Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0461800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:23078330:23081438:-1 gene:Os04g0461800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEEP WATER TOLERANCE 2 description:Actin-binding FH2 domain containing protein. (Os04t0461800-01)
Sequence	ATGTCCAGTTCAGCCAGAGGAATCACCCTCCTCTGCCTCCTCTTGATCGTGTCATCCACT GTTCTCCACTTCTCGATCGGCGGCGGCAGCAATGGCGAGAAGAGGAGAGACGATGGTGAT GGTGACGGTGACGATGAGAAGGTGAGGTTGTTGCTTGGTGCCAACGCTCTGGGCGAGCGG GATAGGCGGCATGGGCATGGGCATGGAGGTGGTGTCTCTTCGGCGCCGGCGCCGGCTCCG GCTCCGGCTCGTGCCCACCTGCCGCCGCCGCTGCTGCACAAGAACGCGCGGCTCCCGGAC CCGGTGCCCGGTAGAGTCGGGCTCGGGCACAGGAGGGGGAACGCCACCGCGGCGCACAGA CGGCGCAGCGAGCGGGAAGGGAAGAAGAGCACGCCGCTTGTCGTGGTCGCCGCGGGCGCC GCGCTGTCCGGCGCGGCGGCGGTGCTCCTCGTCGTCCTCGTGGTGTTCCTGGCGTGCAGG AGGTTCCAGAGGAGGGCCATGCCGGGCGCTGACCAGAGCGGGACAAACAAGGTGAGCTTC GATCCTGGCCCCGACGTGTTCTACCTGGACGCCGTCAAGCCGTACGTCGAGGCCGACCAT GGCGGCGGCGGCGGTGTTGTGAAGACGGCGCCGGAGTTGGCCGGGCCGAAGGAAGAGCCC AGGTGCGAGGAGGAGGACAGCGGAGTTGCCCTGTCCGACGACGGCGCCGACTCCGTCCAT TCCTCGTGCTGCTTCCACTCGTCGCACTTCTCCTACTCCGAGCTCCGGGACACGAAGCCG GGGAGCAATGGCGTGTCGCCATCGCCATCCGGCCGGTCAAGACGACGGAGCTCCGCCCCT GTGACGCCCTCAGAGAAGAACAAGGCTGCGAGCCCTTATTCGCCGCAGTGCCCGCGCACG CCGAGCAACAGGGAGCGATCGTCTCGCGCCCACTCCCCGAGCTCGTCGGTTTCGGACTTG ACATCGGTGTCGACATCGGTGGTCAAGGATCATGAAGTCCGGCGAGCCGTCCATTCCCTG ATGTTTCCAGAAGCGCAGAGCGGCGGCGCGGGGCACGTGAAGGAAGACGAGGCAGAATCA GGCAATATGAGGCCGCCTCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCCGCCGGCAGTA ACACAGCAGCAGGATGTCAAGACAAGCTGTGGACCGGCCGTTCCCCCACCGCCACCGCCT ACGCCTCCGCCGCCACCGCCACTGCTCGCACCGAAACAGCAGAGCAGCGGCGGCCCGATC CTCCCGCCGGCGCCCGCGCCGCCTCCTCTGTTCAGGCCGTGGGCGCCGGCGGTCGGGAAG AACGGCGCGCCGCTGCCGAAGCTGAAGCCGCTGCACTGGGACAAGGTGCGCGCCGCGCCC AACCGGCGGATGGTGTGGGACAGGATCCGATCGAGCTCGTTCGAGCTGGACGAGAAGATG ATCGAGTCGCTGTTCGGGTACAACGCGAGGTGTTCGACGAAGCACGAGGAGGTGCAGAGC CGGAGCCCCTCGCTCGGCCACCACGTCCTCGACACCAAGAGGCTGCAGAACTTCACCATC CTGATGAAGGCCGTCAGCGCCACCGCCGAGCAGATCTTCGCCGCCCTGCTGCACGGGAAC GGCCTGTCGGCGCAGCAGCTGGAGGCGCTCATCAAGATGGCGCCGGCCAAGGACGAGGCC GACAAGCTGTCCGCCTACGACGGCGACGTCGACGGCCTCGTCCCGGCGGAGAGGCTGCTC AAGGTGGTGCTCACGATACCGTGCGCGTTCGCGCGAGTGGAGGCGATGCTGTACCGGGAG ACCTTCGCCGACGAGGTCGGCCACATCAGGAAGTCGTTCGAGATGCTCGAGGAGGCGTGC AGGGAGCTGATGTCCAGCAAGCTGTTCCTGAAGCTGCTGGAGGCCGTGCTCAAGACCGGG AACCGGATGAACGTCGGGACTGCCCGCGGCGGCGCCATGGCGTTCAAGCTCGACGCGCTG CTCAAGCTCGCCGACGTCAAGGGCACCGACGGGAAGACCACGCTGCTGCACTTCGTGGTG