Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0480100-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:24013077:24016828:1 gene:Os04g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B. (Os04t0480100-01)
Sequence	ATGGCGAAGCCCTGGGGAGGCGTCGGCGCGTGGGCGCTGGACGCGGAGCGCGCCGAGGAG GAGGAGCGGGAGCAGGCGGCGGCGTTCCCGGCGCCCGAGCCGCCCGCGGCCGCCGGTGGC GCCGCCAGCTTCCCGAGCCTCCGCGAGGCCGCCGCGGCGGCGGGCGGGGGCAAGCAGAAG AAGAAGAACAAGGGCACCACCCTGTCGCTGTCCGAGTTCAGCGGGTACGGCGCGCAGGGG CAGCGTCGGGGCGGCGGTGGCGCCGCCCCCGTGGATCCGAGGGGGCTCACCCCCGAGGAG ATGATGATGCTGCCCACCGGCCCCAGGGAGCGCTCCGCCGAGGAGCTCGACCGCTCCCGA GGGTTCCGCTCCTACGGCGGAGGGTTTGGCGCCGGCGGCGGGGACCGCCGCGGCGGGTTC GACGACGACCGCCGCGGGCCCGGTAGGTCCTCGGATCTCGACATGCCCTCCCGCGCCGAC GAGGCGGACAACTGGGGGACGAATAAGAGGTTCACGCCGGCTCTCGGCGACTCTGGCCGC CGTGATAGGTTCGGCGGCCCCTCCCCAGCCGGCCGCTCCGATGACATCGATGACTGGTCG CGCGACAAGAAGCCGATGCCATCGCGCTACCCAAGCCTCGGTTCTGGTGGTGGTGGTGGT GGCGGCTTCCGTGAATCACCTGGTTTCCGCGACTCACCAGGCCCCTCCGACTCTGACCGT TGGTCTCGTGGTGGTAGCTTTGCGCCGATGCCGCACAACGGCGAGCGTGAGAGGCCGCGG CTCAACCTTGATCCACCGAAGCGGGATCCCTTGGCTACTGCTACGCCACCAGCTGAGGTG GCACGCAACCGGCCAAGCCCATTTGGGGCTGCAAGGCCCCGGGAGGAGGTGCTGGCTGAG AAAGGGTTGGATTGGAGGAAGATGGAGACCGAGATTGAACAGAAAACTAGCCGCCCTACC AGCTCACAGTCCAGCCGGCCGAATAGCGCACATTCCTCCCGCCCTGGGAGCCCTGGATCA CAGGTCTCAGCAGTTGGGAGTGAAGGGGCACCGAGGTCACGGCCAAAGGTAAATCCGTTT GGTAATGCCAAGCCACGGGAAGTGGTGCTGCAAGAGAAAGGGAAAGACTGGAGGAAGATA GACCTTGAGCTGGAACATCGTGCCGTTAATAGGCCAGAGACGAATGAAGAAAGGATCTTG AAAGAAGAAATAAACCTCCTCAAGGAGAAACTGAAAGAAAGTGAGGCCAATAAAACTGAT GGTCCGGACCAAGCTTCCCCTGAGGATCCAGAGGATTTGTCGGAGAAGATAACTCAGATG GAAAAGCAGCTTGAGTTGCTTACTATTGAGTTGGATGACAAGGTTCGATTTGGGCAAAGA CCTGGTTCTGGAGCTGGCAGGGTTTCAGCAGTTCCACCAGCTATTGCAGAGGAACCACAG ATTGTGGTATCCATCGTGGATAGGCCACGCTCTCGTGGTGGTATGGAGCCATTTCCGAAA CCAGCTGAGGAAAGATGGGGATTCCAAGGTAGCAGAGAGAGGGGCTCTTTTGGTGGAAGC AGAAGTTCAGACAGGCCAATGACAAGGCAGAGGTGGTGA

Peptide Sequence

PEP ID	Os04t0480100-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:24013077:24016828:1 gene:Os04g0480100 transcript:Os04t0480100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B. (Os04t0480100-01)
Sequence	MAKPWGGVGAWALDAERAEEEEREQAAAFPAPEPPAAAGGAASFPSLREAAAAAGGGKQK KKNKGTTLSLSEFSGYGAQGQRRGGGGAAPVDPRGLTPEEMMMLPTGPRERSAEELDRSR GFRSYGGGFGAGGGDRRGGFDDDRRGPGRSSDLDMPSRADEADNWGTNKRFTPALGDSGR RDRFGGPSPAGRSDDIDDWSRDKKPMPSRYPSLGSGGGGGGGFRESPGFRDSPGPSDSDR WSRGGSFAPMPHNGERERPRLNLDPPKRDPLATATPPAEVARNRPSPFGAARPREEVLAE KGLDWRKMETEIEQKTSRPTSSQSSRPNSAHSSRPGSPGSQVSAVGSEGAPRSRPKVNPF GNAKPREVVLQEKGKDWRKIDLELEHRAVNRPETNEERILKEEINLLKEKLKESEANKTD GPDQASPEDPEDLSEKITQMEKQLELLTIELDDKVRFGQRPGSGAGRVSAVPPAIAEEPQ IVVSIVDRPRSRGGMEPFPKPAEERWGFQGSRERGSFGGSRSSDRPMTRQRW

