Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0466600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:23315118:23318842:1 gene:Os04g0466600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AGMATINE IMINOHYDROLASE description:Agmatine deiminase domain containing protein. (Os04t0466600-01)
Sequence

ATGGCGAAGGCGACGACGATGGAGGGGCGCCCGGCGAAGATGGGGTTCCGGATGCCGGCG
GAGTGGGAGCCGCACGAGCAGTGCTGGATGGGCTGGCCTGAGCGTCGAGACAATTGGCGA
GAGCTTGCTGGTCCAGCTCGAAAAGTATTTGCAAGAACTGCTATTGCCATTTCAAAGTTT
GAGTCTGTTACTATATGTGCAAGTGCCAAGCAGTATCCCTATGTCCATGAGCTAATGCTA
CATCAACCAAACATCAGGGTGGTCGAGATGAGCATGAATGATTGCTGGTTCCGTGATATT
GGTCCCACTTTTATTGTTCGTAAAGGTGCACCAGGGTTAGGAATCACAGAAAAAAATATA
GCAGGAATTGATTGGGAATTTAACGCCTGGGGAGGAGCCACTGATGGTTGCTATGTTGAT
TGGAGCCTTGACAGCTATGTTGCCAAGAAAATAGTTGAGATTGAGAGGATCCCTAGATTT
CCACACACGATGGTTCTTGAAGGTGGAAGCATTCATGTAGATGGAGAAGGTACATGCATC
ACAACAGAAGAATGCTTGTTGAATCCTAACAGAAACCCCAACATGACCAAACTAGAGATA
GAGAATGAGCTGAAGGATTTTCTTGGAGTCGCAAAGGTCATCTGGATACCTCATGGGCTT
TATGGTGATGATGATACAAATGGTCATGTTGACAATCTATGCTGCTTCATTAAACCTGGG
GTGGTCCTCTTGTCATGGACCGATGATGAGAACGACCCACAGTACCAAAGGTCCGTTGAT
GCACTCTCAACTCTCTCCAAGTCCGTTGATGCGAAAGGACGGCAGATAGAAGTTGTGAAA
ATCCACGTCCCAGGGCCTCTGTACATGACAAAGGAAGAGTCAGAGGGTGTTGTAAAAACA
GAGCATGCTATACCGAGGGAACCAGGCACGAGATTGGCTGCCTCGTACGTAAACTTCTAC
ATAGCCAATGGCGGAATTGTAGCACCAGCTTTTGGCGACAAGTGGGACGAAGAAGCGTGT
GCTGTTCTTCAGAAGGCATTTCCTGATCATGAGGTGGTGATGGTGGAAGGCGCAAGAGAG
ATCGTGCTGGCAGGGGGAAACATACACTGCATCACGCAGCAGCAGCCTGTACGCCCGTCG
TAG

Peptide Sequence

PEP ID

Os04t0466600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:23315118:23318842:1 gene:Os04g0466600 transcript:Os04t0466600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AGMATINE IMINOHYDROLASE description:Agmatine deiminase domain containing protein. (Os04t0466600-01)
Sequence

MAKATTMEGRPAKMGFRMPAEWEPHEQCWMGWPERRDNWRELAGPARKVFARTAIAISKF
ESVTICASAKQYPYVHELMLHQPNIRVVEMSMNDCWFRDIGPTFIVRKGAPGLGITEKNI
AGIDWEFNAWGGATDGCYVDWSLDSYVAKKIVEIERIPRFPHTMVLEGGSIHVDGEGTCI
TTEECLLNPNRNPNMTKLEIENELKDFLGVAKVIWIPHGLYGDDDTNGHVDNLCCFIKPG
VVLLSWTDDENDPQYQRSVDALSTLSKSVDAKGRQIEVVKIHVPGPLYMTKEESEGVVKT
EHAIPREPGTRLAASYVNFYIANGGIVAPAFGDKWDEEACAVLQKAFPDHEVVMVEGARE
IVLAGGNIHCITQQQPVRPS

