Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0475500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23790794:23792871:-1 gene:Os04g0475500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:virescent 4 description:Pentatricopeptide repeat (PPR) protein, Early chloroplast development under cold stress (Os04t0475500-01)
Sequence	ATGCGGGACAGGAGCAAGAACCGGAAGCCGACGCAGCGGGGTCGCTACCTCAGCACCGAG GCCATCCAGGCCGTCCAGTCCCTCAAGCGCGCCGCCCTCCGGGGCTCCCCCTCCGCCGCC GCCGCCGCCGTCCCCGTGGAGCCCAAGCTCCGGCGGCTGCTCAAGGCCGACATGGTCGCC GTCTTCCGCGAGCTCGCCGCGCAGGGCGAGGCCCTCCTCGCTCTCCAGGTCTTTGAGGAG ATCCGGAAGGAGCATTGGTACAAGCCTAAGTTGCTGTTGTACGTCGATATCGTGACAGTG CTGGCAAGCAAAGGGTTGCGGTCTGAGGTTGACAAGGTTTGTTCATATCTGAAGAGGGAG CAGTTGGAACCTGACACTGAAGGCTTCAATGTGCTTCTGAAGGCACTGCTGGATGCCGAG TTTACACAATTAACCATGGACTGCTTCCGTCTAATGAAACTATGGGACAGTGATCCCGAC AGGATAACATACAGAACATTGATTAAAGGCCTTGAGTCCCTAGGAGAGATGGGTCTATCT GCTGATATAAAGTTGGAGGCGCAGAACGATTACGGTGACTTGGACTTTCTTGATGAAGAG GAGATGATCGATACTCTGGAACAAAAGAGCATTTGGCGAGGTTCATCGCTCATCGCGGAG AATAGGAGGGCACGAATTAGCTCTTAA

Peptide Sequence

PEP ID	Os04t0475500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23790794:23792871:-1 gene:Os04g0475500 transcript:Os04t0475500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:virescent 4 description:Pentatricopeptide repeat (PPR) protein, Early chloroplast development under cold stress (Os04t0475500-01)
Sequence	MRDRSKNRKPTQRGRYLSTEAIQAVQSLKRAALRGSPSAAAAAVPVEPKLRRLLKADMVA VFRELAAQGEALLALQVFEEIRKEHWYKPKLLLYVDIVTVLASKGLRSEVDKVCSYLKRE QLEPDTEGFNVLLKALLDAEFTQLTMDCFRLMKLWDSDPDRITYRTLIKGLESLGEMGLS ADIKLEAQNDYGDLDFLDEEEMIDTLEQKSIWRGSSLIAENRRARISS

Transcript Sequence

Transcript ID	Os04t0475500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23790794:23792871:-1 gene:Os04g0475500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:virescent 4 description:Pentatricopeptide repeat (PPR) protein, Early chloroplast development under cold stress (Os04t0475500-01)
Sequence	GCGGTCGTCCGTTCGTCACTCCGCCTTGCCCCTCCCCGCGCCGCCGCTCGTCGGAGAGCC GCCGCCGTCATCACGATGCGGGACAGGAGCAAGAACCGGAAGCCGACGCAGCGGGGTCGC TACCTCAGCACCGAGGCCATCCAGGCCGTCCAGTCCCTCAAGCGCGCCGCCCTCCGGGGC TCCCCCTCCGCCGCCGCCGCCGCCGTCCCCGTGGAGCCCAAGCTCCGGCGGCTGCTCAAG GCCGACATGGTCGCCGTCTTCCGCGAGCTCGCCGCGCAGGGCGAGGCCCTCCTCGCTCTC CAGGTCTTTGAGGAGATCCGGAAGGAGCATTGGTACAAGCCTAAGTTGCTGTTGTACGTC GATATCGTGACAGTGCTGGCAAGCAAAGGGTTGCGGTCTGAGGTTGACAAGGTTTGTTCA TATCTGAAGAGGGAGCAGTTGGAACCTGACACTGAAGGCTTCAATGTGCTTCTGAAGGCA CTGCTGGATGCCGAGTTTACACAATTAACCATGGACTGCTTCCGTCTAATGAAACTATGG GACAGTGATCCCGACAGGATAACATACAGAACATTGATTAAAGGCCTTGAGTCCCTAGGA GAGATGGGTCTATCTGCTGATATAAAGTTGGAGGCGCAGAACGATTACGGTGACTTGGAC TTTCTTGATGAAGAGGAGATGATCGATACTCTGGAACAAAAGAGCATTTGGCGAGGTTCA TCGCTCATCGCGGAGAATAGGAGGGCACGAATTAGCTCTTAACAGGATGTGTCACTGGTA GTGATCTTACCACTCTATCTAATCTGCATTTCAGTATTTGTGAAACTTAGCACGGTTGCG TACATGGTTGTTTGACTGTTTGACAAGGAGATCATTGTGAAATACCAGGAAGCTTTTAGT ATAGATGAGAAGAATATGATAGACATTGCACCCAGCAGAATTTGATGACTGGTGACGACT TATACTCACCTGATCATTCTAATGTAGAAGAAAGCATATCTGAGATCTTTTTTATGTTCA TGCTTTTTTCCATAGATTTTTTCCCCCTTAAAAAGTTCTGTGTATAATCATGCATTGCTG CCTTGTACTTGAACTTGAGAAATCTAGTAATATGATACAATTCC