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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0474800-03
CDS Infomation

cds chromosome:IRGSP-1.0:4:23747658:23749028:-1 gene:Os04g0474800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 12 description:Similar to OSIGBa0135C13.7 protein. (Os04t0474800-01);Similar to Isoform 2 of Beta-glucosidase 12. (Os04t0474800-02);Similar to OSIGBa0135C13.7 protein. (Os04t0474800-03)
Sequence

GATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGA
GGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAA
GAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCG
AACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCT
CGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACCT
TGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGCTACTTTATGTTAAGGAGAACTAT
GGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTTA
CCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTT
TCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTG
CTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGAT
TACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTC
CTGAAATGA

Peptide Sequence

PEP ID

Os04t0474800-03
PEP Infomation

pep chromosome:IRGSP-1.0:4:23747658:23749028:-1 gene:Os04g0474800 transcript:Os04t0474800-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 12 description:Similar to OSIGBa0135C13.7 protein. (Os04t0474800-01);Similar to Isoform 2 of Beta-glucosidase 12. (Os04t0474800-02);Similar to OSIGBa0135C13.7 protein. (Os04t0474800-03)
Sequence

DAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTA
NYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENY
GNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSL
LDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK

Transcript Sequence

Transcript ID

Os04t0474800-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:23747658:23749028:-1 gene:Os04g0474800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 12 description:Similar to OSIGBa0135C13.7 protein. (Os04t0474800-01);Similar to Isoform 2 of Beta-glucosidase 12. (Os04t0474800-02);Similar to OSIGBa0135C13.7 protein. (Os04t0474800-03)
Sequence

TGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAG
AGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAA
AGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGC
GAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTC
TCGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACC
TTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGCTACTTTATGTTAAGGAGAACTA
TGGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTT
ACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCT
TTCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCT
GCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGA
TTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCT
CCTGAAATGATAAAAAAGCACCATTGCACTCATTGCTTTTCTCATTGAATAATAAAAGAG
TATATGTTTTGCGTG