Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0476600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23859323:23863234:1 gene:Os04g0476600 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0476600-01)
Sequence	AATTGTTTTGAGGTTGTTATGCTGTACAAAATAATTCACTACCCTGAGTTGTCGTCAAGT GAAGGAATGTCACATCTGACTGTATCATACAATGTAGAGTTCCTTCAGAGTACCATGATG AAAAGTATGATTGAGGGAAGTGTTCGGGATGGACTGAAAGAAAATTTTGAAAGTTACGCA GAAATTTTGTCTCGGCATGTAAAAATTGCTGATTCTGCTGGGATGGATAAAGAGCGATTA TTGGCACCGCTCCAGACTGATCATCAGTCAGATATCAGACTTGCTTACAAGTATTTTTGC AATTTCACAGTCATCTCTACAGTGATAATGGCACTGTATGTTCTTGTACACATCTTTCTG TCAAGACCAGGCCCTCTTATGGGTCTTGAGTTCAAAGGTCTTGATTTACCTGACACGTTT GGAGAGCTGATCATATCTGGCATACTAGTTCTTCAGCTAGAACGTTTACTGAGTATGATA TCTCGTTTTGTAGAGGTAAGGGTACAGCGAGGAAGTGATCACGGGATTAAAGCAAATGGA GATGGTTGGTTGTTAACTGTAGCTCTGCTAGAGGCCACAAGCTTGCCGCCTGTCTCTAGC GGTTCCGTAGATCCTTATGTTGTGTTCAGCTGTAACGGCATAACACGAACAAGCTCTGTG CAACTTCAGACTCATGACCCTCAATGGAACGAGATAATGGAGTTTGATGCCATGGAAGAA CCACCTGCTACGTTGGATGTTGAGGTTTTCAATTTTGATGGACCATTTGATCTGGCAGTT TCTCTGGGACATGCTGAAATTAACTTCCTTAAACACACGTCAGCAGAACTAGCAGATATA TGGGTGCCACTGGAAGGTAAATTAGCTCAGACTTGTCAGAGTAGGTTACATTTGAGAATA TTTCTGGAGAACACAAAAGGACCTGAGACATCAATGAGAGAGTACTTAAGTAAGATGGAG AAGGAAGTTGGTAAGAAGTTACATGTTCAGTCACCTCACAGAAATGCAACGTTCCAGAAG CTTTTTGGTTTACCACACGAAGAATTCCTTATAGCAGTTTATGCGTGCTCCTTGAAACGG AAGTTGCCGTTGCAGGGAAGACTGTTTCTGTCAGCCAGAATAGTTGGTTTCTATGCCAAT CTGTTTGGACATAAAACGAAATTCTTCTTTCTGTGGGAAGATGTCGAGGAAATCGAAGAG TTAACTCCATCTTTCACAACAGTAGGTACTCCATCTTTGTTGTTTGTCTTGAAGAGCGGC CGGGGACTCGATGCCAAGAATGGTGCAAAGTCCCAAGATAAGGAAGGCAGGTTGAAGTTT CAGTTCCATTCGTTTGCTTCATTTAGCAAGGCTAGCAGGACAATAATTGGACTATGGAAA ACCAAATCATCAGCTATTGAACAGAGGGCTAAACTAGAAGAAGATCAAGAAGATGAAAAC TATGTCGATCTTAATGATGTTCAATCTGTATTGAGCATTGGAGATGTGCCACTGTCAAAG GAGTATACTTTGGAACTGCCTATCGATGCGGATCTGCTGATGGGGGTGTTCGACGGGGGC CCCCTGGAGGCGAAGGCGATGAGCAGGGCGGGTTGCCTCGACTACGCCGCCACCCCGTGG CAGGACGCCCGGCCCGGCGTCCTGGAGCGGCACGCCAGCTACAAGTTCAACCGCTACATG TCCATCTTCGGCGGCGAGGTCGTCAGCACCCAGCTCAGGCTCCCCTCCGACGACGGCGAC GGCTGGACCGTCTACGACGTCATCACGCTGCGCAACGTCCCCTTCGGCGACTTCTTCCGG TTGCATTTGAGGCACAACATATGGAGCGTGGAGGCCGCGTCGTCGGAGGCGGCGGCGAGC AGCGGGAGCCGGTGCGAGATACTGGTGGGGATCGAGTGGGTGAAGAGGAGCAAGTTCCAG AAGAGGATCGCGAGGAACATCTGCGAGAAGCTGGCGCACAGGGCGAAGGAGGTGCTCGAG GCGGCCGCCAGGGAGATCGCCCCGGCCTTGTCGGGCTAG

Peptide Sequence

PEP ID	Os04t0476600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23859323:23863234:1 gene:Os04g0476600 transcript:Os04t0476600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0476600-01)
Sequence	NCFEVVMLYKIIHYPELSSSEGMSHLTVSYNVEFLQSTMMKSMIEGSVRDGLKENFESYA EILSRHVKIADSAGMDKERLLAPLQTDHQSDIRLAYKYFCNFTVISTVIMALYVLVHIFL SRPGPLMGLEFKGLDLPDTFGELIISGILVLQLERLLSMISRFVEVRVQRGSDHGIKANG DGWLLTVALLEATSLPPVSSGSVDPYVVFSCNGITRTSSVQLQTHDPQWNEIMEFDAMEE PPATLDVEVFNFDGPFDLAVSLGHAEINFLKHTSAELADIWVPLEGKLAQTCQSRLHLRI FLENTKGPETSMREYLSKMEKEVGKKLHVQSPHRNATFQKLFGLPHEEFLIAVYACSLKR KLPLQGRLFLSARIVGFYANLFGHKTKFFFLWEDVEEIEELTPSFTTVGTPSLLFVLKSG RGLDAKNGAKSQDKEGRLKFQFHSFASFSKASRTIIGLWKTKSSAIEQRAKLEEDQEDEN YVDLNDVQSVLSIGDVPLSKEYTLELPIDADLLMGVFDGGPLEAKAMSRAGCLDYAATPW QDARPGVLERHASYKFNRYMSIFGGEVVSTQLRLPSDDGDGWTVYDVITLRNVPFGDFFR LHLRHNIWSVEAASSEAAASSGSRCEILVGIEWVKRSKFQKRIARNICEKLAHRAKEVLE AAAREIAPALSG

