Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0476800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23867557:23872076:-1 gene:Os04g0476800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA5 protein (Fragment). (Os04t0476800-01)
Sequence	ATGTCTCGCCGCCGGGACGCTGCGCCGACGGCGCGCGAGGGCGAGAGGGATCTCGTCGTG AAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATGGTCCGCACTTT GATCTTAATCTGGCTGCTCTTCGGTCAAAGATTGCGAGTGCTTTTAAGTTCAATCCAGAT ACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATACTGGATGATGAT AGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGATTAATGTTGAG TTGAAGAGCAGCAGTGATGGGGTACATCAGACAAAACAGCAGGTATTGGATTCCATATCT GTAATGTCCACTGCTCTGGAAGATCAATTGGCTCAGGTGAAATTAGCTATCGATGAAGCT TTAAAATTTGTACCAGAACAAGTTCCCACTGTCCTTGCAAAAATATCACATGACTTGCGT TCTAAAGCTGCATCATCAGCGCCATCATTGGCTGATTTGCTGGACCGGCTTGCTAAACTG ATGGCACCAAAGAGCAAAATGCAGTCTTCCAGTGGTTCTGCTGATGGTTCATCTGGCTCC TCTAGTGGTAGGGGACAAACTTTGGGAAGTTTGAATATTAAAAATGACACTGAGCTCATG GCTGTTTCAGCTTCGAACCCTCTGGATATGCATAACTCTGGATCAACTAAATCACTTGGT CTTAAGGGTGTGCTTCTTGATGACATCAAAGCTCAAGCTGAACATGTATCGGGATATCCT TATTATGTGGATACCCTTTCAGGCTGGGTAAAAGTTGATAACAAGGGAAGTACCAATGCC CAAAGTAAGGGCAAGTCTGTTACATCCTCTGCTGTGCCACAAGTTACTAGCATTGGTCAT GGTGCACCTACTGTTCATTCTGCTCCTGCTTCAGATTGCGGTGAAGGGTTAAGAAGTGAT CTTTTCTGGACACAACTAGGCCTTTCTTCTGAGTCCTTTGGGCCTAATGGCCAGATTGGT GGTGATTTGAACTCGACATGCCCTCCTCCACCACTGTTTCCCCGTTACCCACTTCAGTCT CTCCGAGCTGATAAAAGCAGTATCAAGGGTGGTTGCTCTTACCCTCCGTGCATCTGCAAA AGTAGCACATCTAAGCCTGAGAATCTCTCCCATTACCCAGTTCAGTCCCTCCAAGCTGAC AGAAGCCTAAAGGGTGGTCACTATTTCCCTCCATGCACCTGCAAAAGTAACACATCCAAG CCAGATAATCTCTCACCAGTCGGTCTTTATGGACCTTATTCTGAAGGCAGCAGCTGTAAT AGGTGCCCATACAGGGATCTAAGTGATAAGCACGAGAGCATGGCGCAGCACACACTGCAT AGATGGATACAGTGCGATGGCTGTGGGGTCACTCCTATCGCTGGTTCTCGCTACAAGTCA AATATTAAAGATGATTATGATTTATGCAATACCTGTTTTTCTCGAATGGGCAATGTGAAT GAATATACCAGAATAGACAGACCATCTTTTGGGAGTAGACGATGTAGAGACCTCAATCAG AACCAGATGCTCTTTCCACATCTTCGACAGCTACATGATTGCCGCTTCATTAAGGATGTT ACTGTCCCTGATGGAACAGTAATGGCACCATCAACCCCATTTACAAAGATTTGGCGCATA CATAACAATGGATCTTCCATGTGGCCATATGGGACATGTCTTACCTGGGTTGGTGGACAT CTATTTGCACGCAACAGCTCAGTTAAATTAGGGATCTCGGTGGATGGTTTCCCTATTGAT CAAGAGATCGATGTTGGTGTTGATTTTGTCACACCTGCAAAGCCTGGTGGGTACGTGTCG TACTGGAGATTGGCATCACCCACTGGCCAGATGTTTGGTCAGCGAGTTTGGGTTTTTATT CAGGTGGAGCACCCGGTCAAAACCAGTAGCAACAAGCAGAGTGCTGCTATAAACTTGAAC ATGCCCCCAGAAGGAAGCAACACAGAATGGAAGCATTCTGTTGATGCAAATATTCAGTCT GCAGATATTGTGGGTAAATACTCTGGAAGCACCATAACTGATCCTCTTGCACATGCACTA TACCATGAAGCCACCAAACCGATGGAACCTGAGCTTGTTTCAAGTGCCGTACCTTCTGTA CCTAGAGCATTTGAATCAGTGCTAGTGCCAGCTACTGATCTCCTCACTTCATCTGCTGGA