Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0464200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23171516:23176332:-1 gene:Os04g0464200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETAINE ALDEHYDE DEHYDROGENASE 1 description:Betaine aldehyde dehydrogenase, Rice fragrance, Salt stress (Os04t0464200-01)
Sequence	ATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAG CCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGAC ATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTC GGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTC AAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTT GATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTT GAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTA CCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATTGGGGTTGTTGGACTTATC ACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCT GGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGT GGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGC ACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGA AGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCG TTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCT GTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCT CGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGGGCA AAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGT GAAGGGCAGTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACA ATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACT ATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTC ATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCAC TATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAG GCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCA TGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAAC TACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGG CCTCCATCCAAGCTGTAG

Peptide Sequence

PEP ID	Os04t0464200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23171516:23176332:-1 gene:Os04g0464200 transcript:Os04t0464200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETAINE ALDEHYDE DEHYDROGENASE 1 description:Betaine aldehyde dehydrogenase, Rice fragrance, Salt stress (Os04t0464200-01)
Sequence	MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAF GRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACF EYYADLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAA GCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTG STETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAGQVCSATS RLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCRLGSVVSEGQYQKIMKFISTARCEGAT ILYGGARPQHLKRGFFIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTH YGLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDN YLSVKQVTKYCSDEPYGWYRPPSKL

Transcript Sequence

Transcript ID	Os04t0464200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23171516:23176332:-1 gene:Os04g0464200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETAINE ALDEHYDE DEHYDROGENASE 1 description:Betaine aldehyde dehydrogenase, Rice fragrance, Salt stress (Os04t0464200-01)
Sequence	GGTGAGAGAGAGTGCTCGTCGTCGATCGCCCAAGGTCCGGGACAACCCAAAAGGCCGCGG CGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGC GCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCT CGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGC GGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGA CGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGAT CGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGG GAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTA TGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGA AAATTTTGAGTCCTATGTACTCAAAGAACCCATTGGGGTTGTTGGACTTATCACTCCCTG GAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTAC AGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATG TGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGC TGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGA AACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCT TGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTG GGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACT TTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGGGCAAAGAGTAT CAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCA GTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATA TGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAAC AAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGT TAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCT AGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCA GTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGG GAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAG CGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATC CAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAA GATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGT CTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTC ATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCAT TTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAAATGCAAAATG