Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0472900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23640853:23643594:1 gene:Os04g0472900 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0472900-01)
Sequence	ATGGCTTCCCTTGCCGGTGACGGGAAAAGCCGACCGGTGAACCGCCCTGACGGCGAGCCG GAGACGACGGTGAGCCGGGTCATGGCGTGTCCGTACGTGTTCCGTGCACAGGCGCCGCCG GCGATGGCCAAGGAGGCAATGGCGACACCGACACGGCCGCAGGTCAGGGAGACGTGGCCG GCGGGTGGCGGCGGCGGCGGCGGTGGTTGGATGGGCGTTGGCTCCGGCGAGAGGGTGGCG AGCGCGTACGACCTCGTGGAGCAGATGCACTACCTGTACGTGCGCGTCGTCAGGGCGCGC GGGCTCACGGCGGCGGCGAGCACGGTCGCCGGCGGCGGCGGGTGCAACCCGTACGTGGAG GTGCGGCTCGGGAACTACCGGGGCACAACGCGGCACCACGAGCGGAAGGCGGCGCCGGAG TGGAACCAGGTGTTCGCCTTCTCGCGGGAGCGCGTCCAGGCCTCGGTGCTCGAGGTGTTC GTCAGGGACAAGGACGCCGTGGCGGCGGTGGCGCGAGACGGCTACGTTGGAAGGGTCGCG TTCGATGTCGGCGAGGCGCCCGTGCGCGTGCCGCCGGACAGCCCGCTCGCGCCGCAGTGG TACCGCCTCGAGGACGTCGGCGGCGGAGGCGGCAGGGCGGTGCAGGGAGAGGTCATGCTC GCGGTGTGGGTCGGCACGCAGGCCGACGAGGCGTTCGCGGACGCGTGGCACGCCGGCGCG GCGTCGGTGCGCGGAGGCGGCGACGGCGTGGCGGCCGTGCAGAGCACGCGGTCCAAGGTG TACGTGACGCCGAAGCTGTGGTACCTCCGGATAAGCGTGCTCGAGGCGCAGGACGTCGTC CCGGGCGCCGTCGCCGGCGCAGGCGGCGACAAGGGACGGCACGGCGAGGCCTTCGTCGTC GTCAAGGTGCAAGTCGGCGGCGTGACGCTCCGGACCAAGCCGTGCTGCCGCCCGACGAGC CCATCGTGGAACGAGGAGCTGGTGTTCGTCGTGGCGGAGCCGTTCGACGAGCCGGCGGTG CTCGTCATCGAGGCCCGGGCGGCGCACCCGGGCAAGGACGAGATCGTCAGCCGCGCCGTG CTGCCGCTCACCCTCTTCGAGAGGCGCCTCGACCGGCGCGGCGCGGCCGCGGCCACGCAC ACGCAGTCGCAGTGGTTCAGCCTGGAGCCGTTCGTGCACCGGCCGCGACACTCGCCGGAG GAGCCCGCCTTCGCCGGCCGCGTGCACCTCCGGGCGTGCCTCGACGGCGCCTACCACGTC ATGGACGAGCCCGCCATGTACGCCAGCGACACGCGCCCCACGGCGAGGCAGCTGTGGCGC CCGCCCATCGGCGTGCTCGAGGTCGGCGTCCTCGGCGCGCAGGGCCTCCCCCCGATGAAG ACCGCCGCCGACGGCGGCCGGGGCACCACCGACGCGTACTGCGTCGCCAAGTACGGCCAC AAGTGGGTGCGCACCCGCACCGTCGTCGACTCCTCCACCCCGCGGTGGAACGAGCAGTAC ACCTGGGAGGTCTACGACCCGTGCACGGTGCTCACGCTCGCCGTGTTCGACAACTGCAAC CTCGGCAATGGCGGCGGCGGCGGCAAGGACCAGAGGATCGGCAAGGTGAGGATACGCCTC TCGACGCTGGAGATGGACAGGGTGTACACCAACGCGCACCGGCTCGTGGTGCTGCACCCG TCGGGGTTGCGCAAGAACGGCGACGTCTGCCTCGCCGTGCGCCTCACCTGCCTGTCCCTC GCCAGCGTCTTGCGCCTCTACGGCGAGCCGCTCCTCCCCGGGGCGCACTACGTCCACCCC TTCGCCGTCGCGCAGCTCGACGGCCTCAGGCGGCAGGCGGTGGGCGTCGTGGCGGCGCGG CTGGGCCGCGCCGAGCCGCCGCTGCGGCGGGAGGTCGTGGAGTACATGCTCGACGCCGGC TCCCACCTGTGGAGCATCCGGCGGAGCAGGGCCAACTTCCTCCGCGCCACGGCGCTGCTC TCCGGCGCCGCCGGCGCGGCGCGGTGGCTCGCCGACGTGTGCCACTGGAGGAGCCCCGCG ACGACGATCCTCGCGCACCTCCTGCTCGTCACCTTCGCCTGCTTCCCGGAGCTCATCCTG