Transcript Sequence

Transcript ID	Os04t0476600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23859323:23863234:1 gene:Os04g0476600 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0476600-01)
Sequence	AAATTGTTTTGAGGTTGTTATGCTGTACAAAATAATTCACTACCCTGAGTTGTCGTCAAG TGAAGGAATGTCACATCTGACTGTATCATACAATGTAGAGTTCCTTCAGAGTACCATGAT GAAAAGTATGATTGAGGGAAGTGTTCGGGATGGACTGAAAGAAAATTTTGAAAGTTACGC AGAAATTTTGTCTCGGCATGTAAAAATTGCTGATTCTGCTGGGATGGATAAAGAGCGATT ATTGGCACCGCTCCAGACTGATCATCAGTCAGATATCAGACTTGCTTACAAGTATTTTTG CAATTTCACAGTCATCTCTACAGTGATAATGGCACTGTATGTTCTTGTACACATCTTTCT GTCAAGACCAGGCCCTCTTATGGGTCTTGAGTTCAAAGGTCTTGATTTACCTGACACGTT TGGAGAGCTGATCATATCTGGCATACTAGTTCTTCAGCTAGAACGTTTACTGAGTATGAT ATCTCGTTTTGTAGAGGTAAGGGTACAGCGAGGAAGTGATCACGGGATTAAAGCAAATGG AGATGGTTGGTTGTTAACTGTAGCTCTGCTAGAGGCCACAAGCTTGCCGCCTGTCTCTAG CGGTTCCGTAGATCCTTATGTTGTGTTCAGCTGTAACGGCATAACACGAACAAGCTCTGT GCAACTTCAGACTCATGACCCTCAATGGAACGAGATAATGGAGTTTGATGCCATGGAAGA ACCACCTGCTACGTTGGATGTTGAGGTTTTCAATTTTGATGGACCATTTGATCTGGCAGT TTCTCTGGGACATGCTGAAATTAACTTCCTTAAACACACGTCAGCAGAACTAGCAGATAT ATGGGTGCCACTGGAAGGTAAATTAGCTCAGACTTGTCAGAGTAGGTTACATTTGAGAAT ATTTCTGGAGAACACAAAAGGACCTGAGACATCAATGAGAGAGTACTTAAGTAAGATGGA GAAGGAAGTTGGTAAGAAGTTACATGTTCAGTCACCTCACAGAAATGCAACGTTCCAGAA GCTTTTTGGTTTACCACACGAAGAATTCCTTATAGCAGTTTATGCGTGCTCCTTGAAACG GAAGTTGCCGTTGCAGGGAAGACTGTTTCTGTCAGCCAGAATAGTTGGTTTCTATGCCAA TCTGTTTGGACATAAAACGAAATTCTTCTTTCTGTGGGAAGATGTCGAGGAAATCGAAGA GTTAACTCCATCTTTCACAACAGTAGGTACTCCATCTTTGTTGTTTGTCTTGAAGAGCGG CCGGGGACTCGATGCCAAGAATGGTGCAAAGTCCCAAGATAAGGAAGGCAGGTTGAAGTT TCAGTTCCATTCGTTTGCTTCATTTAGCAAGGCTAGCAGGACAATAATTGGACTATGGAA AACCAAATCATCAGCTATTGAACAGAGGGCTAAACTAGAAGAAGATCAAGAAGATGAAAA CTATGTCGATCTTAATGATGTTCAATCTGTATTGAGCATTGGAGATGTGCCACTGTCAAA GGAGTATACTTTGGAACTGCCTATCGATGCGGATCTGCTGATGGGGGTGTTCGACGGGGG CCCCCTGGAGGCGAAGGCGATGAGCAGGGCGGGTTGCCTCGACTACGCCGCCACCCCGTG GCAGGACGCCCGGCCCGGCGTCCTGGAGCGGCACGCCAGCTACAAGTTCAACCGCTACAT GTCCATCTTCGGCGGCGAGGTCGTCAGCACCCAGCTCAGGCTCCCCTCCGACGACGGCGA CGGCTGGACCGTCTACGACGTCATCACGCTGCGCAACGTCCCCTTCGGCGACTTCTTCCG GTTGCATTTGAGGCACAACATATGGAGCGTGGAGGCCGCGTCGTCGGAGGCGGCGGCGAG CAGCGGGAGCCGGTGCGAGATACTGGTGGGGATCGAGTGGGTGAAGAGGAGCAAGTTCCA GAAGAGGATCGCGAGGAACATCTGCGAGAAGCTGGCGCACAGGGCGAAGGAGGTGCTCGA GGCGGCCGCCAGGGAGATCGCCCCGGCCTTGTCGGGCTAGCGAGAAGCTGGAGGAGACGG CTGTTTTTTCTTTTTCTTCCAGCAAGGCCGCAACGGAGAAGATCTCTGCAGAGGAGCAGA GTGCACGACTGAACTGTGTCGGCTTTTGCCTTGGCTGTAGCGTAGTAGTATCTCCAAAAC AGAACGAAACAAATAGGAATACGGAGATGTATACCAACTACAGTATATACGATATCTTCA AGAAGTACACATGATCCC