Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0471400-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:23553939:23558029:-1 gene:Os04g0471400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0418A01.7 protein. (Os04t0471400-01);Similar to H0418A01.7 protein. (Os04t0471400-02);Similar to H0418A01.7 protein. (Os04t0471400-03)
Sequence	TTGGACCATACTGATGAGGTTATGCCAGTAGATCTGCAAGTCAATAGTTGCACCAAAGCA ATTCGGCAAACTGAGGTTGCTGTACCCTCTTGGCGATCGAAAAATCTTGACTCATCACGA GAGCCATCAGAAAAGAAGTGTAAATTGGTAGTCAAAGTAGGATCCTTGACGCGGACAGAA GAGGTGGCATCTAATTCTAGCACGGTTTCAGACCCGATGGCCTCAAAAACCTGTCCTGTT TGCAAAGTGTTTGCTTCTACTTCAAACACAACCTTGAATGCCCATATGGACCAGTGCCTT TCTGTTGAATCTAATACTGAGCCAGTGGAAAAAGTTATCTTGAAACCGAAAGTTAAGCCA AGGAAGAAGCGACTGATGGTGGACATTTACAAGACTGCCCGTCTGTTCACTCTTGAGGAT CTTGATCAGAGGAATGGCACTAACTGGGCTATCGAATTGGCTACACCCACCACGAACAAG GAGGTTTGCACTGAGAACCGTAGCCCAGAAGTGGTGCCGTTTGACCCAAGAGACGACGAA AGAGAAGGCGATGTCTATGTTGATTCTAATGGGATAAAAATTCGGATTTTGTCCAAGTCT AGTGATGCGTCTTTGGTGTTGAGGGATGAACATAATTCAAGGAAAGTTGCCAAGAACGAG ACTGGAAAAAGTATGTTGATGAGCAAGACGTGCTTGAAATCCAAAATATGCAAGAATAAG AGGCTCAAGTTTCCAGGGAAGAAGCACAGCAAAACTAACCGATTGAATACCCAGGTTCGA ACACATACAGATGGAGATATGCATGAGCACACCTCTGAGGACGAAGAGGAGTCCACTATG CATGTGCAGAAACCTACTGAAAGCACAAGTTATGGTGGCTCCGAAACTATAAGGCAATGG GTGGGCTCCAAACGCTCAGGTCTCTCTAAGAATTGTGCCCGAGAGGTTACTGATAAAGCA TCCAAGAGTATAACGCCTGGAACCAAGAAGTTGGCTAGGAGCAGCATTCGTGGTTTTGAT GATTCTCAAATATCAGATAGTCCTCCTGAGGCATTTTCTTCGCAACCGCCGGAAGAGATG ACGATCACTTCAGAAGCTAATGATGATGACGAGAGGAATGGTACTTCGAGATTGCTCAGA TCGATTCCTAGATGGTCTTTAAAAACTACTCCATCCAGCAATGTCATACCAAAAGTACCT AGGTCTGCTGCTGCTCTAGCCAAAAGGAAAATAAAGGAGATCGGAAGGAGAGAGTCCTAT AGGTCTGATAACTATGATACAGTGAGGAATTCCACCTCGATCAGAAACTCTGTACGTCGG GGTCCTTCCTCCTCTGTTGCTGGGCTGAGTGATGGCTCAAATAGGGTTGCATCTACCAAG AAGTTCCGGAAGAACCGATCTCTGTTGAGGACTGGTAGGCGTGAATTCTCACCTTCTAAC AGTGGGCTAGTTCATGGTTTTGGTCAAGACCATGGATCTAATCCCAATCATACAAACAAG AGGTTCAGGGTTAGTAACAAGGAAACCTCCAAGAAGCTTAAGCACACTCAAGAAGATACT GCAGATAATGACTTCTCTTATGAAAGTGATGTACCAGCATTAGGACAAGGGGATGATCAA TACGATGCGGCTCAACAAGCAGGAATTTCACAGATGTATTATGAAGGTGAAGAGCCTGAA ACTGAAATGCAATGTGCATCACCCTCCAGAAGTGATCCTGTAGACTGCAGCAATGATATG AGCAGCGATTCTTTGAGTCCGGAAAATAATGAGACGGCAGATGATGTTTTGGTGGAAGGC TATAGTGTAGCAATTGTGGATCCATGCTCTAATGAGAAATCTGCATATCATGCTCATATA