Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0477900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23912885:23915134:1 gene:Os04g0477900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-). (Os04t0477900-01)
Sequence	ATGACAACAATGTCGTCGAGGCTCGCATCTCGCGCCGCCCGCTTAGCTGCGGTGGCGGCA TCTCGCGCCGCCCGCTTAGCTGCGGCGTCCGCATCTCGTACCGGGGCCGGGGACCCCTCA GCGCGGGCCACCGCCACTGCCGCATCTCGCGCCGCTCGCTTAGCTGCGGCGGCCGCATCT CATGCCGGAGGCCCCACAGCGCGCGCGATTGCGGCTGCCGTATCTCGCGCCGCCCGCTCA ATCTCCTCGAAGCTCCTTGACGACGACATCGCTGCCCGCCTCTCCTTCCGCTACAGCACC GAGCCCCCAGATGATGGTAAGTGCGTTACAGCCAAGGACCTCGAGTCAGATCAAGCCGTA TGGGCCTTATATGAGCGCTGGTGCAAGTCATACAACAAGAAGCGTGACCATGCTGAGATG ATTCGCCGGTTCGACATATTCAAGCTGAAAGCATCGCTTGTGCACAGCTGGAACAATTAT GTTCATGAAGACAAAGAGGAATTAGCTCGTGCAAAAAAGAGAAGGGATTTAGGCAAACCT GTCGATCCTTGGTACCTACAAGAGGAATTAGGCCCATCCGCCGATGGGGGAGACACTGTT AACCAATACTGGCGGGGCATGTTGAAGGAAAATGACCAAGGGATGGATCTGCCTGACATC CAAGGAGGAAAAAAAATGAGCACTGAAGATTGA

Peptide Sequence

PEP ID	Os04t0477900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23912885:23915134:1 gene:Os04g0477900 transcript:Os04t0477900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-). (Os04t0477900-01)
Sequence	MTTMSSRLASRAARLAAVAASRAARLAAASASRTGAGDPSARATATAASRAARLAAAAAS HAGGPTARAIAAAVSRAARSISSKLLDDDIAARLSFRYSTEPPDDGKCVTAKDLESDQAV WALYERWCKSYNKKRDHAEMIRRFDIFKLKASLVHSWNNYVHEDKEELARAKKRRDLGKP VDPWYLQEELGPSADGGDTVNQYWRGMLKENDQGMDLPDIQGGKKMSTED

Transcript Sequence

Transcript ID	Os04t0477900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23912885:23915134:1 gene:Os04g0477900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cysteine proteinase EP-B 1 precursor (EC 3.4.22.-). (Os04t0477900-01)
Sequence	AGATTCCTATCCTCTCTCGCCATGACAACAATGTCGTCGAGGCTCGCATCTCGCGCCGCC CGCTTAGCTGCGGTGGCGGCATCTCGCGCCGCCCGCTTAGCTGCGGCGTCCGCATCTCGT ACCGGGGCCGGGGACCCCTCAGCGCGGGCCACCGCCACTGCCGCATCTCGCGCCGCTCGC TTAGCTGCGGCGGCCGCATCTCATGCCGGAGGCCCCACAGCGCGCGCGATTGCGGCTGCC GTATCTCGCGCCGCCCGCTCAATCTCCTCGAAGCTCCTTGACGACGACATCGCTGCCCGC CTCTCCTTCCGCTACAGCACCGAGCCCCCAGATGATGGTAAGTGCGTTACAGCCAAGGAC CTCGAGTCAGATCAAGCCGTATGGGCCTTATATGAGCGCTGGTGCAAGTCATACAACAAG AAGCGTGACCATGCTGAGATGATTCGCCGGTTCGACATATTCAAGCTGAAAGCATCGCTT GTGCACAGCTGGAACAATTATGTTCATGAAGACAAAGAGGAATTAGCTCGTGCAAAAAAG AGAAGGGATTTAGGCAAACCTGTCGATCCTTGGTACCTACAAGAGGAATTAGGCCCATCC GCCGATGGGGGAGACACTGTTAACCAATACTGGCGGGGCATGTTGAAGGAAAATGACCAA GGGATGGATCTGCCTGACATCCAAGGAGGAAAAAAAATGAGCACTGAAGATTGAACATGT TACATAAGAGCGATTTAATTTGCTTATGGAAATCCCTTACCCTCAAGGAGTTGAACTTAG CTCCCCATATAAATCAACTGTAATAATAAGTTATGATTTGCCGTTCCATGTGTAGTCTAT GCTTATGTCGTACCATCTTATCTAAGTGGTCATGAATTCCATATGCTTCCGCCTGTGGGA AGTTTGTGTATTTTAGCCTTTTGGGTTTACGGGCACAAGTGTTCAAACAGATCAAGATCA AGTGTGAAGATGGTATATATGTCAGTTGTTTGTACATT