CAGGAGATGACCCGGTCGCGCGCCGCCGAGGCGGCGGACATCGCCGCGGGGCTCGGCGCC GAGCTCACCAACGTCAGGAAGACGGCGACCGTGGACCTGGACGTGCTCACCACCTCGGTG TCCGGCCTGTCGCACGGCCTGTCCCGGATCAAGGAGCTGGTCGGGAGCGACCTGTCCGGC GACGAGAGGAACCAGTGCTTCGTGGCGTTCATGGCGCCGTTCGTCGCCCACGCCGGTGAG GTGATCCGGGAGCTGGAGGACGGCGAGCGGCGGGTGCTGGCGCACGTCAGGGAGATCACC GAGTACTACCATGGCGACGTCGGCAAGGACGAGGCGAGCCCGCTCAGGATCTTCGTCATC GTCAGGGACTTCCTGGGGATGCTGGAGAGGGTGTGCAAGGAGGTGAGGGGAGCCAAGAAT TGCCATGGCGGGAATCCTGCCCTGAACCTGAACAATGTATGA

Peptide Sequence

PEP ID	Os04t0461800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:23078330:23081438:-1 gene:Os04g0461800 transcript:Os04t0461800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEEP WATER TOLERANCE 2 description:Actin-binding FH2 domain containing protein. (Os04t0461800-01)
Sequence	MSSSARGITLLCLLLIVSSTVLHFSIGGGSNGEKRRDDGDGDGDDEKVRLLLGANALGER DRRHGHGHGGGVSSAPAPAPAPARAHLPPPLLHKNARLPDPVPGRVGLGHRRGNATAAHR RRSEREGKKSTPLVVVAAGAALSGAAAVLLVVLVVFLACRRFQRRAMPGADQSGTNKVSF DPGPDVFYLDAVKPYVEADHGGGGGVVKTAPELAGPKEEPRCEEEDSGVALSDDGADSVH SSCCFHSSHFSYSELRDTKPGSNGVSPSPSGRSRRRSSAPVTPSEKNKAASPYSPQCPRT PSNRERSSRAHSPSSSVSDLTSVSTSVVKDHEVRRAVHSLMFPEAQSGGAGHVKEDEAES GNMRPPPPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPPPLLAPKQQSSGGPI LPPAPAPPPLFRPWAPAVGKNGAPLPKLKPLHWDKVRAAPNRRMVWDRIRSSSFELDEKM IESLFGYNARCSTKHEEVQSRSPSLGHHVLDTKRLQNFTILMKAVSATAEQIFAALLHGN GLSAQQLEALIKMAPAKDEADKLSAYDGDVDGLVPAERLLKVVLTIPCAFARVEAMLYRE TFADEVGHIRKSFEMLEEACRELMSSKLFLKLLEAVLKTGNRMNVGTARGGAMAFKLDAL LKLADVKGTDGKTTLLHFVVQEMTRSRAAEAADIAAGLGAELTNVRKTATVDLDVLTTSV SGLSHGLSRIKELVGSDLSGDERNQCFVAFMAPFVAHAGEVIRELEDGERRVLAHVREIT EYYHGDVGKDEASPLRIFVIVRDFLGMLERVCKEVRGAKNCHGGNPALNLNNV

Transcript Sequence

Transcript ID	Os04t0461800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:23078330:23081438:-1 gene:Os04g0461800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEEP WATER TOLERANCE 2 description:Actin-binding FH2 domain containing protein. (Os04t0461800-01)
Sequence	CTCCCACGTCCTCTCTCTCCCTGACCCTGAGCCAAAGAATCTCTCCATCCTCCATCCTTG AAATGGTTTGATGCCTGCAGGCATCAGCCATGTCCAGTTCAGCCAGAGGAATCACCCTCC TCTGCCTCCTCTTGATCGTGTCATCCACTGTTCTCCACTTCTCGATCGGCGGCGGCAGCA ATGGCGAGAAGAGGAGAGACGATGGTGATGGTGACGGTGACGATGAGAAGGTGAGGTTGT TGCTTGGTGCCAACGCTCTGGGCGAGCGGGATAGGCGGCATGGGCATGGGCATGGAGGTG GTGTCTCTTCGGCGCCGGCGCCGGCTCCGGCTCCGGCTCGTGCCCACCTGCCGCCGCCGC TGCTGCACAAGAACGCGCGGCTCCCGGACCCGGTGCCCGGTAGAGTCGGGCTCGGGCACA