CCCAACGACGTTGCCAATAATGAGGTGGAAGAATGGCAAATTGATCCGTCTTCAACTAAG GAATCTAGTGCCTGCTTGACCAATAATAGGGACATGGGTCTTGGAGCTCCTCAGGATAAC TCATCGATTACATCAAACAGAGAAGATTCTAACCTTGATCACGGTTTGGTTTTTGATCGT GGCTCATCCGGCTCTCCTGTTTCAACTGCCTCCACACTGTCTCCTTCAACTTCTTTGAGG GACTCTAGGACTAACAGGTCTGAGCCAGGTCCATCCACTGTTAGTCTTCCAACTGTTGAG GAACGGGTTTCTGGGAGCTCGAATCAAGAAACCAAGTCGACACCTCTTGCCAGAGAAGGT GAACAGTTGCCTGAAAAGTCCTGTTGTTGCAATTGTCGGGAGAGCATTTCCAGGGATTCT CAGGTGCACGATCAAAGTGCGATGGCTAGACCAGTGCCAGCTTTTACTGGAAGGCCGGTT CCACAGTTGAACATAGGTTTGCGTGCGTCTTCATCGTTCAGCACATATCAAAGAACCAGC ACAAAGGCAAATCCTTGCTTAGATTCACATGATCAGACATTAGCTGGTAAGGTTTCAGCT GAGCCTACCATGACCCACCCATCTTATACGACAGATTGTATGAGCCCATCAATACAAACT CAGCTTCCTTCACCATCAAATCCTATTTTGAGATTGATGGGCAAGAACTTGATGGTGATG AACAGTGAGGAGAGTGGACATCCTCAGGCACCCAGTTCAGATTACATCATGAGAGGAAAT TACATGGCACCTGGTTGTTTTATGCCTCAAAACTACCAACATATTGGTGATCCTGCATTT ATGAACACAACACCGTCAACAGCCAATCATCAAATTCCTCTGTCAAGTGTACAAGCTGGC AACTTTTCTGCTCCTACGTTGCATAATGGTTCCATGGTGCAATCTGATTATCATTCTCCA CAAAAGCCATACAGGAACCTCCTTCCAGTCATGCATCATCCATCCTACATGATGAAAGAA GTAATCATGATTGATGACTCTCCTGAGCACAGAAGCGATCCACAAATCAGTATGCTTCTT CCTTCTGCACCTTCTCCAGCTACAATCTCGGTCCCGAACACTGTGGCATCAAGGCCATTT TACTGCCTTCCATCCCAAAACCAGCTTTTACCAAGGGAGAGTGCTGTTGGACCCCTGCCT GTATTCACAAACATTAACCCAATTGTTGGTGTTAGCTCATCAAGTCAAGGAAACAACGCA GAAGTAGCACATCCTTACATGTCAAATCCATTCTATGTGCAATCTCCGGCTGGTTACATA AACCCATCGGTCTACTATTCGCAGAATTTACGGTGA

Peptide Sequence

PEP ID	Os04t0471400-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:23553939:23558029:-1 gene:Os04g0471400 transcript:Os04t0471400-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0418A01.7 protein. (Os04t0471400-01);Similar to H0418A01.7 protein. (Os04t0471400-02);Similar to H0418A01.7 protein. (Os04t0471400-03)
Sequence	LDHTDEVMPVDLQVNSCTKAIRQTEVAVPSWRSKNLDSSREPSEKKCKLVVKVGSLTRTE EVASNSSTVSDPMASKTCPVCKVFASTSNTTLNAHMDQCLSVESNTEPVEKVILKPKVKP RKKRLMVDIYKTARLFTLEDLDQRNGTNWAIELATPTTNKEVCTENRSPEVVPFDPRDDE REGDVYVDSNGIKIRILSKSSDASLVLRDEHNSRKVAKNETGKSMLMSKTCLKSKICKNK RLKFPGKKHSKTNRLNTQVRTHTDGDMHEHTSEDEEESTMHVQKPTESTSYGGSETIRQW VGSKRSGLSKNCAREVTDKASKSITPGTKKLARSSIRGFDDSQISDSPPEAFSSQPPEEM TITSEANDDDERNGTSRLLRSIPRWSLKTTPSSNVIPKVPRSAAALAKRKIKEIGRRESY RSDNYDTVRNSTSIRNSVRRGPSSSVAGLSDGSNRVASTKKFRKNRSLLRTGRREFSPSN