Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0458900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22910423:22912423:-1 gene:Os04g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 14 description:Similar to Pectin methylesterase-like protein. (Os04t0458900-01)
Sequence	ATGGCGCAGAAGTTTCTCCTCGGGGGCGTGGGCGCGATCCTCGTCGTCGCGGTCGTCGTC GGCGTGGTCGCCACCGTCACCCGCTCCGGCAACAAGGCCGGGGACAACTTCACCGTCCCG GGGGAGGCCAACCTCGCCACCTCCGGCAAGTCCGTCGAGTCCCTGTGCGCGCCCACGCTG TACAAGGAGTCGTGCGAGAAGACGCTCACCACGGCCACCAGTGGCACCGAGAACCCCAAG GAGGTGTTCTCTACCGTCGCCAAGTCGGCGCTCGAGTCGATCAAGTCGGCGGTGGAGAAG TCGAAGGCGATCGGCGAAGCCAAGACGAGCGACAGCATGACGGAGAGCGCGCGCGAGGAC TGCAAGGCCCTCCTGGAGGACTCCGTGGACGACCTCAGGGGCATGGTCGAGATGGCCGGC GGCGACGTCAAGGTGCTGTTCAGCCGCTCCGACGACCTCGAGCACTGGCTCACCGGCGTC ATGACATTCATGGACACCTGCGCCGACGGGTTCGCCGACGAGAAGCTCAAGGCCGACATG CACAGTGTGCTGCGCAACGCCAGCGAGCTCAGCAGCAACGCGCTCGCCATCACCAACACC CTCGGCGCCATCTTCAAGAAGCTCGACCTCGACATGTTCAAGGGTGAGAATCCCATTCAC CGGAGCCTCATCGCGGAGCAGGAAACGGTGGGCGGCTTCCCGTCGTGGATGAAGGCGCCC GACAGGAAGCTGCTCGCCTCCGGCGACCGCAACCGGCCGCAGCCCAACGCGGTGGTGGCC CAGGACGGCAGCGGCCAGTTCAAGACCATCCAGGAGGCCGTGAACAGCATGCCCAAGGGC CACCAGGGCCGGTACGTCATCTACGTGAAGGCCGGCCTGTACGACGAGATCGTCATGGTC CCCAAGGACAAGGTGAACATCTTCATGTACGGCGACGGGCCCAAGCGCAGCCGCGTCACC GGCCGCAAGAGCTTCGCCGACGGCATCACCACCATGAAGACCGCCACCTTCTCCGTCGAG GCGGCCGGGTTCATCTGCAAGAACATGGGGTTCCACAACACCGCCGGCGCGGAGCGGCAC CAGGCGGTGGCGCTGCGCATCAACGGCGACCTCGGGGCCTTCTACAACTGCCGGTTCGAC GCGTTCCAGGACACCCTGTACGTGCACGCCCGGCGCCAGTTCTTCCGCAACTGCGTCATC TCCGGCACCATCGACTTCATCTTCGGCAACTCCGCCGCCGTCTTCCAGAACTGCCTCATC ATCACCCGCCGCCCCATGGACAACCAGCAGAACTCGGTGACGGCGCACGGCCGCACCGAC CCCAACATGAAGTCCGGCCTCGTCATCCAGAACTGCCGCCTCGTGCCCGACCAGAAGCTC TTCCCGGACAGGTTCAAGATCCCCTCCTACCTCGGCCGCCCATGGAAGGAGTACTCCCGC CTCGTCATCATGGAGAGCACCATCGCCGACTTCATCAAGCCGGAGGGCTACATGCCATGG AACGGCGAATTCGCGCTCAACACGCTCTACTACGCCGAGTTCAACAACCGCGGCCCCGGC GCCGGCACCAGCAAGCGCGTCAACTGGAAGGGGTTCCGCGTCATCGGCCAGAAGGAGGCC GAGCAGTTCACCGCCGGGCCGTTCGTCGACGGCGGGACCTGGCTCAAGTTCACCGGCACG CCGCACTTCCTCGGCTTCAAGGTCTAA

Peptide Sequence

PEP ID	Os04t0458900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22910423:22912423:-1 gene:Os04g0458900 transcript:Os04t0458900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 14 description:Similar to Pectin methylesterase-like protein. (Os04t0458900-01)
Sequence	MAQKFLLGGVGAILVVAVVVGVVATVTRSGNKAGDNFTVPGEANLATSGKSVESLCAPTL YKESCEKTLTTATSGTENPKEVFSTVAKSALESIKSAVEKSKAIGEAKTSDSMTESARED CKALLEDSVDDLRGMVEMAGGDVKVLFSRSDDLEHWLTGVMTFMDTCADGFADEKLKADM HSVLRNASELSSNALAITNTLGAIFKKLDLDMFKGENPIHRSLIAEQETVGGFPSWMKAP DRKLLASGDRNRPQPNAVVAQDGSGQFKTIQEAVNSMPKGHQGRYVIYVKAGLYDEIVMV PKDKVNIFMYGDGPKRSRVTGRKSFADGITTMKTATFSVEAAGFICKNMGFHNTAGAERH QAVALRINGDLGAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLI ITRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEYSR LVIMESTIADFIKPEGYMPWNGEFALNTLYYAEFNNRGPGAGTSKRVNWKGFRVIGQKEA EQFTAGPFVDGGTWLKFTGTPHFLGFKV

