Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0458200-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:22891020:22892741:1 gene:Os04g0458200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 4 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0458200-01);Similar to cDNA clone:J033037C08, full insert sequence. (Os04t0458200-02)
Sequence	CATTCTTTTACTGTTGTTGATGAAGCCTCAGCATCTCCTTCTGTAAGGAGCATCGGTGGC TACATGCCATCCCTACTCTTTGCTCCACGCTCCGGTTCTTCTGCTGTCAATGAGACCCAC GAAGCAGAAACCCAGGATTCACTAGACCTGACGCACAGCGACAATGATAACACTCAGCAC GTTCAACATCACCTTCAGCTGAGCCCTGAGCCTTCTGCCATGACAGATACTTCATTTGGT GTGAGCTCCGACGTTGTCACGGCAACAACCACATCAGAACAAAGGAATCATCCCCGGCAT CCCAAGAAGTGCAGGTTCAAGGGATGCTCGAAAGGTGCGAGAGGCGCATCAGGGCTGTGT ATTGCCCATGGAGGTGGGCAGAGATGCCATAAGCCTGGGTGCCATAAAGGTGCAGAGAGC AGCACTGCCTATTGCAAGGCCCATGGCGGTGGTCGGCGGTGCGAGGAGCTTGGTTGCACC AAGAGTGCTGAAGGGAAGACAGATTATTGTATCGCTCACGGTGGAGGTCGTCGTTGTGAA CATGATGGCTGTCCTAAAGCTGCACGGGGTAAGTCTGGGCGGTGCATCAAGCACGGTGGT GGTAAGAGATGCACGGTGCAAGGTTGCATCCGGAGCGCTGAGGGTAAGGCCGGGCTCTGC ATTTCTCATGGTGGTGGCCGCCGGTGCCAGTTCCCGGACTGCAGTAAGGGGGCTCAAGGC AGCACATTGTACTGCAAAGGGCATGGCGGTGGCAAGCGGTGTATCTTTGACGGCTGCAGC AAAGGTGCTGAGGGGAGCACGCCTCTGTGCAAAGCACACGGTGGCGGGAAGCGATGCATG TTCGAAGGTGGCGGCGTCTGCCCAAAGAGCGTCCATGGTGGCACTGAGTACTGCGTGGCG CACGGAGGAGGGAAGCGCTGTTCGGTGGCTGGCTGCACCAAGAGTGCCCGTGGCCGCACG GACTGTTGCGTGAAGCACGGTGGTGGCAAGAGGTGCAAGGTCGACAACTGCAGCAAGAGC GCCCAGGGGAGCACGGACTTCTGCAAAGCCCACGGCGGCGGCAAGCGGTGCACTTGGGGA ACGGGCTGCGAGAAGTTCGCCCGCGGCAGGAGCGGCCTGTGCGCCGCGCATGGGACCTTG GCGGCCAAGCAGCAAGAGCGCGACGCGGCGAACAACGGCGCGGGCATGATCCCGCCAGGC CTTTTCAGCGGCATAGTGACCGTCGCTGCCACGAGCAGCATGACGAACGAGTACTCGTCG TCGGGCATCAGCACCGCGTCGGACTGCGACGGCACGGTGAGGAGCCAGGCGATGATGATA CCTCCCCAGGTGCTGGTGCCTCGCTCTATGATGCCCTCATCGTCGTCCGAACCTACCGTG CATGGGGGCAGAGAGGGAGGCTGTGCCGTTCCGGAGGGAAGGGTGCACGGTGGCGGCCTC TTGTCACTCCTCGGTGGCAGCTTCAGGAACGCCGACATGGATAAGCTCTGA

Peptide Sequence

PEP ID	Os04t0458200-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:22891020:22892741:1 gene:Os04g0458200 transcript:Os04t0458200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 4 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0458200-01);Similar to cDNA clone:J033037C08, full insert sequence. (Os04t0458200-02)
Sequence	HSFTVVDEASASPSVRSIGGYMPSLLFAPRSGSSAVNETHEAETQDSLDLTHSDNDNTQH VQHHLQLSPEPSAMTDTSFGVSSDVVTATTTSEQRNHPRHPKKCRFKGCSKGARGASGLC IAHGGGQRCHKPGCHKGAESSTAYCKAHGGGRRCEELGCTKSAEGKTDYCIAHGGGRRCE HDGCPKAARGKSGRCIKHGGGKRCTVQGCIRSAEGKAGLCISHGGGRRCQFPDCSKGAQG STLYCKGHGGGKRCIFDGCSKGAEGSTPLCKAHGGGKRCMFEGGGVCPKSVHGGTEYCVA HGGGKRCSVAGCTKSARGRTDCCVKHGGGKRCKVDNCSKSAQGSTDFCKAHGGGKRCTWG TGCEKFARGRSGLCAAHGTLAAKQQERDAANNGAGMIPPGLFSGIVTVAATSSMTNEYSS SGISTASDCDGTVRSQAMMIPPQVLVPRSMMPSSSSEPTVHGGREGGCAVPEGRVHGGGL LSLLGGSFRNADMDKL