SGLVHGFGQDHGSNPNHTNKRFRVSNKETSKKLKHTQEDTADNDFSYESDVPALGQGDDQ YDAAQQAGISQMYYEGEEPETEMQCASPSRSDPVDCSNDMSSDSLSPENNETADDVLVEG YSVAIVDPCSNEKSAYHAHIPNDVANNEVEEWQIDPSSTKESSACLTNNRDMGLGAPQDN SSITSNREDSNLDHGLVFDRGSSGSPVSTASTLSPSTSLRDSRTNRSEPGPSTVSLPTVE ERVSGSSNQETKSTPLAREGEQLPEKSCCCNCRESISRDSQVHDQSAMARPVPAFTGRPV PQLNIGLRASSSFSTYQRTSTKANPCLDSHDQTLAGKVSAEPTMTHPSYTTDCMSPSIQT QLPSPSNPILRLMGKNLMVMNSEESGHPQAPSSDYIMRGNYMAPGCFMPQNYQHIGDPAF MNTTPSTANHQIPLSSVQAGNFSAPTLHNGSMVQSDYHSPQKPYRNLLPVMHHPSYMMKE VIMIDDSPEHRSDPQISMLLPSAPSPATISVPNTVASRPFYCLPSQNQLLPRESAVGPLP VFTNINPIVGVSSSSQGNNAEVAHPYMSNPFYVQSPAGYINPSVYYSQNLR

Transcript Sequence

Transcript ID	Os04t0471400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23553939:23558029:-1 gene:Os04g0471400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0418A01.7 protein. (Os04t0471400-01);Similar to H0418A01.7 protein. (Os04t0471400-02);Similar to H0418A01.7 protein. (Os04t0471400-03)
Sequence	GATTGGACCATACTGATGAGGTTATGCCAGTAGATCTGCAAGTCAATAGTTGCACCAAAG CAATTCGGCAAACTGAGGTTGCTGTACCCTCTTGGCGATCGAAAAATCTTGACTCATCAC GAGAGCCATCAGAAAAGAAGTGTAAATTGGTAGTCAAAGTAGGATCCTTGACGCGGACAG AAGAGGTGGCATCTAATTCTAGCACGGTTTCAGACCCGATGGCCTCAAAAACCTGTCCTG TTTGCAAAGTGTTTGCTTCTACTTCAAACACAACCTTGAATGCCCATATGGACCAGTGCC TTTCTGTTGAATCTAATACTGAGCCAGTGGAAAAAGTTATCTTGAAACCGAAAGTTAAGC CAAGGAAGAAGCGACTGATGGTGGACATTTACAAGACTGCCCGTCTGTTCACTCTTGAGG ATCTTGATCAGAGGAATGGCACTAACTGGGCTATCGAATTGGCTACACCCACCACGAACA AGGAGGTTTGCACTGAGAACCGTAGCCCAGAAGTGGTGCCGTTTGACCCAAGAGACGACG AAAGAGAAGGCGATGTCTATGTTGATTCTAATGGGATAAAAATTCGGATTTTGTCCAAGT CTAGTGATGCGTCTTTGGTGTTGAGGGATGAACATAATTCAAGGAAAGTTGCCAAGAACG AGACTGGAAAAAGTATGTTGATGAGCAAGACGTGCTTGAAATCCAAAATATGCAAGAATA AGAGGCTCAAGTTTCCAGGGAAGAAGCACAGCAAAACTAACCGATTGAATACCCAGGTTC GAACACATACAGATGGAGATATGCATGAGCACACCTCTGAGGACGAAGAGGAGTCCACTA TGCATGTGCAGAAACCTACTGAAAGCACAAGTTATGGTGGCTCCGAAACTATAAGGCAAT GGGTGGGCTCCAAACGCTCAGGTCTCTCTAAGAATTGTGCCCGAGAGGTTACTGATAAAG CATCCAAGAGTATAACGCCTGGAACCAAGAAGTTGGCTAGGAGCAGCATTCGTGGTTTTG ATGATTCTCAAATATCAGATAGTCCTCCTGAGGCATTTTCTTCGCAACCGCCGGAAGAGA TGACGATCACTTCAGAAGCTAATGATGATGACGAGAGGAATGGTACTTCGAGATTGCTCA GATCGATTCCTAGATGGTCTTTAAAAACTACTCCATCCAGCAATGTCATACCAAAAGTAC CTAGGTCTGCTGCTGCTCTAGCCAAAAGGAAAATAAAGGAGATCGGAAGGAGAGAGTCCT