Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0457700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22865860:22866935:1 gene:Os04g0457700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.14 protein. (Os04t0457700-01)
Sequence

ATGTGGCATGTCCCTTCACGGCCTGAATCACCTGCATTTAACTTGTGCCCACATTTCGTT
CATTATGTACGTACTACGTTTTTATGTATACGTAATGCAGCAGGTGTGCAAGGTTCAGCC
GGTGGCCTACACAACGGCGGCACGGCTCCATCTGCTGCTGCTGCGAACGGGAGCACCACC
ACCGCCTACGACGACAGAGGCACCGGCGGCCAGACGGCGACGTTCCAGGTGCAGCAGGGC
GCACAGCCGGAGGAAGAGACGACGACGGAGATGGGCAACGCGGCGGAGGCGGCGACGGGA
TCGCGGCTGCCGGACTGCACGCACGCGTGCGGGCCGTGCTCCCCGTGCCGGCGCGTGATG
GTGAGCCTCCGGTGCGCCGAGGCCGCGGAGTCGTGCCCCGTCGCGTACCGCTGCATGTGC
CGCGGCAGGTTCTTCCGCGTGCCCACCCTCTAG

Peptide Sequence

PEP ID

Os04t0457700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22865860:22866935:1 gene:Os04g0457700 transcript:Os04t0457700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.14 protein. (Os04t0457700-01)
Sequence

MWHVPSRPESPAFNLCPHFVHYVRTTFLCIRNAAGVQGSAGGLHNGGTAPSAAAANGSTT
TAYDDRGTGGQTATFQVQQGAQPEEETTTEMGNAAEAATGSRLPDCTHACGPCSPCRRVM
VSLRCAEAAESCPVAYRCMCRGRFFRVPTL

Transcript Sequence

Transcript ID

Os04t0457700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22865860:22866935:1 gene:Os04g0457700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.14 protein. (Os04t0457700-01)
Sequence

GCTTGCGTGCTCACTGTCGCTGACTGCTCTCTCTGCTTGGCGTGTCGATCGATCTTGTGC
TTGTGCTGATCAGCTAGCTGCTCCAACTTCGCGTTGGTGCTTTAGTGACGGATTCACCGG
CGGCAATGAGGAGGTTTAGTGCCATGGCGCTAGCGTTTGCAGTGGTCGTGATGAGCTCGT
GCGTTGCTGATGGCGTCAGGACGATACCAGGTAATTCACCAGAGCTTCCCACTGGAGTAC
GTACTAATCTGACTAGGAATACACGTGTTCATGTAGTAAGCTTTTAGTGCTACTCCTGTG
TAGTGTGCACTACTAGTAAAGATGGCACGTCGTACGGCGGATGCATCATGTGGCATGTCC
CTTCACGGCCTGAATCACCTGCATTTAACTTGTGCCCACATTTCGTTCATTATGTACGTA
CTACGTTTTTATGTATACGTAATGCAGCAGGTGTGCAAGGTTCAGCCGGTGGCCTACACA
ACGGCGGCACGGCTCCATCTGCTGCTGCTGCGAACGGGAGCACCACCACCGCCTACGACG
ACAGAGGCACCGGCGGCCAGACGGCGACGTTCCAGGTGCAGCAGGGCGCACAGCCGGAGG
AAGAGACGACGACGGAGATGGGCAACGCGGCGGAGGCGGCGACGGGATCGCGGCTGCCGG
ACTGCACGCACGCGTGCGGGCCGTGCTCCCCGTGCCGGCGCGTGATGGTGAGCCTCCGGT
GCGCCGAGGCCGCGGAGTCGTGCCCCGTCGCGTACCGCTGCATGTGCCGCGGCAGGTTCT
TCCGCGTGCCCACCCTCTAGCCAGCCGAGTTCGCGTCGCGCGGCCGTGCGCCCGTGCGTG
CGACGCCGACACGTTGATGGGTGGATAGGTAGAGAGAGGATTTTCTAATGCCGCGTTGTA
TTTTGTACTCCTAGGCCCTAGCACGCGTGTGGGCAGGTAGGCTGCCGGCCAGCATCTACG
CGAGCACGCTTGCTGCACTAGCTCTCGTCCCTTTCTTTTGCACTTTTGTTTTGGCTAGTT
ATAGTTTTGCACTTTTGGCTGTCCTTGGTAGAGTACGTAATTAACCTGGGCGTGAA