CCGACCGCGTTCCTCTACGCGTCCGTGGCCGGCGCCTGGAGCTATCGGCGGCGGCCGCGC CGCCCGCCGCAGGCGGACGCGGGGCTGTCGTGCGCCGAGGCGGCCGGCGCCGACGAGTTC GACGAGGAGGCGGACACGTTCCCGACGTCGAGGCCCGACGGCGTGGTGCGCGCGCGGTAC GACCGGCTGCGGACGGTGGCCGGGAGGATCCAGGCGGTGGTCAGCGACGTGGCGACGCAG GGGGAGCGGGTGCGGTCGCTGCTGGCGTGGAGGGACCCGAGGGCGACGGCGGTGTTCACG GCGGCCTGCCTCGCCGCCGCCGTCGTGGCGTACGCCACGCCGCCCCGGGTGGTGGCGCTC GTCGCCGGGCTGTACCTGCTCCGCCACCCGCGGTTCCGGAGCCGGATGCCGTCGGCCGCC GGCAACTTCTTCAAGAGGCTGCCGTCCCGCGCCGATACCATGCTATAG

Peptide Sequence

PEP ID	Os04t0472900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23640853:23643594:1 gene:Os04g0472900 transcript:Os04t0472900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0472900-01)
Sequence	MASLAGDGKSRPVNRPDGEPETTVSRVMACPYVFRAQAPPAMAKEAMATPTRPQVRETWP AGGGGGGGGWMGVGSGERVASAYDLVEQMHYLYVRVVRARGLTAAASTVAGGGGCNPYVE VRLGNYRGTTRHHERKAAPEWNQVFAFSRERVQASVLEVFVRDKDAVAAVARDGYVGRVA FDVGEAPVRVPPDSPLAPQWYRLEDVGGGGGRAVQGEVMLAVWVGTQADEAFADAWHAGA ASVRGGGDGVAAVQSTRSKVYVTPKLWYLRISVLEAQDVVPGAVAGAGGDKGRHGEAFVV VKVQVGGVTLRTKPCCRPTSPSWNEELVFVVAEPFDEPAVLVIEARAAHPGKDEIVSRAV LPLTLFERRLDRRGAAAATHTQSQWFSLEPFVHRPRHSPEEPAFAGRVHLRACLDGAYHV MDEPAMYASDTRPTARQLWRPPIGVLEVGVLGAQGLPPMKTAADGGRGTTDAYCVAKYGH KWVRTRTVVDSSTPRWNEQYTWEVYDPCTVLTLAVFDNCNLGNGGGGGKDQRIGKVRIRL STLEMDRVYTNAHRLVVLHPSGLRKNGDVCLAVRLTCLSLASVLRLYGEPLLPGAHYVHP FAVAQLDGLRRQAVGVVAARLGRAEPPLRREVVEYMLDAGSHLWSIRRSRANFLRATALL SGAAGAARWLADVCHWRSPATTILAHLLLVTFACFPELILPTAFLYASVAGAWSYRRRPR RPPQADAGLSCAEAAGADEFDEEADTFPTSRPDGVVRARYDRLRTVAGRIQAVVSDVATQ GERVRSLLAWRDPRATAVFTAACLAAAVVAYATPPRVVALVAGLYLLRHPRFRSRMPSAA GNFFKRLPSRADTML

Transcript Sequence

Transcript ID	Os04t0472900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23640853:23643594:1 gene:Os04g0472900 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium-dependent membrane targeting domain containing protein. (Os04t0472900-01)
Sequence	GATAGCTTCAAGCTTCTGCAAAGATTTTGCTTAGAAACAGCAAAGACAAAAAACCATTGC GTGGTGGCTCGTCGTACTAGCTGATGGCGCCACCTTTGCATGGCTTCCCTTGCCGGTGAC GGGAAAAGCCGACCGGTGAACCGCCCTGACGGCGAGCCGGAGACGACGGTGAGCCGGGTC ATGGCGTGTCCGTACGTGTTCCGTGCACAGGCGCCGCCGGCGATGGCCAAGGAGGCAATG GCGACACCGACACGGCCGCAGGTCAGGGAGACGTGGCCGGCGGGTGGCGGCGGCGGCGGC GGTGGTTGGATGGGCGTTGGCTCCGGCGAGAGGGTGGCGAGCGCGTACGACCTCGTGGAG CAGATGCACTACCTGTACGTGCGCGTCGTCAGGGCGCGCGGGCTCACGGCGGCGGCGAGC