Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0462900-05
CDS Infomation	cds chromosome:IRGSP-1.0:4:23116705:23117883:-1 gene:Os04g0462900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prohibitin2. (Os04t0462900-01);Similar to Prohibitin. (Os04t0462900-02);Similar to prohibitin2. (Os04t0462900-05);Similar to prohibitin2. (Os04t0462900-06)
Sequence	ATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGG CTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGC GCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCAC TTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAAC TTCTCCTCCAACTCCGGCACCAAAGGACCCTGCAGATGGGTTTACCCTCACCCTTCCGGC CTCCTTTCCCCGCCCCCGACGTCCGTGCCCTTCCCCACCATCTTCACCTCCCTCGGCCTC GAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCG CAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGAC GCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCAC CTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAG GCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTG CGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGG ACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCC CGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTC AACGCTGCCGGGTTCGGCCGGTGA

Peptide Sequence

PEP ID	Os04t0462900-05
PEP Infomation	pep chromosome:IRGSP-1.0:4:23116705:23117883:-1 gene:Os04g0462900 transcript:Os04t0462900-05 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prohibitin2. (Os04t0462900-01);Similar to Prohibitin. (Os04t0462900-02);Similar to prohibitin2. (Os04t0462900-05);Similar to prohibitin2. (Os04t0462900-06)
Sequence	MAGGPAAVSFLTNIAKAAAGLGAAASLLSASLYTVDGGERAVIFDRFRGVLPETVGEGTH FLVPWLQKPFVFDIRTRPHNFSSNSGTKGPCRWVYPHPSGLLSPPPTSVPFPTIFTSLGL EYDDKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRDALIRRAREFNIILDDVAITH LSYGIEFSQAVEKKQVAQQEAERSKFLVAKAEQERRAAIVRAEGESESARLISEATAAAG TGLIELRRIEAAREIAAELARSPNVAYVPAGDNGRMLLGLNAAGFGR

Transcript Sequence

Transcript ID	Os04t0462900-05
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23116705:23117883:-1 gene:Os04g0462900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to prohibitin2. (Os04t0462900-01);Similar to Prohibitin. (Os04t0462900-02);Similar to prohibitin2. (Os04t0462900-05);Similar to prohibitin2. (Os04t0462900-06)
Sequence	CTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAG AGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGG CGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCG GCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGG GGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCC CCCACAACTTCTCCTCCAACTCCGGCACCAAAGGACCCTGCAGATGGGTTTACCCTCACC CTTCCGGCCTCCTTTCCCCGCCCCCGACGTCCGTGCCCTTCCCCACCATCTTCACCTCCC TCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCG TCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCG TCCGCGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCA TCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGC AGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGG CCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCG CCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCG AGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGC TCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGT TGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTA TCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGT GATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAA GCTTTATGTTGCTGTTCAATACGCATGCTAGTTATGCTT