Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0477500-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:23893474:23896411:-1 gene:Os04g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA124 description:Glycosyl transferase, family 17 protein. (Os04t0477500-01);Glycosyl transferase, family 17 protein. (Os04t0477500-02);Glycosyl transferase, family 17 protein. (Os04t0477500-03)
Sequence	ATGCCGGAGACCGGGCCCTACGGCCACAAGAAGACCGACGGCATCTGCGACGGCGTGTGC GGCGAGCCTGCGTCAAAGGCAGTTCTGACCATGTCGAGGCTGAGATGTGCACTTCGGGGA TTTGATTTCAGAGCACTATTGGCCCTATTGATAGGAGTGCCAATTCTAATTTTAATGATA TATGCTCATGGTCAGAAGGTCACATACTTCCTCAGGCCAATATGGGAGTCTCCTCCCAAG CCCTTCAAAACTATCCCTCATTACTACCATGAGAATGTCACCATGGCGAAACTCTGCAAG TTGCATGGGTGGAAAGTCCGGGAGACCCCACGACGTGTCTTCGATGCTGTACTATTCAGC AATGAGCTCGATATTCTTGAAATACGTTGGAATGAACTAAGCCCCTATGTCTCAGAGTTT GTGCTGCTTGAGTCGAACTCAACCTTCACTGGATTGAAAAAGCCCCTGCACTTCAAGGAA AATCGTCATCGATTTGGATTTGCTGAATCACGGCTGACATATGGTATGATTGGGGGAAGG TTCGTGAAGGGAGAAAACCCATTTGTTGAGGAGTCATATCAGAGGGTTGCCCTGGACCAG CTTATTAAGATTGCAAAAATAGAAGATGATGACCTGTTGATCATGTCAGATGTTGATGAA ATCCCAAGTGGCCACACAATTGATCTCCTGAGATGGTGCGACGACATTCCTGAGATCCTT CATCTTCAGCTTAGGAATTACCTCTACTCATTTGAATTTTTCCTGGATGACAAAAGTTGG AGGGCATCGATACACAGGTACAGGTCTGGGAAGACAAGATATGCACACTTCCGGCAGACA GATGAGCTTCTTGCTGATTCAGGGTGGCACTGCAGTTTTTGCTTTCGCTACATTAGTGAT TTTGCCTTCAAAATGCAAGCTTACAGCCATGTCGATCGGATTAGATTTAAGTACTTCCTG AACCCTGAAAGGATTCAAGATGTTATATGCAGAGGGGCGGATCTTTTTGACATGCTTCCT GAAGAGTACACGTTCCAAGAGATCATTGCCAAGTTGGGGCCGATTCCAAGCACATTTTCT GCTGTTCATCTTCCTAGCTATCTGCTACAGAATGTTGATCGGTACAGATACCTTCTCCCA GGGTACTGCAGGAGAGAAAGTGGGTAG

Peptide Sequence

PEP ID	Os04t0477500-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:23893474:23896411:-1 gene:Os04g0477500 transcript:Os04t0477500-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA124 description:Glycosyl transferase, family 17 protein. (Os04t0477500-01);Glycosyl transferase, family 17 protein. (Os04t0477500-02);Glycosyl transferase, family 17 protein. (Os04t0477500-03)
Sequence	MPETGPYGHKKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMI YAHGQKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFS NELDILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGR FVKGENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEIL HLQLRNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISD FAFKMQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFS AVHLPSYLLQNVDRYRYLLPGYCRRESG

