene:Os04g0480500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0480500-01)
Sequence	ACTCGCACGCACACCTTTCTTCTTCTACATGGAGAGATTACATACGAGCCGTAACCACGT CTATGGCTTCATCATCATCCTCCTCCTCCTCGTACAAGCTACGGCCGCGGCCACCTCGCG GTGCCCGGCGCAACAGGCCGCCGCGCTGCTCCGGCTCAAACGATCCTTCCACCACCACCA CCAGCCGCTCCTCCTGCCGTCGTGGCGCGCCGCCACGGACTGCTGCCTCTGGGAGGGCGT GTCGTGCGACGCGGCCTCCGGCGTCGTCGTCACCGCGCTCGACCTCGGTGGCCACGGGGT ACATAGCCCCGGCGGCCTGGACGGCGCCGCCCTCTTCCAGCTCACGTCGCTCCGGCGGCT CAGCCTCGCGGGGAACGACTTCGGCGGCGCGGGGCTCCCGGCGTCCGGGCTCGAGGGGCT CGCCGAGCTCACCCACCTCAACCTCTCCAACGCCGGCTTCGCCGGCCAGATACCCATCGG CGTCGGCAGCCTGAGGGAGCTCGTGTCCCTCGACCTCTCCTCCATGCCACTCTCCTTCAA GCAACCGAGCTTCAGAGCTGTAATGGCCAACCTGACGAAGCTGAGGGAGCTCCGGCTGGA CGGGGTGGACATGTCGGCGGCGGCGGCGGCGGCGGCCGGAGACTGGTGCGACGTGCTCGC GGAATCCGCCCCCAAGCTCCAGCTCCTCACCTTGCAGTCCTGCAAGCTCTCCGGCGCCAT ACGCTCCTCCTTCTCGCGCCTCGGGTCCCTCGCCGTCATCGACCTGTCATACAACCAGGG CTTCTCCGACGCGTCCGGCGAGCCCTTCGCCTTGTCGGGTGAGATCCCCGGCTTCTTCGC CGAGCTCAGCTCACTGGCGATTCTCAACCTCTCCAACAATGGCTTCAACGGCTCGTTTCC TCAAGGAGTGTTCCACCTGGAGAGGCTCAGGGTGCTAGACGTGTCGTCGAACACCAACCT CTCCGGCAGCTTGCCGGAGTTCCCGGCCGCCGGGGAAGCCTCCCTGGAGGTGCTGGACCT GAGCGAGACCAATTTTTCCGGCCAAATTCCGGGCTCCATCGGAAACCTGAAGCGTCTGAA GATGCTGGACATCAGTGGCAGCAACGGCCGCTTCTCTGGTGCTCTTCCTGATTCGATCAG TGAGCTTACATCCTTGAGCTTCTTGGACCTGAGCAGCAGCGGGTTCCAACTCGGGGAATT GCCTGCTTCCATCGGCAGGATGCGGTCACTGTCCACGCTTCGGCTGAGTGAGTGTGCCAT CTCCGGCGAGATACCGTCGTCCGTTGGGAATCTCACACGCTTGAGAGAGTTGGATCTCTC ACAGAACAATCTCACAGGGCCAATAACCTCCATCAACAGGAAAGGGGCATTCCTGAACCT AGAGATATTGCAGCTATGTTGTAACTCCCTGTCAGGGCCAGTTCCAGCCTTCTTATTCTC ACTTCCACGATTGGAGTTCATATCGCTCATGTCAAACAATCTAGCAGGTCCCCTCCAAGA ATTCGACAATCCTTCTCCGTCCCTAACATCTGTTTACCTGAATTACAACCAGTTGAATGG ATCAATACCCAGGTCTTTCTTTCAGCTCATGGGCTTACAGACACTAGATCTCTCTAGGAA CGGCTTGAGTGGGGAAGTACAACTTAGTTACATTTGGAGACTCACAAATCTAAGTAACCT ATGCCTGTCAGCAAACAGACTGACAGTGATAGCTGATGATGAACACATCTACAACAGCTC TTCCTCTGCATCACTCCTTCAACTTAACTCCCTGGGGTTAGCATGCTGCAACATGACCAA GATCCCTGCCATACTAAGGTCAGTTGTGGTGAATGACCTTGATCTCTCGTGCAACCAACT TGATGGGCCTATACCCGATTGGATATGGGCAAATCAGAACGAGAACATAGATGTCTTCAA GTTCAATCTTTCGCGCAATAGATTTACTAACATGGAGCTCCCTCTGGCTAATGCCAGCGT ATACTATCTTGATCTTAGTTTCAACTATCTTCAAGGGCCTCTACCTGTCCCCTCATCTCC ACAGTTCTTGGATTACTCCAACAACCTATTCTCATCAATCCCGGAGAACTTGATGTCAAG GTTGAGCAGTTCTTTCTTTCTGAACTTGGCCAACAATTCACTGCAGGGGGGCATCCCACC TATCATTTGCAATGCAAGTGACCTCAAATTCCTTGACCTGTCTTACAACCATTTCAGTGG TCGTGTTCCACCTTGTCTACTAGATGGACATCTGACCATATTGAAGCTGAGACAAAACAA ATTTGAGGGGACCTTGCCTGATGACACCAAAGGAGGATGTGTTTCTCAGACAATAGACCT GAATGGAAATCAATTGGGGGGGAAGCTACCTAGATCACTCACTAACTGCAATGACCTAGA AATCCTTGATGTGGGCAACAACAATTTCGTGGACTCCTTCCCAAGCTGGACAGGGGAGCT ACCAAAGCTTAGGGTTCTTGTTCTACGATCCAACAAATTCTTCGGCGCAGTGGGGGGAAT TCCTGTCGACAACGGTGATCGAAACAGAACACAATTCTCTAGTTTGCAGATCATCGATCT TGCCTCAAACAACTTCTCTGGCAGTTTGCAGCCGCAATGGTTCGATAGCCTCAAAGCAAT GATGGTTACAAGAGAGGGTGACGTGCGAAAGGCCCTGGAGAACAACCTCTCGGGGAAATT CTACCGTGACACAGTCGTGGTCACGTACAAGGGCGCGGCCACGACATTCATCAGGGTCCT GATCGCCTTCACGATGATCGACTTCTCCGACAACGCGTTCACCGGCAACATTCCTGAATC CATTGGAAGGCTCACCTCGCTAAGAGGTCTCAACCTGTCGCATAATGCCTTCACCGGAAC AATCCCTTCTCAGCTCAGTGGATTGGCGCAGCTTGAATCGCTCGATCTCTCTTTGAACCA GCTTAGTGGGGAGATCCCAGAGGTGTTGGTGTCTTTAACTTCTGTCGGCTGGTTGAACTT GTCCTACAATCGTTTGGAGGGTGCTATTCCGCAGGGAGGTCAATTTCAGACGTTTGGAAG TAGCTCATTTGAAGGGAATGCCGCCCTATGCGGCAAACCGCTGTCTATTCGGTGCAATGG TTCGAATGCAGGGCCCCCTTCGTTGGAGCACAGTGAGAGCTGGGAGGCCCGGACAGAGAC CATTGTACTGTATATTTCCGTTGGATCAGGGTTCGGTTTGGGATTTGCAATGGCCTTCTT GTTCCAAGTGTTCCGCGGAAAGTGAAAAATGAAGCTTGGTGGTCAATAATAAATAGAGGG AAACAACAATATG