Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0476500-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:23849418:23853864:1 gene:Os04g0476500 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os04t0476500-01);MULE transposase, conserved domain domain containing protein. (Os04t0476500-02)
Sequence	ATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGAC ACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCT CAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGC TACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATAC CGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCT CGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACA ACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCT GAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGGGAGCACCGC CCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCC AACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAA GCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTC TTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGAT GAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCAC TTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTG GTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTT GGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAAT GATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCT GAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCT GAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTC TTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTAT AACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCA GCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTG GAGGCCTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAA TTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTT CAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTAT ACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGC ACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAG AGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGC AGGTCCTTCCAGTTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAA CTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGC CCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGC ACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAG TACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTG TCGGTCATGAAAGAAGCCAAAGAGAAGGTACGGAAGTTCGAGGAATCTCGAAAAGATAGA AGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCC AATGAGGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGGCGACA GTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCT ACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTT TTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCA CCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAG GGGAACAAATGA

Peptide Sequence

PEP ID	Os04t0476500-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:23849418:23853864:1 gene:Os04g0476500 transcript:Os04t0476500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os04t0476500-01);MULE transposase, conserved domain domain containing protein. (Os04t0476500-02)
Sequence	MDTHHSDQYAKSSLQLQFRDTSVSFENNNSVLDKHDITSPQVGMTFETADLAYRFYLEYG YRAGFGVSKRTSHSVDGVKYRATFVCYKGGIARIKPGLKARRRLVAKTGCKAMMVVKYNT TENQWEVVFVELEHNHPCNPEMVRFMMCFKDLPDWQREHRPFNAKTRLNPKIHSGRGRPP NQNKDFMVKKTFSQSNYSIEAAGKAGKLRFAEGDVEALLVFFDKMQAQNSNFFYNWDMDD EGRLKNVCWVDARSRAAYQHFCDVVCFDTVYLTYQFVIPLVAFLGINHHGQFVLLGCGLL GDESPETFSWLFKKWLKCMNDKSPEAIITTHSRPVVKAVAEVFPNTRHRYNLWHIMKELP EMSGRVEDKEAISLRMKKVVFDTITSTDFEREWVEMVNQYNLHDNHWLTTLFEERAKWVP AYVKDTFWAGISTVRRSERLEAFFDGYITPETTIKTFIEQFDTAMKLRSDREAYDDFRSF QQRPQVLSGLLFEEQFANVYTINMFQKFQDHLKQLMNVTCTEVSRNGSIVTYTVTVIGKE RKYDYKVMYNSAEKEVWCICRSFQFKGILCSHALAVLRQELVMLIPYKYILDRWRKDYKC PEESKETPISPKAIKATGKGTKPENAREDKVDNLYKHGHQYFADIVEMGATDPDAMEYVL SVMKEAKEKVRKFEESRKDRRPGDSPVSTGKRNGKSSRPSNEDGGNGISDSTPATTTVAT VAVATSTTMQATPTMVAIAPTSATVPAGMFLVPMHPHPMVFPPFTPAVPPVVAPAVPPPA PAANVGDVASNSTRKRKKRKGNK

Transcript Sequence

Transcript ID	Os04t0476500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23849418:23853864:1 gene:Os04g0476500 gene_biotype:protein_coding transcript_biotype:protein_coding description:MULE transposase, conserved domain domain containing protein. (Os04t0476500-01);MULE transposase, conserved domain domain containing protein. (Os04t0476500-02)
Sequence	AGTTAACCGGCGCGGCGTCCGGCGACCGTACACTCGGCGGAGGCCGCAGAGCGGCAGCGG CAGGCGGCGGTGCCGCCGAGGGCAGTCGGCTCGGCTCCCGCGGCAAAGCGGGAACGGGAG AGAGAGCAGGGCGGCACACGCGCGCGCTGAGGCTGCGCGCGGTGGGCGCGGCGTCCGGCG ATGCCCGGGCAAGAGCTATAGGAAGGCGAAGTCGTGGGCTACAGCCCCAGTCCCCAGTGC TAAGGCAGTTTCTGATTACCCAAGTGTAGATGTGATGGACACCCATCACAGCGATCAATA TGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAA TTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGC CGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAA GAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGG CGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGG TTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTT TGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTT TAAAGATCTCCCTGACTGGCAGAGGGAGCACCGCCCATTCAATGCCAAGACTAGATTGAA TCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAA AAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAG ATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAA TTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTG GGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATAC TGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCA TGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTC TTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTAC CACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAG ATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAA GGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTT TGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTAC AACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGC TGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTGATGGATACATTAC ACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTC TGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGG TCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCA AGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAAT AGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTA TAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAGTTTAAAGGTATTTT GTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATA TATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCAT CTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGA TAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGG AGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAGAA GGTACGGAAGTTCGAGGAATCTCGAAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTAC TGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGAGGATGGGGGCAATGGCATATC AGATTCAACACCTGCGACTACAACAGTGGCGACAGTCGCGGTGGCCACATCTACAACAAT GCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAAT GTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACC ACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGC TTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGATGTTCCTAATACTG ATTATGCCTAACTCAAATTTAGTCCTACAAGCTGCACCAGGCCCTCCTGTCCATGTGTAA TAATGGTTTATCATCGTCTCCTGCTGCAGGATGATCTGCCCCTCTGAATGCTTTCTGTGA ATTATCCCCCTTGACTTGGAACTGTCCGTGCAGCTTTGGACTGTCTACTGTAAATTGATA TGGAAAGTAATGTATTATGTATGTAGTGCAGCTTAGGAATGTTAGTCTCTGTTTCTGCTC ATGTGGATTGCGACCTGGAGCAGCGCAGTACCAAGACTACCAGTAGCGTAGCAGTACCCC TTGCTGGTTGGTAGAGTACCATTTTCTTTCCTTTCTGGAGTTTGTCACTTTATGTAATGA TGTAATCACACTGAACTTTATTGCCAACCACTAATGCTTAGTTTCATC