Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0465000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23228941:23234936:1 gene:Os04g0465000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif SAM domain containing protein. (Os04t0465000-01);Similar to OSIGBa0130P02.4 protein. (Os04t0465000-02)
Sequence	ATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCTCGGCCGCAGCGGT CAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGGTGTGCACTTAGGA AGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTCTGAGTCGTATGAT GGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCAGCATGGAGATAAT GATTGCCAGGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAAAGGCTTGTCTAGC AATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTCCAGGAAACCTAAG AATATACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTCTAGATATGACGGA AGAGATAAAATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAGGCTCCCTGAGCCA AGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGATGATCTGTTGAAG TTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAGGCACAGGTCCCCT GAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATATGATCATATTCGT TCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCTCATCACTAGAGAC GCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCATTTCTATTGATACA ACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTACAGCTCCTGTGATG CCAGAAGTACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACTTGAGAAGTATGTC TTCCTCTTCCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGATGGGAGACAGTGAC CTGAAGGAAATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCAGGCAGTGGCACCT TATTCAAAACGGCGTAGATGA

Peptide Sequence

PEP ID	Os04t0465000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23228941:23234936:1 gene:Os04g0465000 transcript:Os04t0465000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif SAM domain containing protein. (Os04t0465000-01);Similar to OSIGBa0130P02.4 protein. (Os04t0465000-02)
Sequence	MASSASSSRHQVTITLGRSGQVVKRRAVSDIDNDDGVHLGRKRSVRDRLGNNMVGSESYD GQQRNKRRQIETNGLQHGDNDCQVGRDDLRLKLMKKGLSSNGGAEQNGVDLREKLSRKPK NIRRYDARGHVPESRSRYDGRDKIPELRSRYGMRERLPEPRTSALPSRIPSARSMDDLLK LDSSREAYSSWSGNLRHRSPEKLKSARRDMSPSRTYDHIRSMPPIRSAGTSRTSGLITRD APDALRTQPYAGKSTISIDTTQPANGVASSATVMPTAPVMPEVPLTVTGLLNSLGLEKYV FLFHAEEVDMAALSQMGDSDLKEIGVPMGPRKKILQAVAPYSKRRR

Transcript Sequence

Transcript ID	Os04t0465000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23228941:23234936:1 gene:Os04g0465000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif SAM domain containing protein. (Os04t0465000-01);Similar to OSIGBa0130P02.4 protein. (Os04t0465000-02)
Sequence	ACCAAAGCGAGTCCCTCCCCCTCCCGTCTCGAGCGCCGGTAAACTCCACGCCTCCAATCG GCCAATCGCCAATTCGCAATCCATTCCCCCCGAAACCCTAACCGGCGCCTCTCCTCCACG CGCCGCGCCGCCTCCCGCTCCTCCCTCCCAGCAGCGCCGCCGTCGTCGTCCCTCTCACCG GCGGGTGGCGGCGATGGCCTCCTCGGCGTCGTCATCCAGGCACCAGGTCACCATCACCCT CGGCCGCAGCGGTCAGGTTGTCAAAAGGCGAGCTGTATCTGACATTGATAATGATGATGG TGTGCACTTAGGAAGAAAACGATCTGTGAGGGACAGACTAGGAAATAATATGGTTGGTTC TGAGTCGTATGATGGCCAGCAGCGTAACAAAAGACGACAGATAGAAACCAATGGTTTGCA GCATGGAGATAATGATTGCCAGGTCGGTAGGGATGATTTGAGATTGAAGCTTATGAAGAA AGGCTTGTCTAGCAATGGTGGTGCAGAACAGAATGGAGTGGATCTCCGTGAAAAGCTTTC CAGGAAACCTAAGAATATACGGAGGTATGATGCAAGAGGACATGTTCCAGAATCAAGGTC TAGATATGACGGAAGAGATAAAATTCCAGAATTAAGGTCAAGATATGGCATGAGAGAGAG GCTCCCTGAGCCAAGGACATCTGCTCTTCCTAGTCGAATTCCTTCTGCAAGAAGCATGGA TGATCTGTTGAAGTTGGACTCTTCAAGAGAAGCTTATTCCTCGTGGTCTGGTAATTTGAG GCACAGGTCCCCTGAAAAACTTAAAAGTGCTCGCAGAGATATGTCTCCCTCAAGAACATA TGATCATATTCGTTCCATGCCACCCATTAGATCTGCTGGTACCTCAAGGACTTCAGGTCT CATCACTAGAGACGCTCCTGATGCATTAAGAACTCAACCTTATGCTGGCAAGTCTACCAT TTCTATTGATACAACTCAGCCAGCAAATGGAGTTGCTTCATCTGCTACAGTGATGCCTAC AGCTCCTGTGATGCCAGAAGTACCGCTAACAGTTACTGGGTTGCTGAATTCACTAGGACT TGAGAAGTATGTCTTCCTCTTCCATGCTGAAGAGGTGGATATGGCTGCATTGAGTCAGAT GGGAGACAGTGACCTGAAGGAAATAGGGGTACCAATGGGTCCTAGAAAGAAGATTCTCCA GGCAGTGGCACCTTATTCAAAACGGCGTAGATGAACAGCATGCTCAGGAACTTGGGGCGT TCGTGGGCAATGACAATTTATTGGTGTAAGCTGCTTCATTGCAGATCTTGTATATCCCAA TGGTCTAGTGCTCTAGTCAATCCGTTTCATTGCTGATAGATCAACGCATCGCTTTTCTTG GCATGCATAATCTTATCTGTCAGCTGATGATCCCAATCCTGTTATTCACGACCTGCCCCT TGTGTAGCAGGATCTGAAACATGGATATGTAGCTTTGCTACACTAACCAGTCAGTTTTTT CTTCCTCTTTGGGAATTGGGAACATCGATGACCTGTAATCGAAATCCCATGCTTTATGAC CTTGGGAGCGTTGGCAATTGAGTTTACTGGAACATACTAGTGTTAAGATTGTGTACAGAA TGCG