ATAGGTCTGATAACTATGATACAGTGAGGAATTCCACCTCGATCAGAAACTCTGTACGTC GGGGTCCTTCCTCCTCTGTTGCTGGGCTGAGTGATGGCTCAAATAGGGTTGCATCTACCA AGAAGTTCCGGAAGAACCGATCTCTGTTGAGGACTGGTAGGCGTGAATTCTCACCTTCTA ACAGTGGGCTAGTTCATGGTTTTGGTCAAGACCATGGATCTAATCCCAATCATACAAACA AGAGGTTCAGGGTTAGTAACAAGGAAACCTCCAAGAAGCTTAAGCACACTCAAGAAGATA CTGCAGATAATGACTTCTCTTATGAAAGTGATGTACCAGCATTAGGACAAGGGGATGATC AATACGATGCGGCTCAACAAGCAGGAATTTCACAGATGTATTATGAAGGTGAAGAGCCTG AAACTGAAATGCAATGTGCATCACCCTCCAGAAGTGATCCTGTAGACTGCAGCAATGATA TGAGCAGCGATTCTTTGAGTCCGGAAAATAATGAGACGGCAGATGATGTTTTGGTGGAAG GCTATAGTGTAGCAATTGTGGATCCATGCTCTAATGAGAAATCTGCATATCATGCTCATA TACCCAACGACGTTGCCAATAATGAGGTGGAAGAATGGCAAATTGATCCGTCTTCAACTA AGGAATCTAGTGCCTGCTTGACCAATAATAGGGACATGGGTCTTGGAGCTCCTCAGGATA ACTCATCGATTACATCAAACAGAGAAGATTCTAACCTTGATCACGGTTTGGTTTTTGATC GTGGCTCATCCGGCTCTCCTGTTTCAACTGCCTCCACACTGTCTCCTTCAACTTCTTTGA GGGACTCTAGGACTAACAGGTCTGAGCCAGGTCCATCCACTGTTAGTCTTCCAACTGTTG AGGAACGGGTTTCTGGGAGCTCGAATCAAGAAACCAAGTCGACACCTCTTGCCAGAGAAG GTGAACAGTTGCCTGAAAAGTCCTGTTGTTGCAATTGTCGGGAGAGCATTTCCAGGGATT CTCAGGTGCACGATCAAAGTGCGATGGCTAGACCAGTGCCAGCTTTTACTGGAAGGCCGG TTCCACAGTTGAACATAGGTTTGCGTGCGTCTTCATCGTTCAGCACATATCAAAGAACCA GCACAAAGGCAAATCCTTGCTTAGATTCACATGATCAGACATTAGCTGGTAAGGTTTCAG CTGAGCCTACCATGACCCACCCATCTTATACGACAGATTGTATGAGCCCATCAATACAAA CTCAGCTTCCTTCACCATCAAATCCTATTTTGAGATTGATGGGCAAGAACTTGATGGTGA TGAACAGTGAGGAGAGTGGACATCCTCAGGCACCCAGTTCAGATTACATCATGAGAGGAA ATTACATGGCACCTGGTTGTTTTATGCCTCAAAACTACCAACATATTGGTGATCCTGCAT TTATGAACACAACACCGTCAACAGCCAATCATCAAATTCCTCTGTCAAGTGTACAAGCTG GCAACTTTTCTGCTCCTACGTTGCATAATGGTTCCATGGTGCAATCTGATTATCATTCTC CACAAAAGCCATACAGGAACCTCCTTCCAGTCATGCATCATCCATCCTACATGATGAAAG AAGTAATCATGATTGATGACTCTCCTGAGCACAGAAGCGATCCACAAATCAGTATGCTTC TTCCTTCTGCACCTTCTCCAGCTACAATCTCGGTCCCGAACACTGTGGCATCAAGGCCAT TTTACTGCCTTCCATCCCAAAACCAGCTTTTACCAAGGGAGAGTGCTGTTGGACCCCTGC CTGTATTCACAAACATTAACCCAATTGTTGGTGTTAGCTCATCAAGTCAAGGAAACAACG CAGAAGTAGCACATCCTTACATGTCAAATCCATTCTATGTGCAATCTCCGGCTGGTTACA TAAACCCATCGGTCTACTATTCGCAGAATTTACGGTGATGATTCCTCAGTAACTCAAATG AAGAAGAGAACTGCAATTGGTCATCAATGCCAACGTGGGAATAATGAGAGCTTTGTGATG AGTCTAAAATTCTGAGAGTAGTGAACCTTCATAAGATGCCTGACTTTTTCATGAGGTTTT TTCACATAGGTTGCCTCTTTAGTTTTTCGTTTCAGGTAAACTTGTTTGCCTTCAAAGTAC TTCAATTACATCCTGCAAAGTTCC