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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0456200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:22821083:22821718:1 gene:Os04g0456200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.6 protein. (Os04t0456200-00)
Sequence

ATGGCGCATAAGCTCCTCTGCTTTGCGGCACTCATTTCCATGGCGGCTTTGGCCGCCGGA
GCAACGTCGGAGGAGGACACGGGCGCGCTGCTGCTCCCGGGCTCGACGGGGTCGAACCAG
TGCGTGTACACGCTCTACGTGGAGACGGGCTCGATCTGGAAGGCCGGCACCGACGCGGCG
ATCGGCGTGGAGCTCTACACGGCGGCCGGCAACGGCATCCTCATCAGGAACCTGCAGGCG
TGGGGCGGCCTCATGGCGGCCGGCCACGACTACTTCGAGCGGAGCAACGTCGACATCTTC
AGCGGCCGCGGGCCATGCCTGGGAGCCCCCGTCTGCCGCATGAAGCTCGTCTCCAACGGC
GCCGGCGAGCACCACGGGTGGTTCTGCAAGTCCGTCGAGGTCACCGTCGCCGGTCCCCAC
GCCAGGTGCAACAGGGCGGCGTTCGACGTCCAGCAGTGGCTCGCCACCGACGCGCCGCCG
TACCAGCTCTACGCCGAGCGGAGCGTCTGCGGCAAGATCAGCACGGCCACCGCCGCCGCC
GAGGAGGAGAGCTGA

Peptide Sequence

PEP ID

Os04t0456200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:22821083:22821718:1 gene:Os04g0456200 transcript:Os04t0456200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.6 protein. (Os04t0456200-00)
Sequence

MAHKLLCFAALISMAALAAGATSEEDTGALLLPGSTGSNQCVYTLYVETGSIWKAGTDAA
IGVELYTAAGNGILIRNLQAWGGLMAAGHDYFERSNVDIFSGRGPCLGAPVCRMKLVSNG
AGEHHGWFCKSVEVTVAGPHARCNRAAFDVQQWLATDAPPYQLYAERSVCGKISTATAAA
EEES

Transcript Sequence

Transcript ID

Os04t0456200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22821083:22821718:1 gene:Os04g0456200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0523F07.6 protein. (Os04t0456200-00)
Sequence

ATGGCGCATAAGCTCCTCTGCTTTGCGGCACTCATTTCCATGGCGGCTTTGGCCGCCGGA
GCAACGTCGGAGGAGGACACGGGCGCGCTGCTGCTCCCGGGCTCGACGGGGTCGAACCAG
TGCGTGTACACGCTCTACGTGGAGACGGGCTCGATCTGGAAGGCCGGCACCGACGCGGCG
ATCGGCGTGGAGCTCTACACGGCGGCCGGCAACGGCATCCTCATCAGGAACCTGCAGGCG
TGGGGCGGCCTCATGGCGGCCGGCCACGACTACTTCGAGCGGAGCAACGTCGACATCTTC
AGCGGCCGCGGGCCATGCCTGGGAGCCCCCGTCTGCCGCATGAAGCTCGTCTCCAACGGC
GCCGGCGAGCACCACGGGTGGTTCTGCAAGTCCGTCGAGGTCACCGTCGCCGGTCCCCAC
GCCAGGTGCAACAGGGCGGCGTTCGACGTCCAGCAGTGGCTCGCCACCGACGCGCCGCCG
TACCAGCTCTACGCCGAGCGGAGCGTCTGCGGCAAGATCAGCACGGCCACCGCCGCCGCC
GAGGAGGAGAGCTGA