Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0465600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:23278475:23279374:1 gene:Os04g0465600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os04t0465600-01)
Sequence

ATGGCGTCCAAGGTTGAGCTGGTGGTGGAGGTGAAGTCGCCGGCGGACAAGCTGTGGACG
GCGCTGCGCGACTCGACGGAGCTGTTCCCCAAGATCTTCCCCGAGCAGTACAAGAGCATC
GAGACCGTCGAGGGCGACGGCAAGTCCGCCGGCACCGTCCGCCTCCTCAAGTACACCGAA
GGGGTGCCGATGGTGACGTTCGCGAAGGAGAAGGTGGAGGTGGCGGACGACGAGAAGAAG
GTGGTGTCGTACAGCGTGGTGGACGGCGAGCTGGTCAGCTTCTACAAGAACTTCAGGGTG
ACGCTGCAGGTGACCCCCAAGGGCGGCGCCGCCGCCCCCGCCGCCGACGGCGCGGTGGTG
AGCTGGACCATGGACTTCGACAAGGCCAGCGAGGAGGTGCCCGACCCGGACGTCATCAAG
GAGACCGCCGCCAAGACCTTCCACGACCTCGACGACTACCTCCTCAAGAACTAG

Peptide Sequence

PEP ID

Os04t0465600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:23278475:23279374:1 gene:Os04g0465600 transcript:Os04t0465600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os04t0465600-01)
Sequence

MASKVELVVEVKSPADKLWTALRDSTELFPKIFPEQYKSIETVEGDGKSAGTVRLLKYTE
GVPMVTFAKEKVEVADDEKKVVSYSVVDGELVSFYKNFRVTLQVTPKGGAAAPAADGAVV
SWTMDFDKASEEVPDPDVIKETAAKTFHDLDDYLLKN

Transcript Sequence

Transcript ID

Os04t0465600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:23278475:23279374:1 gene:Os04g0465600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os04t0465600-01)
Sequence

AACAAAGAACTCAAGAAGCAATTAACATTCGCATTCATCAGCTGGTAGGTAGTGTGAGCT
AGAGATTAAGGGAGAGAGAGAGATCATGGCGTCCAAGGTTGAGCTGGTGGTGGAGGTGAA
GTCGCCGGCGGACAAGCTGTGGACGGCGCTGCGCGACTCGACGGAGCTGTTCCCCAAGAT
CTTCCCCGAGCAGTACAAGAGCATCGAGACCGTCGAGGGCGACGGCAAGTCCGCCGGCAC
CGTCCGCCTCCTCAAGTACACCGAAGGGGTGCCGATGGTGACGTTCGCGAAGGAGAAGGT
GGAGGTGGCGGACGACGAGAAGAAGGTGGTGTCGTACAGCGTGGTGGACGGCGAGCTGGT
CAGCTTCTACAAGAACTTCAGGGTGACGCTGCAGGTGACCCCCAAGGGCGGCGCCGCCGC
CCCCGCCGCCGACGGCGCGGTGGTGAGCTGGACCATGGACTTCGACAAGGCCAGCGAGGA
GGTGCCCGACCCGGACGTCATCAAGGAGACCGCCGCCAAGACCTTCCACGACCTCGACGA
CTACCTCCTCAAGAACTAGCCAGACAGCCAGATCGAGCGCCGCCGTGCGGGTGCGTGGCT
TATGTGTTAGAGTCCACTATAGCGTCCTCGCCGTCAGTCGTCGTCGCACACGGTCGCAGT
ATCGGGGTGTTGCATTTGCTAGCTCTCCGGCTAGCCACTGTCTCCCACGAATTAGTGTAC
GTATCGGTGCATGAGTGAATAATAAAGTGTTCAGGTT