Transcript Sequence

Transcript ID	Os04t0458900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22910423:22912423:-1 gene:Os04g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 14 description:Similar to Pectin methylesterase-like protein. (Os04t0458900-01)
Sequence	AACCTTGCGGGCCAAGATGGCGCAGAAGTTTCTCCTCGGGGGCGTGGGCGCGATCCTCGT CGTCGCGGTCGTCGTCGGCGTGGTCGCCACCGTCACCCGCTCCGGCAACAAGGCCGGGGA CAACTTCACCGTCCCGGGGGAGGCCAACCTCGCCACCTCCGGCAAGTCCGTCGAGTCCCT GTGCGCGCCCACGCTGTACAAGGAGTCGTGCGAGAAGACGCTCACCACGGCCACCAGTGG CACCGAGAACCCCAAGGAGGTGTTCTCTACCGTCGCCAAGTCGGCGCTCGAGTCGATCAA GTCGGCGGTGGAGAAGTCGAAGGCGATCGGCGAAGCCAAGACGAGCGACAGCATGACGGA GAGCGCGCGCGAGGACTGCAAGGCCCTCCTGGAGGACTCCGTGGACGACCTCAGGGGCAT GGTCGAGATGGCCGGCGGCGACGTCAAGGTGCTGTTCAGCCGCTCCGACGACCTCGAGCA CTGGCTCACCGGCGTCATGACATTCATGGACACCTGCGCCGACGGGTTCGCCGACGAGAA GCTCAAGGCCGACATGCACAGTGTGCTGCGCAACGCCAGCGAGCTCAGCAGCAACGCGCT CGCCATCACCAACACCCTCGGCGCCATCTTCAAGAAGCTCGACCTCGACATGTTCAAGGG TGAGAATCCCATTCACCGGAGCCTCATCGCGGAGCAGGAAACGGTGGGCGGCTTCCCGTC GTGGATGAAGGCGCCCGACAGGAAGCTGCTCGCCTCCGGCGACCGCAACCGGCCGCAGCC CAACGCGGTGGTGGCCCAGGACGGCAGCGGCCAGTTCAAGACCATCCAGGAGGCCGTGAA CAGCATGCCCAAGGGCCACCAGGGCCGGTACGTCATCTACGTGAAGGCCGGCCTGTACGA CGAGATCGTCATGGTCCCCAAGGACAAGGTGAACATCTTCATGTACGGCGACGGGCCCAA GCGCAGCCGCGTCACCGGCCGCAAGAGCTTCGCCGACGGCATCACCACCATGAAGACCGC CACCTTCTCCGTCGAGGCGGCCGGGTTCATCTGCAAGAACATGGGGTTCCACAACACCGC CGGCGCGGAGCGGCACCAGGCGGTGGCGCTGCGCATCAACGGCGACCTCGGGGCCTTCTA CAACTGCCGGTTCGACGCGTTCCAGGACACCCTGTACGTGCACGCCCGGCGCCAGTTCTT CCGCAACTGCGTCATCTCCGGCACCATCGACTTCATCTTCGGCAACTCCGCCGCCGTCTT CCAGAACTGCCTCATCATCACCCGCCGCCCCATGGACAACCAGCAGAACTCGGTGACGGC GCACGGCCGCACCGACCCCAACATGAAGTCCGGCCTCGTCATCCAGAACTGCCGCCTCGT GCCCGACCAGAAGCTCTTCCCGGACAGGTTCAAGATCCCCTCCTACCTCGGCCGCCCATG GAAGGAGTACTCCCGCCTCGTCATCATGGAGAGCACCATCGCCGACTTCATCAAGCCGGA GGGCTACATGCCATGGAACGGCGAATTCGCGCTCAACACGCTCTACTACGCCGAGTTCAA CAACCGCGGCCCCGGCGCCGGCACCAGCAAGCGCGTCAACTGGAAGGGGTTCCGCGTCAT CGGCCAGAAGGAGGCCGAGCAGTTCACCGCCGGGCCGTTCGTCGACGGCGGGACCTGGCT CAAGTTCACCGGCACGCCGCACTTCCTCGGCTTCAAGGTCTAAAGACCCTAGCCCCCTAC ATGGCGTGAAGGGTGGGATCGATGCATGGACGTGTGCATGGGAGATTTGCACGAGAGGAT CCGAGGTGACATTCATGCATGCGTACGTTCGTGTGTGTACCAAATATGTGTGATGGCTGA GACGTGCAGGACACCTGATCAGGGTGGGCGTGCTGCATGCGCTGGGGGGCAGGGCTAACA TTTGTGCTTTTAACTCTTTCCGGTTTCTTTTTTCTCGAACAGATTTTCTTGGAGAATTTC TTCTGTATAAGTATATGTTGC