Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0479000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:23955481:23959963:1 gene:Os04g0479000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CENTRAL REGION COMPONENT1 description:Similar to OSIGBa0116M22.9 protein. (Os04t0479000-01);Synaptonemal complex component, Initiation of meiotic recombination, Recruitment of PAIR2 onto meiotic chromosomes (Os04t0479000-02)
Sequence	ATGAGCGCCCCCATGGAGGTCTCCTTCTCCGCGCCGCCTCCTCCGGATGCGGCATCTGCT GCCGCCGCGGCCCCATCGCTGGTGCCCGCCGTGTCGGCGGCGGCGGTGGCGGCGACCACC GTTTCCTGCTCGCCGCAGCCACCGACGGGGTCGCCCTCGGCCGACGACAGGATCCTCGTT TCAGTTGAAGTGCTTCTGCACGCCACTAGCACAGCTCGAGCCGAGGACGTCTGCGCTGCG GTGGAGAGGATGTTAGAAGCTCGAAGCTTAAGCTATGTTGATGGTCCTGTCCCGATTCCT AATGATGATCCTTTTCTTCTTGCAAATGTTAAAAGGATCCAAATCTGCGACACTGATGAG TGGACTGAGAATCACAAAGTTCTGTTATTTTGGCAAGTCAGGCCTGTTGTTCATGTGTTC CAGTTGAGCGAAGATGGTCCAGGTGAGGAGCCGGGTGAGGACGATACACTCTCTAGCTTC AATGAGTGGGCTCTGCCTGCCAAAGAATTTGATGGGTTGTGGGAAAGCTTACTCTATGAA GTTGGTCTCAAGCAGAGGTTGCTGAGATATGCTGCTAGTGCTTTGCTGTTTACTGAAAAG GGTGTAGACCCATGTCTTGTTTCCTGGAACAGGATTGTACTTTTGCATGGTCCACCTGGA ACAGGAAAGACTTCCTTGTGTAAAGCACTTGCTCAAAAACTTTCCATTCGCTTCAAGTCA AGGTATTCCATGTGTCAATTGATTGAAGTCAATGCCCATTCACTGTTCAGCAAGTGGTTT TCTGAAAGCGGAAAACTGGTGGCCAAACTTTTCCAGAAGATCCAGGAGATGGTGGAAGAA GAAAGCAACCTGGTATTTGTATTGATAGATGAAGTTGAAAGCCTAGCTGCTGCCAGACAG GCTGCCATATCTGGATCTGAACCTTCAGATTCCATAAGGGTTGTAAATGCATTACTTACA CAAATGGACAAACTCAAGTCTTGGCCAAATGTTATCATTTTGACAACATCAAATATCACC ACAGCTATTGATATTGCATTTGTTGATAGAGCAGACATCAAGGCATACGTTGGACCCCCA ACCCTTCAAGCACGATACGAAATTTTGAGGTCATGCTTACAGGAACTTTTGCGAGTTGGA ATTCTTACACATACTCAGGGTGGCAATTCTCTTTGCCTTTTGAGTTATTTTAGCCTGATG GAGAACCAGCACTGTCCTGAGGTCGCAGATCCTCATGGTTCGGTTCATCTCTCTGGCCTA CTCCATAAAGCTGCAGAAATATGTGAGGGATTAAGCGGTCGAACATTGAGGAAACTTCCT TTCCTGGCACATGCTTCTGTTGCTAACCCTTCATGCTGCGATGCCTCTGCTTTCCTGCAC GCTTTGATACAGACTGCTCAAAGAGAGCTCTCCGAGTCGCGTGGTTGA

Peptide Sequence

PEP ID	Os04t0479000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:23955481:23959963:1 gene:Os04g0479000 transcript:Os04t0479000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CENTRAL REGION COMPONENT1 description:Similar to OSIGBa0116M22.9 protein. (Os04t0479000-01);Synaptonemal complex component, Initiation of meiotic recombination, Recruitment of PAIR2 onto meiotic chromosomes (Os04t0479000-02)
Sequence	MSAPMEVSFSAPPPPDAASAAAAAPSLVPAVSAAAVAATTVSCSPQPPTGSPSADDRILV SVEVLLHATSTARAEDVCAAVERMLEARSLSYVDGPVPIPNDDPFLLANVKRIQICDTDE WTENHKVLLFWQVRPVVHVFQLSEDGPGEEPGEDDTLSSFNEWALPAKEFDGLWESLLYE VGLKQRLLRYAASALLFTEKGVDPCLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFKS RYSMCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARQ AAISGSEPSDSIRVVNALLTQMDKLKSWPNVIILTTSNITTAIDIAFVDRADIKAYVGPP TLQARYEILRSCLQELLRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGL LHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSESRG

