Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0454200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22744192:22748050:1 gene:Os04g0454200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os04t0454200-01)
Sequence

ATGGCTGGAGGTGGGTTCCCCGTGGCCGGCGGCGCCCCGCCGGGCGACTATGGCGGCGGC
ATAACCTTCTCCGTCGTCGTCACCTGCCTCATGGCCGCCTCCGGCGGCCTCATCTTCGGC
TACGACATCGGCATCTCCGGGGGAGTGACGGCGATGGAGTCGTTCCTGGCGGCCTTCTTC
CCGGGGGTGCTCCGGCGGATGGCGGCGGCGCGGCGGGACGAGTACTGCGTCTACGACAGC
CACGTGCTGACGGCGTTCACGTCGTCGCTGTACCTGGCCGGGCTGGCCGCGTCGCTGGCG
GCCGGCCGCGTCACCAGGGCGGTCGGGAGGCAGGCCGTCATGCTCGCGGGCGGGGCGCTC
TTCTTCGCCGGCGCCGCCGTCAACGCCGCCGCGGTCAACATCGCCATGCTCATCGTCGGC
CGCATGCTGCTCGGCTTCGGCATTGGCTTCACCAACCAGGCGGCGCCGGTGTACCTGGCG
GAGACGGCGCCGGCGAAGTGGCGGGGTGCATTCACGACGGGGTTCCAGCTCTTCCTCGGC
ATCGGCAACCTGACGGCCAACCTGACAAACTACGGCGCGGCGCGCATCCCGCGGTGGGGG
TGGCGTCTCTCCCTCGGCCTGGCGGCGGCGCCGGCGTCCGTCATCCTCGTCGGCACGCTG
CTCATCTCGGACACCCCCAGCAGCCTCCTCGTGCGCGGGCGGGTGGAGCAGGCGCGCGCC
GCGCTCCGGCGCGTGCGCGGCGCCAAGGCGGACGTGGACGCCGAGCTGGAGGGCGTGGCG
CGCGCGGTCGAGGCGGCGCGCGCCAACGAGGAGGGCGCGTACCGCAGGATCCTCTGGAGG
CAGCACCGCCCCCACCTGGTGATGGCCGTCGCCGTGCCGCTGCTCCAGCAGCTCACCGGC
GTCATCGTCATCGCCTTCTTCTCGCCGGTGCTCTTCCAGACGGCCGGGTTCGGCAGCAAC
GCGTCGCTGATGGGGGCCGTCATCCTCGGCGCCGTCAACCTCGGCTCCACCCTCGTCTCC
ATCGCCACGGTGGACCGGTACGGCCGCCGGGTGCTGTTCCTGACCGGCGGCCTCGTGATG
ATCGCCTGCCAGGTCGCGGTGGCGTGGATCATGGGGTCGCAGATCGGGCGGGACGGCGAG
TCGGCGATGGCGAGGCGCTACTCCGTGGCGGTGTTGGCGCTGACGTGCGTCTTCTCGGCG
GCGTTCGGGTGGTCGTGGGGCCCGCTGACGTGGGTGATCCCCGGCGAGATATTCCCGGTG
GAGATCCGGTCGGCGGGGCAGGGGATCAGCGTGGCCGTCAACCTCGGCGCCACCTTCGTG
CTCACGCAGACGTTCCTCGCCATGCTGTGCAGCTTCAAGTACGCCACGTTCCTCTACTAC
GCGGCCTGGGTCGCCGTCATGACCGCCTTCGTGTGGGCGTTCCTGCCGGAGACCAAGGGG
GTGCCGCTCGAGGCCATGGGCGCCGTCTGGGCGCGGCACTGGTACTGGCGGCGCTTCGTG
CAGCCGCCACCGGCGGCCAAGGACGCCATGCTGCCGGAGGTCCTCGTGAACTGA

Peptide Sequence

PEP ID

Os04t0454200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22744192:22748050:1 gene:Os04g0454200 transcript:Os04t0454200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os04t0454200-01)
Sequence

MAGGGFPVAGGAPPGDYGGGITFSVVVTCLMAASGGLIFGYDIGISGGVTAMESFLAAFF
PGVLRRMAAARRDEYCVYDSHVLTAFTSSLYLAGLAASLAAGRVTRAVGRQAVMLAGGAL
FFAGAAVNAAAVNIAMLIVGRMLLGFGIGFTNQAAPVYLAETAPAKWRGAFTTGFQLFLG
IGNLTANLTNYGAARIPRWGWRLSLGLAAAPASVILVGTLLISDTPSSLLVRGRVEQARA
ALRRVRGAKADVDAELEGVARAVEAARANEEGAYRRILWRQHRPHLVMAVAVPLLQQLTG
VIVIAFFSPVLFQTAGFGSNASLMGAVILGAVNLGSTLVSIATVDRYGRRVLFLTGGLVM
IACQVAVAWIMGSQIGRDGESAMARRYSVAVLALTCVFSAAFGWSWGPLTWVIPGEIFPV
EIRSAGQGISVAVNLGATFVLTQTFLAMLCSFKYATFLYYAAWVAVMTAFVWAFLPETKG
VPLEAMGAVWARHWYWRRFVQPPPAAKDAMLPEVLVN

