Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0479200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23964000:23967781:-1 gene:Os04g0479200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent isocitrate dehydrogenase c;1. (Os04t0479200-01)
Sequence	ATGGCGCGGCGATCCGCCCCCCTCCTCCGCCGCATCCTCTCCTCCCCGGCCCCCGCCCCG GCGCACCATGGCGGCGCCGGCGCGCGCCGCACGGTGACCTACATGCCCAGGCCAGGGGAC GGGAACCCGCGCGCCGTGACGCTGATCCCGGGGGACGGGATCGGGCCGCTCGTGACGGGG GCCGTGCAGCAGGTGATGGAGGTGATGCACGCGCCGGTCTACTTCGAGACCTACGAGGTC CGCGGCGACATGCCCACCGTGCCGCCCGCCGTCATCGAGTCCATCCGCCGCAACAAGGTG TGCCTCAAGGGCGGCCTCGCCACCCCCGTCGGCGGCGGGGTCTCCTCCCTCAACATGCAG CTCCGCAAGGAGCTCGACCTCTACGCCTCGCTCGTCAACTGCTCCAACTTCCCCGGCCTC CCCACCAGGCACCAGGACGTCGACATCGTCGTCATCAGGGAGAACACCGAGGGGGAGTAC TCGGGGCTCGAGCACGAGGTCGTGCCCGGCGTCGTCGAGAGCCTCAAGGTGATAACAAAG TTTTGCTCTGAGAGGATTGCCAAATATGCTTTTGAGTATGCTTACCTTAACAACCGAAAG AAAGTCACAGCAGTGCATAAAGCAAACATCATGAAGCTTGCTGATGGTTTGTTCTTGGAA TCTTGCCGTGAGGTTGCCTCAAAGTATCCTGGTATTCAGTATAATGAGATCATTGTCGAC AACTGCTGTATGCAACTTGTTGCAAAGCCTGAGCAATTTGATGTCATGGTTACACCAAAC CTTTATGGCAATTTGGTTGCTAACACGGCTGCAGGTATTGCTGGAGGGACAGGTGTTATG CCTGGAGGTAATGTGGGTCAGGACCATGCTGTCTTTGAGCAAGGTGCTTCTGCAGGAAAC GTCGGAAACGAGAACATCTTAGAGCAGAAGAAAGCAAACCCTATTGCGCTGCTTCTATCA TCCGCCATGATGTTGAGGCATTTGCAGTTCCCGTCATTCGCCGACCGGCTGGAGACGGCG GTGAAGCGTGTCATTGCGGAAGGCAAGTACAGAACAAAGGATCTAGGCGGCACCAGCACC ACCCAGGAAGTCACTGATGCAGTAATCGCCAATCTGGATTAG

Peptide Sequence

PEP ID	Os04t0479200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23964000:23967781:-1 gene:Os04g0479200 transcript:Os04t0479200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent isocitrate dehydrogenase c;1. (Os04t0479200-01)
Sequence	MARRSAPLLRRILSSPAPAPAHHGGAGARRTVTYMPRPGDGNPRAVTLIPGDGIGPLVTG AVQQVMEVMHAPVYFETYEVRGDMPTVPPAVIESIRRNKVCLKGGLATPVGGGVSSLNMQ LRKELDLYASLVNCSNFPGLPTRHQDVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITK FCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVASKYPGIQYNEIIVD NCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGQDHAVFEQGASAGN VGNENILEQKKANPIALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDLGGTST TQEVTDAVIANLD

Transcript Sequence

Transcript ID	Os04t0479200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23964000:23967781:-1 gene:Os04g0479200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent isocitrate dehydrogenase c;1. (Os04t0479200-01)
Sequence	CTTCCCTTTCTCCTCCTCTCTCCTCTTCCCCTCTCCAAGTCTCCCGGTCTCCTTCCTCCT CTCTTCCCGGCCGCCTCGCCTCGCCTCCGCCTTCCCGATCGCAATTCGCCTCCTCCTCCT CCCACCCATGGCGCGGCGATCCGCCCCCCTCCTCCGCCGCATCCTCTCCTCCCCGGCCCC CGCCCCGGCGCACCATGGCGGCGCCGGCGCGCGCCGCACGGTGACCTACATGCCCAGGCC AGGGGACGGGAACCCGCGCGCCGTGACGCTGATCCCGGGGGACGGGATCGGGCCGCTCGT GACGGGGGCCGTGCAGCAGGTGATGGAGGTGATGCACGCGCCGGTCTACTTCGAGACCTA CGAGGTCCGCGGCGACATGCCCACCGTGCCGCCCGCCGTCATCGAGTCCATCCGCCGCAA CAAGGTGTGCCTCAAGGGCGGCCTCGCCACCCCCGTCGGCGGCGGGGTCTCCTCCCTCAA CATGCAGCTCCGCAAGGAGCTCGACCTCTACGCCTCGCTCGTCAACTGCTCCAACTTCCC CGGCCTCCCCACCAGGCACCAGGACGTCGACATCGTCGTCATCAGGGAGAACACCGAGGG GGAGTACTCGGGGCTCGAGCACGAGGTCGTGCCCGGCGTCGTCGAGAGCCTCAAGGTGAT AACAAAGTTTTGCTCTGAGAGGATTGCCAAATATGCTTTTGAGTATGCTTACCTTAACAA CCGAAAGAAAGTCACAGCAGTGCATAAAGCAAACATCATGAAGCTTGCTGATGGTTTGTT CTTGGAATCTTGCCGTGAGGTTGCCTCAAAGTATCCTGGTATTCAGTATAATGAGATCAT TGTCGACAACTGCTGTATGCAACTTGTTGCAAAGCCTGAGCAATTTGATGTCATGGTTAC ACCAAACCTTTATGGCAATTTGGTTGCTAACACGGCTGCAGGTATTGCTGGAGGGACAGG TGTTATGCCTGGAGGTAATGTGGGTCAGGACCATGCTGTCTTTGAGCAAGGTGCTTCTGC AGGAAACGTCGGAAACGAGAACATCTTAGAGCAGAAGAAAGCAAACCCTATTGCGCTGCT TCTATCATCCGCCATGATGTTGAGGCATTTGCAGTTCCCGTCATTCGCCGACCGGCTGGA GACGGCGGTGAAGCGTGTCATTGCGGAAGGCAAGTACAGAACAAAGGATCTAGGCGGCAC CAGCACCACCCAGGAAGTCACTGATGCAGTAATCGCCAATCTGGATTAGATACCAGCCGG TGCACGCCTGAGAGATTAATTCTTTTGGGGGACTAGCTCATTTGTCCCGACTCCCGATTA TTTTTGTTTCGTATAGAGTTTAGATCGTCAATTTGTACGACGCTTCCCAGGAAGGAATCG TGAGGCAATATCTGTTTCTTAGTTCTGTTCCACAAATAATTCAGGAACCCACGAGGAGTA TTCTTCACACGATGCTGTGTAACAAGGTAAAGAGAACACCTTTTGTTGCAAAGGGAAATG CTGGCAGCCTTAATTCCTTTAACTGAAATGATTATGAGAGTTGATTATCGGTCCTCAGCC GCGGCTGTGTCTCCATGGACCTCAAGACCGTTGTTTCC