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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0461100-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:23028506:23028940:1 gene:Os04g0461100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein, PSRP-3/Ycf65 domain containing protein. (Os04t0461100-01);Similar to H0219H12.12 protein. (Os04t0461100-02)
Sequence

AAGGTTAAGGTGCCTGAAAGGCAGGATCCAATGCTTGTTCTGAAGTTCATATGGATGGAG
AAGAACATTGGCATAGCCCTCGACCAGTTGGTTCCCGGCTATGGCAGCATTCCGTTAAGC
CCATACTACTTCTGGCCACGGAAAGATGCCTGGGAGGAGCTAAGAGCAAAGCTGGAGGAG
AAAGAGTGGATCTCTCAGAAACAGATGATCATCCTTCTGAATCAGGCCACTGATATCATC
AACCTTTGGCAACAGGGTGGTGGCAGCTTGTCAACCTAA

Peptide Sequence

PEP ID

Os04t0461100-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:23028506:23028940:1 gene:Os04g0461100 transcript:Os04t0461100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein, PSRP-3/Ycf65 domain containing protein. (Os04t0461100-01);Similar to H0219H12.12 protein. (Os04t0461100-02)
Sequence

KVKVPERQDPMLVLKFIWMEKNIGIALDQLVPGYGSIPLSPYYFWPRKDAWEELRAKLEE
KEWISQKQMIILLNQATDIINLWQQGGGSLST

Transcript Sequence

Transcript ID

Os04t0461100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:23028506:23028940:1 gene:Os04g0461100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein, PSRP-3/Ycf65 domain containing protein. (Os04t0461100-01);Similar to H0219H12.12 protein. (Os04t0461100-02)
Sequence

ACAAGGTTAAGGTGCCTGAAAGGCAGGATCCAATGCTTGTTCTGAAGTTCATATGGATGG
AGAAGAACATTGGCATAGCCCTCGACCAGTTGGTTCCCGGCTATGGCAGCATTCCGTTAA
GCCCATACTACTTCTGGCCACGGAAAGATGCCTGGGAGGAGCTAAGAGCAAAGCTGGAGG
AGAAAGAGTGGATCTCTCAGAAACAGATGATCATCCTTCTGAATCAGGCCACTGATATCA
TCAACCTTTGGCAACAGGGTGGTGGCAGCTTGTCAACCTAAGAGGATATCTCAATTCTCC
CATCCTTGAGAACCTTGTTTCTTTTTTTCTTGCTTTGGTTACACGGATCTTTGTTGTTAC
ATGACCCTGTAGATCGATTCAAACTGTTTTCGGATACGGTTTTGTTTATGGAAATGAATT
GTGATTGATCTCTGT