Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0459800-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:22947880:22951864:-1 gene:Os04g0459800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.4 protein. (Os04t0459800-01);DEAD-like helicase, N-terminal domain containing protein. (Os04t0459800-02)
Sequence	ATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCCGCTCCACATCCTCTCAACAC CACCGGCGCATCCTCCTCCTCCCGGCCGACGACGCGCACGCCCTCCTCCTCCCGGCCTTC GCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGAAGCACGAGTCTGTCATGGCC GCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCGCCCGCGCCATGCGCCGGCGG GTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGCACAACGCGCTCACCCGCTTC GCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCCGGCTCCTCGCCATGGAGGTCTTC GACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCACTGGACAGGAGATCAAGGAG GTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGCTCTCCACGGAGGAGCCCTAC GAGGTTGCAGTGGTTGATGAGATACAGATGATGGCTGACCCTGTCAGGGGCTATGCGTGG ACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATCTCTGTGGTGACCCTAGTGTT CTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATGATTTGGAGGTGCATCAATAT GAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGCTTGGAGACCTCAAGAATGTG CGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGATATTTGAGGTGAAACTGGCA ATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATGGAGCTCTTCCACCAGAGACA CGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATGAGTATGATGTGCTTGTAGCA AGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGAGAGTGGTATTCTATAGTTTG GCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTTCACAGGTAAAACAGATTGCT GGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGCTGACAACCACCTTCTTGTTG GATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCATTTGAGGAAGCGAAGAAAGTT GGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCATCCAGTTTCCTGACCTTACC TTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCGTCGACAGTACATACTTCATG TGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTGAGAGGATCCAGGGTCTCTCC CTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATATAAGGGATCCAAAAGCCATG TACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCCGTCGTGTTAGCATTGCAATG GGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTCTGGACCTTGAGACAAAACAT CAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTGAGGAAGATCATTTTCCTCAT GTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATTTACTTGCTAAGTCACTTGCC AAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAACCAAGACGAGAAAATGAAGAA GACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGAATGATTCAGAAGATGGTTAT GAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAAGGCTGGATAGACCTAGTCAG GACCCTTCTTCCTTGAACTTTGTGGCATGA

Peptide Sequence

PEP ID	Os04t0459800-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:22947880:22951864:-1 gene:Os04g0459800 transcript:Os04t0459800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.4 protein. (Os04t0459800-01);DEAD-like helicase, N-terminal domain containing protein. (Os04t0459800-02)
Sequence	MAAAAAIAAALLRRSTSSQHHRRILLLPADDAHALLLPAFAEFCVTHLADELRKHESVMA AADLTAPHAWYPFARAMRRRVVYHCGPTNSGKTHNALTRFAAAKSGVYCSPLRLLAMEVF DKVNALGVYCSLRTGQEIKEVPFSNHVACTIEMLSTEEPYEVAVVDEIQMMADPVRGYAW TRAVLGLKADEIHLCGDPSVLKIVRKICADTGDDLEVHQYERFKPLVVEAKTLLGDLKNV RSGDCIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNEYDVLVA SDAVGMGLNLNIRRVVFYSLAKYNGDRMVPVAASQVKQIAGRAGRRGSIYPDGLTTTFLL DDLDYLIQCLQQPFEEAKKVGLFPCFEQVESFAIQFPDLTFNELLDKFRENCRVDSTYFM CHQESIKKVANMLERIQGLSLKDRYNFCFAPVNIRDPKAMYHLLRFATNYSQSRRVSIAM GMPKGSAKNDTELLDLETKHQVLSMYLWLSHHFEEDHFPHVQKAEEMSINIADLLAKSLA KASWKPTSRQQAKPRRENEEDNDVEQASDDNAKNDSEDGYERSISRIKPFMRKRLDRPSQ DPSSLNFVA