GCTGAAAAGGCTTCGAAGCCTGCTGCCACGCCTGGACCTGCACCTCAAGCCGTTCCCCTG CCAAAACCTGTTAGCATTCCTGCATCTGGACCTGCGCCTGCTCCTGTTAGTGCGACTACC GCTGCACCTGTCGGAGCTGCTGCTGCTCCTATCAGTGAGCCCACTGCACCTGCTGCTGCC ATTGGAATGCCCTCTGCAACTGCTCGCGCTGCTTCTTGCCTGCCTACCGAGCCTTCATCT GATCACATCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGATGGGCTTCGGG CAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTACAACCTGGAGCAGTCCATT GATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGCACGAACTGGGC ATCTGA

Peptide Sequence

PEP ID	Os04t0476800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23867557:23872076:-1 gene:Os04g0476800 transcript:Os04t0476800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA5 protein (Fragment). (Os04t0476800-01)
Sequence	MSRRRDAAPTAREGERDLVVKVKFGGTLKRFTAFVNGPHFDLNLAALRSKIASAFKFNPD TEFVLTYTDEDGDVVILDDDSDLCDAAISQRLNPLRINVELKSSSDGVHQTKQQVLDSIS VMSTALEDQLAQVKLAIDEALKFVPEQVPTVLAKISHDLRSKAASSAPSLADLLDRLAKL MAPKSKMQSSSGSADGSSGSSSGRGQTLGSLNIKNDTELMAVSASNPLDMHNSGSTKSLG LKGVLLDDIKAQAEHVSGYPYYVDTLSGWVKVDNKGSTNAQSKGKSVTSSAVPQVTSIGH GAPTVHSAPASDCGEGLRSDLFWTQLGLSSESFGPNGQIGGDLNSTCPPPPLFPRYPLQS LRADKSSIKGGCSYPPCICKSSTSKPENLSHYPVQSLQADRSLKGGHYFPPCTCKSNTSK PDNLSPVGLYGPYSEGSSCNRCPYRDLSDKHESMAQHTLHRWIQCDGCGVTPIAGSRYKS NIKDDYDLCNTCFSRMGNVNEYTRIDRPSFGSRRCRDLNQNQMLFPHLRQLHDCRFIKDV TVPDGTVMAPSTPFTKIWRIHNNGSSMWPYGTCLTWVGGHLFARNSSVKLGISVDGFPID QEIDVGVDFVTPAKPGGYVSYWRLASPTGQMFGQRVWVFIQVEHPVKTSSNKQSAAINLN MPPEGSNTEWKHSVDANIQSADIVGKYSGSTITDPLAHALYHEATKPMEPELVSSAVPSV PRAFESVLVPATDLLTSSAGAEKASKPAATPGPAPQAVPLPKPVSIPASGPAPAPVSATT AAPVGAAAAPISEPTAPAAAIGMPSATARAASCLPTEPSSDHISAVEDNMLRELGQMGFG QVDLNKEIIRRNEYNLEQSIDELCGILEWDALHDELHELGI

Transcript Sequence

Transcript ID	Os04t0476800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23867557:23872076:-1 gene:Os04g0476800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TA5 protein (Fragment). (Os04t0476800-01)
Sequence	GAAGGAAACGGAATTTGCTTACGGATTAAAAGGGAGGTCTTGACTCAACCCGTCTCCTTC TCCTCCTCCCCTCCGCCTCGTCGTCTTCGTCTCACGCCACCATCGCCATCGCGGGGCTTC GTTTGGTCGGGATGTCTCGCCGCCGGGACGCTGCGCCGACGGCGCGCGAGGGCGAGAGGG ATCTCGTCGTGAAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATG GTCCGCACTTTGATCTTAATCTGGCTGCTCTTCGGTCAAAGATTGCGAGTGCTTTTAAGT TCAATCCAGATACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATAC TGGATGATGATAGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGA TTAATGTTGAGTTGAAGAGCAGCAGTGATGGGGTACATCAGACAAAACAGCAGGTATTGG ATTCCATATCTGTAATGTCCACTGCTCTGGAAGATCAATTGGCTCAGGTGAAATTAGCTA TCGATGAAGCTTTAAAATTTGTACCAGAACAAGTTCCCACTGTCCTTGCAAAAATATCAC ATGACTTGCGTTCTAAAGCTGCATCATCAGCGCCATCATTGGCTGATTTGCTGGACCGGC