Transcript Sequence

Transcript ID

Os04t0454200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22744192:22748050:1 gene:Os04g0454200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os04t0454200-01)
Sequence

TTGTAGTAGCTAGCTACCAGTCCAACCAACACCAACAACTGCGCGAGTGAGCGCGCGGCT
ATTGCGTGCCACGGCGTGCCGTTGAGCGATGGCTGGAGGTGGGTTCCCCGTGGCCGGCGG
CGCCCCGCCGGGCGACTATGGCGGCGGCATAACCTTCTCCGTCGTCGTCACCTGCCTCAT
GGCCGCCTCCGGCGGCCTCATCTTCGGCTACGACATCGGCATCTCCGGGGGAGTGACGGC
GATGGAGTCGTTCCTGGCGGCCTTCTTCCCGGGGGTGCTCCGGCGGATGGCGGCGGCGCG
GCGGGACGAGTACTGCGTCTACGACAGCCACGTGCTGACGGCGTTCACGTCGTCGCTGTA
CCTGGCCGGGCTGGCCGCGTCGCTGGCGGCCGGCCGCGTCACCAGGGCGGTCGGGAGGCA
GGCCGTCATGCTCGCGGGCGGGGCGCTCTTCTTCGCCGGCGCCGCCGTCAACGCCGCCGC
GGTCAACATCGCCATGCTCATCGTCGGCCGCATGCTGCTCGGCTTCGGCATTGGCTTCAC
CAACCAGGCGGCGCCGGTGTACCTGGCGGAGACGGCGCCGGCGAAGTGGCGGGGTGCATT
CACGACGGGGTTCCAGCTCTTCCTCGGCATCGGCAACCTGACGGCCAACCTGACAAACTA
CGGCGCGGCGCGCATCCCGCGGTGGGGGTGGCGTCTCTCCCTCGGCCTGGCGGCGGCGCC
GGCGTCCGTCATCCTCGTCGGCACGCTGCTCATCTCGGACACCCCCAGCAGCCTCCTCGT
GCGCGGGCGGGTGGAGCAGGCGCGCGCCGCGCTCCGGCGCGTGCGCGGCGCCAAGGCGGA
CGTGGACGCCGAGCTGGAGGGCGTGGCGCGCGCGGTCGAGGCGGCGCGCGCCAACGAGGA
GGGCGCGTACCGCAGGATCCTCTGGAGGCAGCACCGCCCCCACCTGGTGATGGCCGTCGC
CGTGCCGCTGCTCCAGCAGCTCACCGGCGTCATCGTCATCGCCTTCTTCTCGCCGGTGCT
CTTCCAGACGGCCGGGTTCGGCAGCAACGCGTCGCTGATGGGGGCCGTCATCCTCGGCGC
CGTCAACCTCGGCTCCACCCTCGTCTCCATCGCCACGGTGGACCGGTACGGCCGCCGGGT
GCTGTTCCTGACCGGCGGCCTCGTGATGATCGCCTGCCAGGTCGCGGTGGCGTGGATCAT
GGGGTCGCAGATCGGGCGGGACGGCGAGTCGGCGATGGCGAGGCGCTACTCCGTGGCGGT
GTTGGCGCTGACGTGCGTCTTCTCGGCGGCGTTCGGGTGGTCGTGGGGCCCGCTGACGTG
GGTGATCCCCGGCGAGATATTCCCGGTGGAGATCCGGTCGGCGGGGCAGGGGATCAGCGT
GGCCGTCAACCTCGGCGCCACCTTCGTGCTCACGCAGACGTTCCTCGCCATGCTGTGCAG
CTTCAAGTACGCCACGTTCCTCTACTACGCGGCCTGGGTCGCCGTCATGACCGCCTTCGT
GTGGGCGTTCCTGCCGGAGACCAAGGGGGTGCCGCTCGAGGCCATGGGCGCCGTCTGGGC
GCGGCACTGGTACTGGCGGCGCTTCGTGCAGCCGCCACCGGCGGCCAAGGACGCCATGCT
GCCGGAGGTCCTCGTGAACTGACAACGTATACTGTACGTGTTCTCTGCCTTGACCGTGTG
GCGGCGCTGCATTAATTCGTGGGAAGTTGTGTAAAATTAAATCTGGTTTCTGGTTTAACG
GTTCCTACATGGTTGAATACCATCCCGTGTTTGTCCTCTTGCGAAAAATTTGTATTGTTT
ACATATGAACAAATCCAAAGTCCGTGTTCTATTTTAGTTTCT