Transcript Sequence

Transcript ID	Os04t0458200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22891020:22892741:1 gene:Os04g0458200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 4 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0458200-01);Similar to cDNA clone:J033037C08, full insert sequence. (Os04t0458200-02)
Sequence	CATTCTTTTACTGTTGTTGATGAAGCCTCAGCATCTCCTTCTGTAAGGAGCATCGGTGGC TACATGCCATCCCTACTCTTTGCTCCACGCTCCGGTTCTTCTGCTGTCAATGAGACCCAC GAAGCAGAAACCCAGGATTCACTAGACCTGACGCACAGCGACAATGATAACACTCAGCAC GTTCAACATCACCTTCAGCTGAGCCCTGAGCCTTCTGCCATGACAGATACTTCATTTGGT GTGAGCTCCGACGTTGTCACGGCAACAACCACATCAGAACAAAGGAATCATCCCCGGCAT CCCAAGAAGTGCAGGTTCAAGGGATGCTCGAAAGGTGCGAGAGGCGCATCAGGGCTGTGT ATTGCCCATGGAGGTGGGCAGAGATGCCATAAGCCTGGGTGCCATAAAGGTGCAGAGAGC AGCACTGCCTATTGCAAGGCCCATGGCGGTGGTCGGCGGTGCGAGGAGCTTGGTTGCACC AAGAGTGCTGAAGGGAAGACAGATTATTGTATCGCTCACGGTGGAGGTCGTCGTTGTGAA CATGATGGCTGTCCTAAAGCTGCACGGGGTAAGTCTGGGCGGTGCATCAAGCACGGTGGT GGTAAGAGATGCACGGTGCAAGGTTGCATCCGGAGCGCTGAGGGTAAGGCCGGGCTCTGC ATTTCTCATGGTGGTGGCCGCCGGTGCCAGTTCCCGGACTGCAGTAAGGGGGCTCAAGGC AGCACATTGTACTGCAAAGGGCATGGCGGTGGCAAGCGGTGTATCTTTGACGGCTGCAGC AAAGGTGCTGAGGGGAGCACGCCTCTGTGCAAAGCACACGGTGGCGGGAAGCGATGCATG TTCGAAGGTGGCGGCGTCTGCCCAAAGAGCGTCCATGGTGGCACTGAGTACTGCGTGGCG CACGGAGGAGGGAAGCGCTGTTCGGTGGCTGGCTGCACCAAGAGTGCCCGTGGCCGCACG GACTGTTGCGTGAAGCACGGTGGTGGCAAGAGGTGCAAGGTCGACAACTGCAGCAAGAGC GCCCAGGGGAGCACGGACTTCTGCAAAGCCCACGGCGGCGGCAAGCGGTGCACTTGGGGA ACGGGCTGCGAGAAGTTCGCCCGCGGCAGGAGCGGCCTGTGCGCCGCGCATGGGACCTTG GCGGCCAAGCAGCAAGAGCGCGACGCGGCGAACAACGGCGCGGGCATGATCCCGCCAGGC CTTTTCAGCGGCATAGTGACCGTCGCTGCCACGAGCAGCATGACGAACGAGTACTCGTCG TCGGGCATCAGCACCGCGTCGGACTGCGACGGCACGGTGAGGAGCCAGGCGATGATGATA CCTCCCCAGGTGCTGGTGCCTCGCTCTATGATGCCCTCATCGTCGTCCGAACCTACCGTG CATGGGGGCAGAGAGGGAGGCTGTGCCGTTCCGGAGGGAAGGGTGCACGGTGGCGGCCTC TTGTCACTCCTCGGTGGCAGCTTCAGGAACGCCGACATGGATAAGCTCTGAATTTGCTTC TCCGGCTGCCGAATTCTGTTAGTTTGGTTGTGTACATAAACAAGGCAATTTATTTTGCCG ATTTGAACTTCTTTGGCTTTTTTTCCTTTGTCTAGATAAATGGTCCGTGGTTGCTTTAGT CCAGTCATTTGTACATTCATGTCCGTGGCAATTGTCCTGAACACCTTCTCATGTCAGTTT AGTCAGTCGGAGGAACTGGCAATAAAATTTGTGTATTGGTTT