Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0474500-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:23728128:23733575:-1 gene:Os04g0474500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 10 description:Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-01);Similar to OSIGBa0135C13.5 protein. (Os04t0474500-02);Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-03)
Sequence	ATGGCGGTTGCAGGTGCAATGGTGATGTCAGGTGGCGTGCTCCTTCTCCTCTTGGCTTTC ACCTGCGCCGCCTACAATGACGCCGGCGAGCTGCCGCCGATCAGCCGGAGAAGCTTCCCC AAGGGGTTCATCTTTGGGACGTCCTCGTCGTCATATCAGTTTGAGGGTGCCGCGGCGAAG GGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTATCCAGACAAAATCACC GACAAGAGCAACGGGGATGGTGCTTGCAATAGCTACCATCTCTACAAGGAAGATGTGCGC ATTATGAAGGAGATGGGAATGGATGCATACAGGTTTTCCATCTCGTGGTCAAGAATTCTT CCAAATGGAAGTCTCAGCGGTGGAGTCAACAGAGAAGGCATCAACTACTACAACAATTTG ATCAATGAACTATTATCAAAAGAGGTCCAACCATTTGCTACCCTATTCCATTTTGATACA CCTCAGGCACTGGAAGATAAATATAAAGGATTTCTTAGCCCTAATATCATAAATGACTAT AAGGACTATGCTGAAATATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACC TTCAATGAGCCTTGGAACTTCTGCTCTATGGGCTATGCATCTGGCACCATGGCACCAGGC CGGTGTTCATCCTGGGAGAAGGGAAAATGCAGAGTTGGAGATTCAGGAAGGGAGCCTTAC ACTGCATGCCATCACCAACTACTTGCTCATGCAGAAACTGTTCGGCTTTATAAAGAGAAA TATCAGTTCACTGAAGAAGCTATCAGGCAGTCGCCGTTCATCCGTGATAATAATTTAAAT CGAAGATCTGCAAAGCTTTACAAAAGGGGAGGATTGGAATAA

Peptide Sequence

PEP ID	Os04t0474500-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:23728128:23733575:-1 gene:Os04g0474500 transcript:Os04t0474500-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 10 description:Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-01);Similar to OSIGBa0135C13.5 protein. (Os04t0474500-02);Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-03)
Sequence	MAVAGAMVMSGGVLLLLLAFTCAAYNDAGELPPISRRSFPKGFIFGTSSSSYQFEGAAAK GGRGPSIWDTFTHQYPDKITDKSNGDGACNSYHLYKEDVRIMKEMGMDAYRFSISWSRIL PNGSLSGGVNREGINYYNNLINELLSKEVQPFATLFHFDTPQALEDKYKGFLSPNIINDY KDYAEICFKEFGDRVKHWITFNEPWNFCSMGYASGTMAPGRCSSWEKGKCRVGDSGREPY TACHHQLLAHAETVRLYKEKYQFTEEAIRQSPFIRDNNLNRRSAKLYKRGGLE

Transcript Sequence

Transcript ID	Os04t0474500-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23728128:23733575:-1 gene:Os04g0474500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 10 description:Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-01);Similar to OSIGBa0135C13.5 protein. (Os04t0474500-02);Similar to Cyanogenic beta-glucosidase precursor (EC 3.2.1.21) (Linamarase) (Fragment). (Os04t0474500-03)
Sequence	ATGTTGGGCACCGTTTGTGTTCATCAGCCCATCACTCTTTTCTGTCTATGTAGGTCATGG CGGTTGCAGGTGCAATGGTGATGTCAGGTGGCGTGCTCCTTCTCCTCTTGGCTTTCACCT GCGCCGCCTACAATGACGCCGGCGAGCTGCCGCCGATCAGCCGGAGAAGCTTCCCCAAGG GGTTCATCTTTGGGACGTCCTCGTCGTCATATCAGTTTGAGGGTGCCGCGGCGAAGGGTG GCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTATCCAGACAAAATCACCGACA AGAGCAACGGGGATGGTGCTTGCAATAGCTACCATCTCTACAAGGAAGATGTGCGCATTA TGAAGGAGATGGGAATGGATGCATACAGGTTTTCCATCTCGTGGTCAAGAATTCTTCCAA ATGGAAGTCTCAGCGGTGGAGTCAACAGAGAAGGCATCAACTACTACAACAATTTGATCA ATGAACTATTATCAAAAGAGGTCCAACCATTTGCTACCCTATTCCATTTTGATACACCTC AGGCACTGGAAGATAAATATAAAGGATTTCTTAGCCCTAATATCATAAATGACTATAAGG ACTATGCTGAAATATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCA ATGAGCCTTGGAACTTCTGCTCTATGGGCTATGCATCTGGCACCATGGCACCAGGCCGGT GTTCATCCTGGGAGAAGGGAAAATGCAGAGTTGGAGATTCAGGAAGGGAGCCTTACACTG CATGCCATCACCAACTACTTGCTCATGCAGAAACTGTTCGGCTTTATAAAGAGAAATATC AGTTCACTGAAGAAGCTATCAGGCAGTCGCCGTTCATCCGTGATAATAATTTAAATCGAA GATCTGCAAAGCTTTACAAAAGGGGAGGATTGGAATAATTTTGAACTCAGAGTGGTTTGT TCCTTTCTCCCAATCCAAATCCAGCAATGATGCTGCAAGACGTGTTCTAGACTTCATGCT TGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGT TGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGAAATGGTCAAGGGTGCATTCGA TTTTATTGGACTCAACTACTACGCTTCAAGCTATGCTGATAATGATCCTCCATCATATGG CCATAACAACAGCTATAATACTGATTCCCATGCTAAGATTACTGGTAGTCGAAACGGGAT TCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTTACATCTACCCTGAAGGGTTGCGTGA ATTGTTGCTTCATATTAAGGAAAACTATGGCAATCCTACCATCTACATCACTGAAAATGG TGTTGATGAAATCAATAATAAGACCATGCGACTCAAGGAGGCCCTGAAGGATGATATCAG GATTGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAA TGTGAAGGGGTACTTCGCATGGTCTCTGCTTGACAACTTTGAGTGGTCAGAGGGCTACAC AGTTCGGTTTGGGATAAACTTTGTGGATTACGATAACGGAATGAAGAGATACCCCAAGAA CTCAGCCCGTTGGTTCAAGAAGTTCCTCCGGAAATGAAACAGAGATGGAAACAAAAGGTT GAAAATAGTTGCGCACACTCCCTTTTTCTCATTGAACATCAAAATAGTATATAAGCTTTA TGAGTTAAGTGCCATAAATGAAATTAGTTCGTAAAT