ACGGTCGCCGGCGGCGGCGGGTGCAACCCGTACGTGGAGGTGCGGCTCGGGAACTACCGG GGCACAACGCGGCACCACGAGCGGAAGGCGGCGCCGGAGTGGAACCAGGTGTTCGCCTTC TCGCGGGAGCGCGTCCAGGCCTCGGTGCTCGAGGTGTTCGTCAGGGACAAGGACGCCGTG GCGGCGGTGGCGCGAGACGGCTACGTTGGAAGGGTCGCGTTCGATGTCGGCGAGGCGCCC GTGCGCGTGCCGCCGGACAGCCCGCTCGCGCCGCAGTGGTACCGCCTCGAGGACGTCGGC GGCGGAGGCGGCAGGGCGGTGCAGGGAGAGGTCATGCTCGCGGTGTGGGTCGGCACGCAG GCCGACGAGGCGTTCGCGGACGCGTGGCACGCCGGCGCGGCGTCGGTGCGCGGAGGCGGC GACGGCGTGGCGGCCGTGCAGAGCACGCGGTCCAAGGTGTACGTGACGCCGAAGCTGTGG TACCTCCGGATAAGCGTGCTCGAGGCGCAGGACGTCGTCCCGGGCGCCGTCGCCGGCGCA GGCGGCGACAAGGGACGGCACGGCGAGGCCTTCGTCGTCGTCAAGGTGCAAGTCGGCGGC GTGACGCTCCGGACCAAGCCGTGCTGCCGCCCGACGAGCCCATCGTGGAACGAGGAGCTG GTGTTCGTCGTGGCGGAGCCGTTCGACGAGCCGGCGGTGCTCGTCATCGAGGCCCGGGCG GCGCACCCGGGCAAGGACGAGATCGTCAGCCGCGCCGTGCTGCCGCTCACCCTCTTCGAG AGGCGCCTCGACCGGCGCGGCGCGGCCGCGGCCACGCACACGCAGTCGCAGTGGTTCAGC CTGGAGCCGTTCGTGCACCGGCCGCGACACTCGCCGGAGGAGCCCGCCTTCGCCGGCCGC GTGCACCTCCGGGCGTGCCTCGACGGCGCCTACCACGTCATGGACGAGCCCGCCATGTAC GCCAGCGACACGCGCCCCACGGCGAGGCAGCTGTGGCGCCCGCCCATCGGCGTGCTCGAG GTCGGCGTCCTCGGCGCGCAGGGCCTCCCCCCGATGAAGACCGCCGCCGACGGCGGCCGG GGCACCACCGACGCGTACTGCGTCGCCAAGTACGGCCACAAGTGGGTGCGCACCCGCACC GTCGTCGACTCCTCCACCCCGCGGTGGAACGAGCAGTACACCTGGGAGGTCTACGACCCG TGCACGGTGCTCACGCTCGCCGTGTTCGACAACTGCAACCTCGGCAATGGCGGCGGCGGC GGCAAGGACCAGAGGATCGGCAAGGTGAGGATACGCCTCTCGACGCTGGAGATGGACAGG GTGTACACCAACGCGCACCGGCTCGTGGTGCTGCACCCGTCGGGGTTGCGCAAGAACGGC GACGTCTGCCTCGCCGTGCGCCTCACCTGCCTGTCCCTCGCCAGCGTCTTGCGCCTCTAC GGCGAGCCGCTCCTCCCCGGGGCGCACTACGTCCACCCCTTCGCCGTCGCGCAGCTCGAC GGCCTCAGGCGGCAGGCGGTGGGCGTCGTGGCGGCGCGGCTGGGCCGCGCCGAGCCGCCG CTGCGGCGGGAGGTCGTGGAGTACATGCTCGACGCCGGCTCCCACCTGTGGAGCATCCGG CGGAGCAGGGCCAACTTCCTCCGCGCCACGGCGCTGCTCTCCGGCGCCGCCGGCGCGGCG CGGTGGCTCGCCGACGTGTGCCACTGGAGGAGCCCCGCGACGACGATCCTCGCGCACCTC CTGCTCGTCACCTTCGCCTGCTTCCCGGAGCTCATCCTGCCGACCGCGTTCCTCTACGCG TCCGTGGCCGGCGCCTGGAGCTATCGGCGGCGGCCGCGCCGCCCGCCGCAGGCGGACGCG GGGCTGTCGTGCGCCGAGGCGGCCGGCGCCGACGAGTTCGACGAGGAGGCGGACACGTTC CCGACGTCGAGGCCCGACGGCGTGGTGCGCGCGCGGTACGACCGGCTGCGGACGGTGGCC GGGAGGATCCAGGCGGTGGTCAGCGACGTGGCGACGCAGGGGGAGCGGGTGCGGTCGCTG CTGGCGTGGAGGGACCCGAGGGCGACGGCGGTGTTCACGGCGGCCTGCCTCGCCGCCGCC GTCGTGGCGTACGCCACGCCGCCCCGGGTGGTGGCGCTCGTCGCCGGGCTGTACCTGCTC CGCCACCCGCGGTTCCGGAGCCGGATGCCGTCGGCCGCCGGCAACTTCTTCAAGAGGCTG CCGTCCCGCGCCGATACCATGCTATAGTATATGATGCGTCGTTTCTTGTGTCTTATGATG TTATAAAACTTTTTTTTTCTTGTAATTCATCGCCAATGATGC