TTGCTAAACTGATGGCACCAAAGAGCAAAATGCAGTCTTCCAGTGGTTCTGCTGATGGTT CATCTGGCTCCTCTAGTGGTAGGGGACAAACTTTGGGAAGTTTGAATATTAAAAATGACA CTGAGCTCATGGCTGTTTCAGCTTCGAACCCTCTGGATATGCATAACTCTGGATCAACTA AATCACTTGGTCTTAAGGGTGTGCTTCTTGATGACATCAAAGCTCAAGCTGAACATGTAT CGGGATATCCTTATTATGTGGATACCCTTTCAGGCTGGGTAAAAGTTGATAACAAGGGAA GTACCAATGCCCAAAGTAAGGGCAAGTCTGTTACATCCTCTGCTGTGCCACAAGTTACTA GCATTGGTCATGGTGCACCTACTGTTCATTCTGCTCCTGCTTCAGATTGCGGTGAAGGGT TAAGAAGTGATCTTTTCTGGACACAACTAGGCCTTTCTTCTGAGTCCTTTGGGCCTAATG GCCAGATTGGTGGTGATTTGAACTCGACATGCCCTCCTCCACCACTGTTTCCCCGTTACC CACTTCAGTCTCTCCGAGCTGATAAAAGCAGTATCAAGGGTGGTTGCTCTTACCCTCCGT GCATCTGCAAAAGTAGCACATCTAAGCCTGAGAATCTCTCCCATTACCCAGTTCAGTCCC TCCAAGCTGACAGAAGCCTAAAGGGTGGTCACTATTTCCCTCCATGCACCTGCAAAAGTA ACACATCCAAGCCAGATAATCTCTCACCAGTCGGTCTTTATGGACCTTATTCTGAAGGCA GCAGCTGTAATAGGTGCCCATACAGGGATCTAAGTGATAAGCACGAGAGCATGGCGCAGC ACACACTGCATAGATGGATACAGTGCGATGGCTGTGGGGTCACTCCTATCGCTGGTTCTC GCTACAAGTCAAATATTAAAGATGATTATGATTTATGCAATACCTGTTTTTCTCGAATGG GCAATGTGAATGAATATACCAGAATAGACAGACCATCTTTTGGGAGTAGACGATGTAGAG ACCTCAATCAGAACCAGATGCTCTTTCCACATCTTCGACAGCTACATGATTGCCGCTTCA TTAAGGATGTTACTGTCCCTGATGGAACAGTAATGGCACCATCAACCCCATTTACAAAGA TTTGGCGCATACATAACAATGGATCTTCCATGTGGCCATATGGGACATGTCTTACCTGGG TTGGTGGACATCTATTTGCACGCAACAGCTCAGTTAAATTAGGGATCTCGGTGGATGGTT TCCCTATTGATCAAGAGATCGATGTTGGTGTTGATTTTGTCACACCTGCAAAGCCTGGTG GGTACGTGTCGTACTGGAGATTGGCATCACCCACTGGCCAGATGTTTGGTCAGCGAGTTT GGGTTTTTATTCAGGTGGAGCACCCGGTCAAAACCAGTAGCAACAAGCAGAGTGCTGCTA TAAACTTGAACATGCCCCCAGAAGGAAGCAACACAGAATGGAAGCATTCTGTTGATGCAA ATATTCAGTCTGCAGATATTGTGGGTAAATACTCTGGAAGCACCATAACTGATCCTCTTG CACATGCACTATACCATGAAGCCACCAAACCGATGGAACCTGAGCTTGTTTCAAGTGCCG TACCTTCTGTACCTAGAGCATTTGAATCAGTGCTAGTGCCAGCTACTGATCTCCTCACTT CATCTGCTGGAGCTGAAAAGGCTTCGAAGCCTGCTGCCACGCCTGGACCTGCACCTCAAG CCGTTCCCCTGCCAAAACCTGTTAGCATTCCTGCATCTGGACCTGCGCCTGCTCCTGTTA GTGCGACTACCGCTGCACCTGTCGGAGCTGCTGCTGCTCCTATCAGTGAGCCCACTGCAC CTGCTGCTGCCATTGGAATGCCCTCTGCAACTGCTCGCGCTGCTTCTTGCCTGCCTACCG AGCCTTCATCTGATCACATCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGA TGGGCTTCGGGCAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTACAACCTGG AGCAGTCCATTGATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGC ACGAACTGGGCATCTGATCAGAACGGAGATGAACAAGGCGCTCACCAAGGACGGCGAGGA AGCATGTGGCCGTGAATCTTTTTTGCCCCTCCTAGAAGGGCCAGTGATGACCTCGTCGTG TTCAGCTATTGAGCACCTTGCAGTATCCAAGATATAGACCGTAGTATATTTATAAATAGC TTACCTAGTTAAAAGCGGCGTTCGTGCTGCTGTGCTACCCCTACTCGCCAGCAACCTTAG AGGGTCTGGTGTAGTGCCAGTAGTGGTGTTTAAAGACTTCTAATCATCGGTGTGTAATCG AAATAAGTACCGTACCTACTAGTTGTTTATTATGCTATATGATGTATTAAACTTGTGTTG C