Transcript Sequence

Transcript ID	Os04t0479000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23955481:23959963:1 gene:Os04g0479000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CENTRAL REGION COMPONENT1 description:Similar to OSIGBa0116M22.9 protein. (Os04t0479000-01);Synaptonemal complex component, Initiation of meiotic recombination, Recruitment of PAIR2 onto meiotic chromosomes (Os04t0479000-02)
Sequence	CAATCCAAAAACCCTAGCGGAGAAATCTCTCCCCTCACCGTCCCGCGCGCTGCTCGGCCG CCATGAGCGCCCCCATGGAGGTCTCCTTCTCCGCGCCGCCTCCTCCGGATGCGGCATCTG CTGCCGCCGCGGCCCCATCGCTGGTGCCCGCCGTGTCGGCGGCGGCGGTGGCGGCGACCA CCGTTTCCTGCTCGCCGCAGCCACCGACGGGGTCGCCCTCGGCCGACGACAGGATCCTCG TTTCAGTTGAAGTGCTTCTGCACGCCACTAGCACAGCTCGAGCCGAGGACGTCTGCGCTG CGGTGGAGAGGATGTTAGAAGCTCGAAGCTTAAGCTATGTTGATGGTCCTGTCCCGATTC CTAATGATGATCCTTTTCTTCTTGCAAATGTTAAAAGGATCCAAATCTGCGACACTGATG AGTGGACTGAGAATCACAAAGTTCTGTTATTTTGGCAAGTCAGGCCTGTTGTTCATGTGT TCCAGTTGAGCGAAGATGGTCCAGGTGAGGAGCCGGGTGAGGACGATACACTCTCTAGCT TCAATGAGTGGGCTCTGCCTGCCAAAGAATTTGATGGGTTGTGGGAAAGCTTACTCTATG AAGTTGGTCTCAAGCAGAGGTTGCTGAGATATGCTGCTAGTGCTTTGCTGTTTACTGAAA AGGGTGTAGACCCATGTCTTGTTTCCTGGAACAGGATTGTACTTTTGCATGGTCCACCTG GAACAGGAAAGACTTCCTTGTGTAAAGCACTTGCTCAAAAACTTTCCATTCGCTTCAAGT CAAGGTATTCCATGTGTCAATTGATTGAAGTCAATGCCCATTCACTGTTCAGCAAGTGGT TTTCTGAAAGCGGAAAACTGGTGGCCAAACTTTTCCAGAAGATCCAGGAGATGGTGGAAG AAGAAAGCAACCTGGTATTTGTATTGATAGATGAAGTTGAAAGCCTAGCTGCTGCCAGAC AGGCTGCCATATCTGGATCTGAACCTTCAGATTCCATAAGGGTTGTAAATGCATTACTTA CACAAATGGACAAACTCAAGTCTTGGCCAAATGTTATCATTTTGACAACATCAAATATCA CCACAGCTATTGATATTGCATTTGTTGATAGAGCAGACATCAAGGCATACGTTGGACCCC CAACCCTTCAAGCACGATACGAAATTTTGAGGTCATGCTTACAGGAACTTTTGCGAGTTG GAATTCTTACACATACTCAGGGTGGCAATTCTCTTTGCCTTTTGAGTTATTTTAGCCTGA TGGAGAACCAGCACTGTCCTGAGGTCGCAGATCCTCATGGTTCGGTTCATCTCTCTGGCC TACTCCATAAAGCTGCAGAAATATGTGAGGGATTAAGCGGTCGAACATTGAGGAAACTTC CTTTCCTGGCACATGCTTCTGTTGCTAACCCTTCATGCTGCGATGCCTCTGCTTTCCTGC ACGCTTTGATACAGACTGCTCAAAGAGAGCTCTCCGAGTCGCGTGGTTGATTGATTCCAT GCCGGTCACTTCGAAGAGCAAATTGCTAACAGTTTCAATTCCAGAGATAGTTTTTAAGGG ACCTCAAAGATAGCTGGAAGCTAATTCAGAGCCTGGTGCTAAATACCGGCAGACCCCTGC AATCTTTAGGTTTAGAACAGCAGAAGTCCAGAATAGATCTGATTGTTGCTTTGATACTTT TGTGTTTTGTAGATTATTATATATATAGTATATTGTGCCTCGAAGGATGTCACTGAGTTA AACCAGAAACAAGACTTGATTCGAGTTGCTGAATGTTTAAAAGCA