Transcript Sequence

Transcript ID

Os04t0466600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:23315118:23318842:1 gene:Os04g0466600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AGMATINE IMINOHYDROLASE description:Agmatine deiminase domain containing protein. (Os04t0466600-01)
Sequence

GGGACGCCCCCATTTTTCCCATCGCTTTTGCTTTTGCTGAGCGCAGATCCTTCGCCAATT
GGGCGCTAATCAGGCGGGTATTTTGGATATTTAGGTTTAGGGAGGAGGAAGAGGAGAGGT
GGTTCATCAGGTAGAAGAGGAGAAGGAGGATGGCGAAGGCGACGACGATGGAGGGGCGCC
CGGCGAAGATGGGGTTCCGGATGCCGGCGGAGTGGGAGCCGCACGAGCAGTGCTGGATGG
GCTGGCCTGAGCGTCGAGACAATTGGCGAGAGCTTGCTGGTCCAGCTCGAAAAGTATTTG
CAAGAACTGCTATTGCCATTTCAAAGTTTGAGTCTGTTACTATATGTGCAAGTGCCAAGC
AGTATCCCTATGTCCATGAGCTAATGCTACATCAACCAAACATCAGGGTGGTCGAGATGA
GCATGAATGATTGCTGGTTCCGTGATATTGGTCCCACTTTTATTGTTCGTAAAGGTGCAC
CAGGGTTAGGAATCACAGAAAAAAATATAGCAGGAATTGATTGGGAATTTAACGCCTGGG
GAGGAGCCACTGATGGTTGCTATGTTGATTGGAGCCTTGACAGCTATGTTGCCAAGAAAA
TAGTTGAGATTGAGAGGATCCCTAGATTTCCACACACGATGGTTCTTGAAGGTGGAAGCA
TTCATGTAGATGGAGAAGGTACATGCATCACAACAGAAGAATGCTTGTTGAATCCTAACA
GAAACCCCAACATGACCAAACTAGAGATAGAGAATGAGCTGAAGGATTTTCTTGGAGTCG
CAAAGGTCATCTGGATACCTCATGGGCTTTATGGTGATGATGATACAAATGGTCATGTTG
ACAATCTATGCTGCTTCATTAAACCTGGGGTGGTCCTCTTGTCATGGACCGATGATGAGA
ACGACCCACAGTACCAAAGGTCCGTTGATGCACTCTCAACTCTCTCCAAGTCCGTTGATG
CGAAAGGACGGCAGATAGAAGTTGTGAAAATCCACGTCCCAGGGCCTCTGTACATGACAA
AGGAAGAGTCAGAGGGTGTTGTAAAAACAGAGCATGCTATACCGAGGGAACCAGGCACGA
GATTGGCTGCCTCGTACGTAAACTTCTACATAGCCAATGGCGGAATTGTAGCACCAGCTT
TTGGCGACAAGTGGGACGAAGAAGCGTGTGCTGTTCTTCAGAAGGCATTTCCTGATCATG
AGGTGGTGATGGTGGAAGGCGCAAGAGAGATCGTGCTGGCAGGGGGAAACATACACTGCA
TCACGCAGCAGCAGCCTGTACGCCCGTCGTAGATGATACTGCGTATATAGTATTATGAAT
TTGGACATGGGACTAGTCCAGATTCGTAGTACTATATGTCCAGGGAGTAGATGGCACTAT
AGCAGCCATGCCCTATCGTGAATTCGTGATAAGCTACATCATTTGCTACCCAAAATGGCG
ACCCGATCATACACCATTGATTACCCAAAACCAAATGAATGAATTGATAGATTACCCAAA
ACCAAATGAATGAGTTGATAGAATAAGGCCGCAGACAAACATTGTGATTTGTGAGCTTGT
GTGTAGGGGATGTGGTTGCACCAGCGTGATGGATATGGTTGTAAGTTGCAGTAGTGTAAG
CACGTTGGAAACTGCCTTATGGCCTTTGCCAACGTTGACCAGGCGAATGGAAATGAAAAT
GGCTTTGAGGCTGTCTCGGT