Transcript Sequence

Transcript ID	Os04t0480100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:24013077:24016828:1 gene:Os04g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 4B. (Os04t0480100-01)
Sequence	ACCAGAAGCGCAAGCGACTCCTCTCTCTCTCACCTCCGCTCGCCTCCGCGCCTCCGAGCA CCAAACCCTAGATCTCGCGGCGGCGGCGGCGACCGGGGATGGCGAAGCCCTGGGGAGGCG TCGGCGCGTGGGCGCTGGACGCGGAGCGCGCCGAGGAGGAGGAGCGGGAGCAGGCGGCGG CGTTCCCGGCGCCCGAGCCGCCCGCGGCCGCCGGTGGCGCCGCCAGCTTCCCGAGCCTCC GCGAGGCCGCCGCGGCGGCGGGCGGGGGCAAGCAGAAGAAGAAGAACAAGGGCACCACCC TGTCGCTGTCCGAGTTCAGCGGGTACGGCGCGCAGGGGCAGCGTCGGGGCGGCGGTGGCG CCGCCCCCGTGGATCCGAGGGGGCTCACCCCCGAGGAGATGATGATGCTGCCCACCGGCC CCAGGGAGCGCTCCGCCGAGGAGCTCGACCGCTCCCGAGGGTTCCGCTCCTACGGCGGAG GGTTTGGCGCCGGCGGCGGGGACCGCCGCGGCGGGTTCGACGACGACCGCCGCGGGCCCG GTAGGTCCTCGGATCTCGACATGCCCTCCCGCGCCGACGAGGCGGACAACTGGGGGACGA ATAAGAGGTTCACGCCGGCTCTCGGCGACTCTGGCCGCCGTGATAGGTTCGGCGGCCCCT CCCCAGCCGGCCGCTCCGATGACATCGATGACTGGTCGCGCGACAAGAAGCCGATGCCAT CGCGCTACCCAAGCCTCGGTTCTGGTGGTGGTGGTGGTGGCGGCTTCCGTGAATCACCTG GTTTCCGCGACTCACCAGGCCCCTCCGACTCTGACCGTTGGTCTCGTGGTGGTAGCTTTG CGCCGATGCCGCACAACGGCGAGCGTGAGAGGCCGCGGCTCAACCTTGATCCACCGAAGC GGGATCCCTTGGCTACTGCTACGCCACCAGCTGAGGTGGCACGCAACCGGCCAAGCCCAT TTGGGGCTGCAAGGCCCCGGGAGGAGGTGCTGGCTGAGAAAGGGTTGGATTGGAGGAAGA TGGAGACCGAGATTGAACAGAAAACTAGCCGCCCTACCAGCTCACAGTCCAGCCGGCCGA ATAGCGCACATTCCTCCCGCCCTGGGAGCCCTGGATCACAGGTCTCAGCAGTTGGGAGTG AAGGGGCACCGAGGTCACGGCCAAAGGTAAATCCGTTTGGTAATGCCAAGCCACGGGAAG TGGTGCTGCAAGAGAAAGGGAAAGACTGGAGGAAGATAGACCTTGAGCTGGAACATCGTG CCGTTAATAGGCCAGAGACGAATGAAGAAAGGATCTTGAAAGAAGAAATAAACCTCCTCA AGGAGAAACTGAAAGAAAGTGAGGCCAATAAAACTGATGGTCCGGACCAAGCTTCCCCTG AGGATCCAGAGGATTTGTCGGAGAAGATAACTCAGATGGAAAAGCAGCTTGAGTTGCTTA CTATTGAGTTGGATGACAAGGTTCGATTTGGGCAAAGACCTGGTTCTGGAGCTGGCAGGG TTTCAGCAGTTCCACCAGCTATTGCAGAGGAACCACAGATTGTGGTATCCATCGTGGATA GGCCACGCTCTCGTGGTGGTATGGAGCCATTTCCGAAACCAGCTGAGGAAAGATGGGGAT TCCAAGGTAGCAGAGAGAGGGGCTCTTTTGGTGGAAGCAGAAGTTCAGACAGGCCAATGA CAAGGCAGAGGTGGTGAGATACGGCGTTTGAGCATTTGTTAAGGAAACTCTGGGTCCTCG TTTTTTGTTTCGAAAGAATGGGGAAGAATAAGTCATTTTCTTCTGTGTTTTGACTCCCAT TTTGTCTGATCTAGAAAGATTGGAGAGAAGCTTGTCAATGGAGGTTACTCTGCGTGAAGC TATTTATTATCGCCTCTTAAGTTGTAGGGTATTTTGGTTCCCTTTTTGTCATCTCCCATG CCAAAACAAGACCTGGCAAACTTTGATACTAACTATTGTTCCTGATCGGTTCATGTCGCA TGTGGTCTCTTAAGCATTCATGGATGGAGACCTTTTGTATGGATATTTTGATATTTTGTA CAGTTGCATGTGTTAGCC