Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0470700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23512858:23522971:-1 gene:Os04g0470700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 7A, amino acid permease 13, amino acid/auxin permease 13 description:Amino acid transporter, transmembrane family protein. (Os04t0470700-01)
Sequence	ATGGCGCTCGGCGACGGGGACGACGGCGCGGCCGCCGCCGCCGTTCCTCTCATCTCGGAT CGCCCCAAGCATGCCGCCATCGTCAGAAGCGGGACGGAGTGGACGGCGGCGGCGCACGTG ATCACGGCGGTGATCGGGTCCGGGGTGCTGTCGCTGGCGTGGAGCGTGGCGCAGCTGGGG TGGCTGGCGGGGCCGGGGATGATGCTCGTGTTCGCGGCCGTGACGGCGCTGCAGTCGGCG CTGTTCGCCGACTGCTACCGCTCGCCGGACCCGGAGGTCGGCCCGCACCGCAACCGCACC TACGCCAACGCCGTCGAGCGCAACCTAGGTAGCTCGAGCGCGTGGGTCTGCTTGTTGCTG CAGCAAACGGCCTTGTTCGGCTACGGCATCGCCTACACCATCACCGCCTCCATCAGTTGC AGGGCGATCCTGAGGTCCAACTGCTACCACACGCACGGCCACGACGCGCCCTGCAAATAC GGGGGTAGCTACTACATGCTCATGTTCGGCGCGGCGCAGCTGTTCCTCTCCTTCATACCG GACTTCCACGACATGGCGTGGCTGTCGGTCCTCGCCGCGGTCATGTCGTTCTCCTACTCG TTCATCGGCCTCGGCCTCGGCCTCGCCAACACAATTGCTAATGGAACGATCAAAGGAAGC ATAACAGGTGCTCCAACGAGAACCCCTGTGCAGAAGGTCTGGCACGTCTCGCAGGCCATC GGCGACATCGCATTCGCGTACCCGTACTCATTAATCCTCTTGGAAATTCAGGACACACTG AAGGCTCCACCGGCCGAGAACAAGACGATGAAGAAGGCGTCCATCATCTCGATCGTCGTC ACCACCTTCTTCTACCTCTGCTGCGGCTGCTTCGGCTACGCCGCCTTCGGGAGCGACGCC CCTGGCAACCTCCTCACCGGCTTCGGCTTCTACGAGCCCTACTGGCTCATCGACTTCGCC AACGCCTGCATCATCCTCCACCTGCTCGGCGGCTACCAGGTGTACAGCCAGCCGATATAC CAGTTCGCGGACAGGTTCTTCGCGGAGAGGTACCCGGCGAGCCGGTTCGTGAACGACTTC CACACGGTGAAGCTGCCGCTGCTGCCGCCGTGTCGGGTGAACCTCCTGCGGGTGTGCTTC CGGACGGTGTACGTGGCGAGCACCACGGCGGTGGCGCTCGCCTTCCCCTACTTCAACGAG GTGCTCGCGCTGCTCGGCGCCCTCAACTTCTGGCCGCTCGCCATCTACTTCCCCGTGGAG ATGTACTTCATCCAGCGCCATGTCCCGCGGTGGTCGCCCCGGTGGGTCGTGCTGCAGTCG TTCAGCGTCCTCTGCCTCCTCGTCAGCGCCTTCGCGCTCGTCGGCTCCATCCAGGGCCTC ATCAGCCAGAAGCTAGGCTAA

Peptide Sequence

PEP ID	Os04t0470700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23512858:23522971:-1 gene:Os04g0470700 transcript:Os04t0470700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 7A, amino acid permease 13, amino acid/auxin permease 13 description:Amino acid transporter, transmembrane family protein. (Os04t0470700-01)
Sequence	MALGDGDDGAAAAAVPLISDRPKHAAIVRSGTEWTAAAHVITAVIGSGVLSLAWSVAQLG WLAGPGMMLVFAAVTALQSALFADCYRSPDPEVGPHRNRTYANAVERNLGSSSAWVCLLL QQTALFGYGIAYTITASISCRAILRSNCYHTHGHDAPCKYGGSYYMLMFGAAQLFLSFIP DFHDMAWLSVLAAVMSFSYSFIGLGLGLANTIANGTIKGSITGAPTRTPVQKVWHVSQAI GDIAFAYPYSLILLEIQDTLKAPPAENKTMKKASIISIVVTTFFYLCCGCFGYAAFGSDA PGNLLTGFGFYEPYWLIDFANACIILHLLGGYQVYSQPIYQFADRFFAERYPASRFVNDF HTVKLPLLPPCRVNLLRVCFRTVYVASTTAVALAFPYFNEVLALLGALNFWPLAIYFPVE MYFIQRHVPRWSPRWVVLQSFSVLCLLVSAFALVGSIQGLISQKLG