Transcript Sequence

Transcript ID	Os04t0459800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22947880:22951864:-1 gene:Os04g0459800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0219H12.4 protein. (Os04t0459800-01);DEAD-like helicase, N-terminal domain containing protein. (Os04t0459800-02)
Sequence	AACCCGACCTACTACCCTCCATGGCCGCCGCCGCCGCCATCGCCGCCGCACTCCTCCGCC GCTCCACATCCTCTCAACACCACCGGCGCATCCTCCTCCTCCCGGCCGACGACGCGCACG CCCTCCTCCTCCCGGCCTTCGCTGAGTTCTGCGTGACCCACCTCGCGGACGAGCTGAGGA AGCACGAGTCTGTCATGGCCGCGGCGGACCTCACGGCGCCGCACGCGTGGTACCCCTTCG CCCGCGCCATGCGCCGGCGGGTGGTGTACCACTGCGGGCCCACCAACAGCGGCAAGACGC ACAACGCGCTCACCCGCTTCGCCGCCGCCAAGTCCGGCGTGTACTGCAGCCCGCTCCGGC TCCTCGCCATGGAGGTCTTCGACAAGGTCAATGCCCTGGGCGTCTACTGCAGCCTCCGCA CTGGACAGGAGATCAAGGAGGTGCCATTCTCCAACCACGTCGCGTGCACGATCGAAATGC TCTCCACGGAGGAGCCCTACGAGGTTGCAGTGGTTGATGAGATACAGATGATGGCTGACC CTGTCAGGGGCTATGCGTGGACACGAGCCGTTCTTGGGCTCAAGGCAGACGAGATACATC TCTGTGGTGACCCTAGTGTTCTGAAGATTGTTCGGAAGATTTGCGCAGATACTGGAGATG ATTTGGAGGTGCATCAATATGAGCGCTTCAAACCGCTTGTTGTTGAAGCAAAGACACTGC TTGGAGACCTCAAGAATGTGCGCTCTGGTGACTGCATTGTCGCGTTTTCACGCAGAGAGA TATTTGAGGTGAAACTGGCAATCGAGAAGTTTACGAAGCACAAGTGTTGCGTTATATATG GAGCTCTTCCACCAGAGACACGGCGGCAGCAAGCAAAGCTGTTTAATGAGCAGGATAATG AGTATGATGTGCTTGTAGCAAGTGATGCTGTTGGTATGGGATTGAACCTCAACATTAGGA GAGTGGTATTCTATAGTTTGGCCAAGTACAATGGGGACAGGATGGTACCTGTTGCTGCTT CACAGGTAAAACAGATTGCTGGGCGAGCTGGTCGGAGAGGCAGTATTTACCCAGATGGGC TGACAACCACCTTCTTGTTGGATGATTTGGATTATTTGATCCAGTGCCTTCAGCAGCCAT TTGAGGAAGCGAAGAAAGTTGGTCTATTCCCTTGCTTTGAGCAGGTGGAAAGTTTTGCCA TCCAGTTTCCTGACCTTACCTTCAATGAACTGCTGGATAAGTTCCGTGAAAATTGCCGCG TCGACAGTACATACTTCATGTGTCACCAGGAAAGTATCAAGAAGGTTGCTAATATGCTTG AGAGGATCCAGGGTCTCTCCCTCAAGGATCGCTACAATTTTTGTTTTGCTCCAGTGAATA TAAGGGATCCAAAAGCCATGTACCATCTTCTGAGATTTGCTACAAACTATAGCCAAAGCC GTCGTGTTAGCATTGCAATGGGAATGCCAAAGGGTTCTGCAAAGAACGACACTGAGCTTC TGGACCTTGAGACAAAACATCAGGTCCTGTCAATGTACTTGTGGTTGTCACACCATTTTG AGGAAGATCATTTTCCTCATGTGCAGAAAGCTGAGGAAATGTCAATAAATATTGCAGATT TACTTGCTAAGTCACTTGCCAAAGCAAGCTGGAAGCCTACATCAAGACAACAAGCAAAAC CAAGACGAGAAAATGAAGAAGACAACGATGTGGAGCAGGCATCAGATGATAATGCAAAGA ATGATTCAGAAGATGGTTATGAAAGGTCAATATCACGTATAAAACCGTTCATGAGGAAAA GGCTGGATAGACCTAGTCAGGACCCTTCTTCCTTGAACTTTGTGGCATGAATTACTTGTG GCCTGGGTGATTAACCCCGACTGATTGCTTCATGAGATCGTGTGTAGCCAAGTCGTTGCA GCCATTTCAACCTCCCAGAACTGGCAGTTCATCTATCAGTTCTGGTGTAGGATGGTTGGT TATGTTGGCTGAAGTTTGGAATTGATCTTATCCTCAAAATGACACTGAAGCCATCCAGAG GTGTAAGCTAGTATGCTTTAGTGGCGCCACGGGATACTTTAACTTCAGTTTTGTAGATTA TTTGCACGAGAAGGATATATCGACATGAATTCATCAGAATTAAGTTATTAGTGTTTTCCT GATATGAACAAGGGAGTAAGGGACTGTGGTAATAAGTTAGCTGGGGGATATACGGTTTTT TTATTGGGTATTCACTTAGCCTTGGATGTAAGGGACTAGAAAGTAAACTTGTTTTGTTTC AGTTCTGTTTGAATCAATGGCAGCGGTATAACCTTCTGCAACGTTCTC