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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0460500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:22986591:22988088:1 gene:Os04g0460500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.9 protein. (Os04t0460500-00)
Sequence

ATGTCAGTCCTTCGCTCCATTCTCCCGACAGTAGCAAGAAACAATGGTTGGAGATGCTTT
GCTACTGGGTTTCCTTCCGATACTATAGCAGAGCTCAATAAGGAAATGGAATCTGTGTTT
GGTGAATCTCCTTCACCCAGTCCTTTAGGTTCAACTCCTCAGCAACCAGCAAGGCCCACT
AATGGATCAGGGGATGGACAACCAATGCTTACCCATACTGATAGCAGTGGCCAGGCAAAG
ATGGTTGATGTCTCATCCAAGCATGACAGCACAAGAGTTGCTATAGCCACATGCAGGGTC
TTGCTAGGCCAGGAGGCATTTGATTTGGTAGCATCAAACAAGATTGCCAAAGGAGATGTT
CTAACTGTTGCAAAGATTGCTGGAATAACTGGTGCAAAGCAAACCAGCAACCTCATACCG
CTGTGCCACAACCTTAATCTATCCCATGTTCGTGTTGATCTTACTCTTAACGAAGAAGAT
TCTAGTGTTATGATAGAAGGAGAAGCTTCAACCAGTGGCAAGACAGGGGTTGAGATGGAA
GCAATGACAGCAGTTGCCATTGCTGGTCTCACAGTCTATGACATGTGCAAAGCTGCTTCA
AAGAACATATGCATAACAGATATCTGTCTCCAGCACAAATCTGGTGGAAAGAGTGGAAGC
TGGTCCAGAAGTTAG

Peptide Sequence

PEP ID

Os04t0460500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:22986591:22988088:1 gene:Os04g0460500 transcript:Os04t0460500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.9 protein. (Os04t0460500-00)
Sequence

MSVLRSILPTVARNNGWRCFATGFPSDTIAELNKEMESVFGESPSPSPLGSTPQQPARPT
NGSGDGQPMLTHTDSSGQAKMVDVSSKHDSTRVAIATCRVLLGQEAFDLVASNKIAKGDV
LTVAKIAGITGAKQTSNLIPLCHNLNLSHVRVDLTLNEEDSSVMIEGEASTSGKTGVEME
AMTAVAIAGLTVYDMCKAASKNICITDICLQHKSGGKSGSWSRS

Transcript Sequence

Transcript ID

Os04t0460500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22986591:22988088:1 gene:Os04g0460500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.9 protein. (Os04t0460500-00)
Sequence

TGCAGAAGCATAACAGCAGTCTAGCTTGACAACAATGTCAGTCCTTCGCTCCATTCTCCC
GACAGTAGCAAGAAACAATGGTTGGAGATGCTTTGCTACTGGGTTTCCTTCCGATACTAT
AGCAGAGCTCAATAAGGAAATGGAATCTGTGTTTGGTGAATCTCCTTCACCCAGTCCTTT
AGGTTCAACTCCTCAGCAACCAGCAAGGCCCACTAATGGATCAGGGGATGGACAACCAAT
GCTTACCCATACTGATAGCAGTGGCCAGGCAAAGATGGTTGATGTCTCATCCAAGCATGA
CAGCACAAGAGTTGCTATAGCCACATGCAGGGTCTTGCTAGGCCAGGAGGCATTTGATTT
GGTAGCATCAAACAAGATTGCCAAAGGAGATGTTCTAACTGTTGCAAAGATTGCTGGAAT
AACTGGTGCAAAGCAAACCAGCAACCTCATACCGCTGTGCCACAACCTTAATCTATCCCA
TGTTCGTGTTGATCTTACTCTTAACGAAGAAGATTCTAGTGTTATGATAGAAGGAGAAGC
TTCAACCAGTGGCAAGACAGGGGTTGAGATGGAAGCAATGACAGCAGTTGCCATTGCTGG
TCTCACAGTCTATGACATGTGCAAAGCTGCTTCAAAGAACATATGCATAACAGATATCTG
TCTCCAGCACAAATCTGGTGGAAAGAGTGGAAGCTGGTCCAGAAGTTAG