Transcript Sequence

Transcript ID	Os04t0470700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23512858:23522971:-1 gene:Os04g0470700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:amino acid permease 7A, amino acid permease 13, amino acid/auxin permease 13 description:Amino acid transporter, transmembrane family protein. (Os04t0470700-01)
Sequence	TGAGCGACAGCGAGCCTGTCTCTTAAAAAAAATAAAATTAGTCCCCTCCACGCGCCGCGT GTTCCTCGTCCTCTGGTTGCCAGGACAGAGCACGGGGCCCGGCGGCGATGGCGCTCGGCG ACGGGGACGACGGCGCGGCCGCCGCCGCCGTTCCTCTCATCTCGGATCGCCCCAAGCATG CCGCCATCGTCAGAAGCGGGACGGAGTGGACGGCGGCGGCGCACGTGATCACGGCGGTGA TCGGGTCCGGGGTGCTGTCGCTGGCGTGGAGCGTGGCGCAGCTGGGGTGGCTGGCGGGGC CGGGGATGATGCTCGTGTTCGCGGCCGTGACGGCGCTGCAGTCGGCGCTGTTCGCCGACT GCTACCGCTCGCCGGACCCGGAGGTCGGCCCGCACCGCAACCGCACCTACGCCAACGCCG TCGAGCGCAACCTAGGTAGCTCGAGCGCGTGGGTCTGCTTGTTGCTGCAGCAAACGGCCT TGTTCGGCTACGGCATCGCCTACACCATCACCGCCTCCATCAGTTGCAGGGCGATCCTGA GGTCCAACTGCTACCACACGCACGGCCACGACGCGCCCTGCAAATACGGGGGTAGCTACT ACATGCTCATGTTCGGCGCGGCGCAGCTGTTCCTCTCCTTCATACCGGACTTCCACGACA TGGCGTGGCTGTCGGTCCTCGCCGCGGTCATGTCGTTCTCCTACTCGTTCATCGGCCTCG GCCTCGGCCTCGCCAACACAATTGCTAATGGAACGATCAAAGGAAGCATAACAGGTGCTC CAACGAGAACCCCTGTGCAGAAGGTCTGGCACGTCTCGCAGGCCATCGGCGACATCGCAT TCGCGTACCCGTACTCATTAATCCTCTTGGAAATTCAGGACACACTGAAGGCTCCACCGG CCGAGAACAAGACGATGAAGAAGGCGTCCATCATCTCGATCGTCGTCACCACCTTCTTCT ACCTCTGCTGCGGCTGCTTCGGCTACGCCGCCTTCGGGAGCGACGCCCCTGGCAACCTCC TCACCGGCTTCGGCTTCTACGAGCCCTACTGGCTCATCGACTTCGCCAACGCCTGCATCA TCCTCCACCTGCTCGGCGGCTACCAGGTGTACAGCCAGCCGATATACCAGTTCGCGGACA GGTTCTTCGCGGAGAGGTACCCGGCGAGCCGGTTCGTGAACGACTTCCACACGGTGAAGC TGCCGCTGCTGCCGCCGTGTCGGGTGAACCTCCTGCGGGTGTGCTTCCGGACGGTGTACG TGGCGAGCACCACGGCGGTGGCGCTCGCCTTCCCCTACTTCAACGAGGTGCTCGCGCTGC TCGGCGCCCTCAACTTCTGGCCGCTCGCCATCTACTTCCCCGTGGAGATGTACTTCATCC AGCGCCATGTCCCGCGGTGGTCGCCCCGGTGGGTCGTGCTGCAGTCGTTCAGCGTCCTCT GCCTCCTCGTCAGCGCCTTCGCGCTCGTCGGCTCCATCCAGGGCCTCATCAGCCAGAAGC TAGGCTAAAGATTTAGCCTAGCATCCTGAATTTCGGATTTGCTTTTTCTTTGTGTAACCG TAATGGGATGAGAATGCATTTGGTGGTCGTGTGTTGTTTGTAACAACTGGGGAGCGGAGC TTTGTCCCTGGTGAATGGCGCGATGAACTCATGAACAATAGCATAGTGGTGGTGGTACAT TGTGTCTGCAGGGGTCAGAGGGTGGTGGCACTCTGTTTTTCAGTGCCTTTCCTCCTGTGC TGCAGAGAAACTGCTCCTATATATGTACAGAATGTCGTCATATTATTGCCATGATACTTG GAACGGTG