Transcript Sequence

Transcript ID	Os04t0477500-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23893474:23896411:-1 gene:Os04g0477500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA124 description:Glycosyl transferase, family 17 protein. (Os04t0477500-01);Glycosyl transferase, family 17 protein. (Os04t0477500-02);Glycosyl transferase, family 17 protein. (Os04t0477500-03)
Sequence	GGGCAACGCCCAGAAGCGTCCGCCTCCCCCTCCCTCCGAGGGCGAGATCGGAACAAGGCC CCCACCCAACCACCGCCGCCGCCGCCACCGGCGATCGCCGGCGACCCCCGGGCCACGGGA GGCGCCCCGCCCTCCTCGCCATTGGAGAGGACCTTCTCTCCTGCTCGGATTCGTTTGCTC TGGTGGTGGTGGTGGGGCTTTGCTGGCGCGAGGCCGCGCCTGCCATGCCGGAGACCGGGC CCTACGGCCACAAGAAGACCGACGGCATCTGCGACGGCGTGTGCGGCGAGCCTGCGTCAA AGGCAGTTCTGACCATGTCGAGGCTGAGATGTGCACTTCGGGGATTTGATTTCAGAGCAC TATTGGCCCTATTGATAGGAGTGCCAATTCTAATTTTAATGATATATGCTCATGGTCAGA AGGTCACATACTTCCTCAGGCCAATATGGGAGTCTCCTCCCAAGCCCTTCAAAACTATCC CTCATTACTACCATGAGAATGTCACCATGGCGAAACTCTGCAAGTTGCATGGGTGGAAAG TCCGGGAGACCCCACGACGTGTCTTCGATGCTGTACTATTCAGCAATGAGCTCGATATTC TTGAAATACGTTGGAATGAACTAAGCCCCTATGTCTCAGAGTTTGTGCTGCTTGAGTCGA ACTCAACCTTCACTGGATTGAAAAAGCCCCTGCACTTCAAGGAAAATCGTCATCGATTTG GATTTGCTGAATCACGGCTGACATATGGTATGATTGGGGGAAGGTTCGTGAAGGGAGAAA ACCCATTTGTTGAGGAGTCATATCAGAGGGTTGCCCTGGACCAGCTTATTAAGATTGCAA AAATAGAAGATGATGACCTGTTGATCATGTCAGATGTTGATGAAATCCCAAGTGGCCACA CAATTGATCTCCTGAGATGGTGCGACGACATTCCTGAGATCCTTCATCTTCAGCTTAGGA ATTACCTCTACTCATTTGAATTTTTCCTGGATGACAAAAGTTGGAGGGCATCGATACACA GGTACAGGTCTGGGAAGACAAGATATGCACACTTCCGGCAGACAGATGAGCTTCTTGCTG ATTCAGGGTGGCACTGCAGTTTTTGCTTTCGCTACATTAGTGATTTTGCCTTCAAAATGC AAGCTTACAGCCATGTCGATCGGATTAGATTTAAGTACTTCCTGAACCCTGAAAGGATTC AAGATGTTATATGCAGAGGGGCGGATCTTTTTGACATGCTTCCTGAAGAGTACACGTTCC AAGAGATCATTGCCAAGTTGGGGCCGATTCCAAGCACATTTTCTGCTGTTCATCTTCCTA GCTATCTGCTACAGAATGTTGATCGGTACAGATACCTTCTCCCAGGGTACTGCAGGAGAG AAAGTGGGTAGATTTTGATGATCTACACTCTTCAATCTGATGTGCAGGCCTGTCACTGCC ATGTTCTCCACCTCCGAGATTGGCTGGCCGTGACGGTTGCATCTGATATGATTGGCTAAC TTAGCTGGATGATTGCTTGGGATGAGTGGCTATGGATGATTTCATCATCCTTCACTGTGC AATCTAACACCGGACGACCCTACAGGCTACAGCATAGTGTATGCTCGGTCGTGGCATGGT TACCTTCCCAGAGGAGCTCATTACCCTGTGGTAGCCACCACAAGTTCACCTGTCATTCAT ATTACTTCCCTGATTGATACATAAACTGAGAACTGCTGTAGATTGCAAAATCAAGTGAGA TTTCAGATTTATATGCTGTAGAACTAGCATTACCCTGCAGATAATCCACACATGCTTTTA TTCTC