GGAGGGGGAACGCCACCGCGGCGCACAGACGGCGCAGCGAGCGGGAAGGGAAGAAGAGCA CGCCGCTTGTCGTGGTCGCCGCGGGCGCCGCGCTGTCCGGCGCGGCGGCGGTGCTCCTCG TCGTCCTCGTGGTGTTCCTGGCGTGCAGGAGGTTCCAGAGGAGGGCCATGCCGGGCGCTG ACCAGAGCGGGACAAACAAGGTGAGCTTCGATCCTGGCCCCGACGTGTTCTACCTGGACG CCGTCAAGCCGTACGTCGAGGCCGACCATGGCGGCGGCGGCGGTGTTGTGAAGACGGCGC CGGAGTTGGCCGGGCCGAAGGAAGAGCCCAGGTGCGAGGAGGAGGACAGCGGAGTTGCCC TGTCCGACGACGGCGCCGACTCCGTCCATTCCTCGTGCTGCTTCCACTCGTCGCACTTCT CCTACTCCGAGCTCCGGGACACGAAGCCGGGGAGCAATGGCGTGTCGCCATCGCCATCCG GCCGGTCAAGACGACGGAGCTCCGCCCCTGTGACGCCCTCAGAGAAGAACAAGGCTGCGA GCCCTTATTCGCCGCAGTGCCCGCGCACGCCGAGCAACAGGGAGCGATCGTCTCGCGCCC ACTCCCCGAGCTCGTCGGTTTCGGACTTGACATCGGTGTCGACATCGGTGGTCAAGGATC ATGAAGTCCGGCGAGCCGTCCATTCCCTGATGTTTCCAGAAGCGCAGAGCGGCGGCGCGG GGCACGTGAAGGAAGACGAGGCAGAATCAGGCAATATGAGGCCGCCTCCTCCTCCTCCTC CGCCGCCGCCGCCACCGCCGCCGGCAGTAACACAGCAGCAGGATGTCAAGACAAGCTGTG GACCGGCCGTTCCCCCACCGCCACCGCCTACGCCTCCGCCGCCACCGCCACTGCTCGCAC CGAAACAGCAGAGCAGCGGCGGCCCGATCCTCCCGCCGGCGCCCGCGCCGCCTCCTCTGT TCAGGCCGTGGGCGCCGGCGGTCGGGAAGAACGGCGCGCCGCTGCCGAAGCTGAAGCCGC TGCACTGGGACAAGGTGCGCGCCGCGCCCAACCGGCGGATGGTGTGGGACAGGATCCGAT CGAGCTCGTTCGAGCTGGACGAGAAGATGATCGAGTCGCTGTTCGGGTACAACGCGAGGT GTTCGACGAAGCACGAGGAGGTGCAGAGCCGGAGCCCCTCGCTCGGCCACCACGTCCTCG ACACCAAGAGGCTGCAGAACTTCACCATCCTGATGAAGGCCGTCAGCGCCACCGCCGAGC AGATCTTCGCCGCCCTGCTGCACGGGAACGGCCTGTCGGCGCAGCAGCTGGAGGCGCTCA TCAAGATGGCGCCGGCCAAGGACGAGGCCGACAAGCTGTCCGCCTACGACGGCGACGTCG ACGGCCTCGTCCCGGCGGAGAGGCTGCTCAAGGTGGTGCTCACGATACCGTGCGCGTTCG CGCGAGTGGAGGCGATGCTGTACCGGGAGACCTTCGCCGACGAGGTCGGCCACATCAGGA AGTCGTTCGAGATGCTCGAGGAGGCGTGCAGGGAGCTGATGTCCAGCAAGCTGTTCCTGA AGCTGCTGGAGGCCGTGCTCAAGACCGGGAACCGGATGAACGTCGGGACTGCCCGCGGCG GCGCCATGGCGTTCAAGCTCGACGCGCTGCTCAAGCTCGCCGACGTCAAGGGCACCGACG GGAAGACCACGCTGCTGCACTTCGTGGTGCAGGAGATGACCCGGTCGCGCGCCGCCGAGG CGGCGGACATCGCCGCGGGGCTCGGCGCCGAGCTCACCAACGTCAGGAAGACGGCGACCG TGGACCTGGACGTGCTCACCACCTCGGTGTCCGGCCTGTCGCACGGCCTGTCCCGGATCA AGGAGCTGGTCGGGAGCGACCTGTCCGGCGACGAGAGGAACCAGTGCTTCGTGGCGTTCA TGGCGCCGTTCGTCGCCCACGCCGGTGAGGTGATCCGGGAGCTGGAGGACGGCGAGCGGC GGGTGCTGGCGCACGTCAGGGAGATCACCGAGTACTACCATGGCGACGTCGGCAAGGACG AGGCGAGCCCGCTCAGGATCTTCGTCATCGTCAGGGACTTCCTGGGGATGCTGGAGAGGG TGTGCAAGGAGGTGAGGGGAGCCAAGAATTGCCATGGCGGGAATCCTGCCCTGAACCTGA ACAATGTATGATACCGCAAATATTGGGGTGAAAGAACAACATTGTAATTCTTGGCTTCGG ATTGTTCTTGACATGATCTTGCCAGATTAGAACAGATCAGTTCGTTTAGATTACAAGCAT CCAGCTCTTCATCTATCCGAAGTTCCGATGTGCATTGCACAATCATGC