Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0452500-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:22582841:22592982:1 gene:Os04g0452500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TANSVERSE FILAMENT description:Similar to H0505F09.1 protein. (Os04t0452500-00)
Sequence	ATGCAGAAGCTGGGTTTATCGGGGCTTAGGGGTCTCGAGGGGTTCCGATCTCTCGCTGGA TCCACCTCGACGGCCGCGAAGGCCCCGAACCCCAAGCCGTCGTCCGATATTGGAGGGAGC ACGTACGGGAGCTTCGCCAATCTTAAGATCACAGCAGAAAAGCTGGTTAAGGAGCAGGCT TCAGTGAAGACTGATCTAGAAATGACGCATACCAAGTTGAGAAGAGCAACAGAACAGATA AATCTGTTAGAAGCAAAGCTCCAACAAGCTGTCAATGAAAATGCAAAGCTTAAGGTGAAA CAGACTGAAGATTCAAAGCTCTGGCAGGGATTAGATTCAAAAGTTTCCTCAACAAAGACT TTGTGCAATCAACTGACAGAAACTCTGCAGCAGTTAGCTAGTCAGACAGAAAGAGCTGAG GAAGATAAGAAGTTTTTTGAGGAGATTCTTGGCAAGAATTCAAAAGCTTTTGAAGAATTC AACTGCCTGTTGCACGATTCATCAATAAAACTGGAATGTGCAGAACAAATGATCATTTCA GGGAAACAGGAGATGTTGCGGATCAAACAAGAGAAAGAAGAGATGGATCAGAGTTACAAG GAACAGCTATATGCAAGTGATACTACCATAAGAGAAAAAAATTCTCTCATCAAACAGTTG GAAGATTCCATTGAACAAAATAAAGCCCGACTGTTGTATGTTGACTCCCGTTTGGAATGC ATGGAGCAAGAGTTGAAGCTAAAAGAAGATGTTTGCATTTGTCTGAAAGAAAACCTGGCA AGCACTGAAAGTGAAAAGAATGACTTGAAGCTTAGGAACGAGGGCTACACTTTGGAAGTT CAGAAACTATCCAAGGACAACAAGGAGCTTAATGAATTGCTTAGTGGTTTTACGGTTAAG GTAACTGAGCTAGATAAAGAGCACACATCAATTTCAAGTCATGTCACTCAGTTGATTTCT TCATTTGAGAGATATGATGGAAAGGTTCACGAGGAAAAAATGTTGATGATAAAATCTGCC AAGGACAAATTTGAACATCTCCAAAATCAGTATGTAAATTTGATATCAGAAAACAATGCT CTCCAAACTGAAATCGAGGAGCTGAAGTCCAGAATCATAGAGCTGCAGAAAACTCAAGAG ATTGTCATGGTTCAACATGTAGAAGAATGCCAAGTTGCTGAAGATAAGATCAGAAGATTG GAGTCTGAAGCAGAAATTTCTGCCTCCAACATTAGTCAGCTAGAAAAGGTAGCTTCTGAC CTAGAAGGGAGGGTTCAAAAACTTCTGGAGGATTCTAGATCTGCTGAAAATCACAAGCAA GAGTTGCTTCAGAAGATTCTGAAGCTAGAATCAGATAATCAGGAGCTTCTAGGTCGAGTG CAATCTGTTTTGAATGAGAAGTCTAATGATACGGAATCTCTGCAAGGAGAGATAGCTAAG CGTGACCAACAGGTTGAGACACTTGAGAACCAGGTCAATCAGCTTTGCAGTATTATTGAT GAGAAAGAACAACTACACACTTGTGCTGTAGAAAGAGAGAAGAATTTAGAGGAACAGAAG TTACAGGTCCAAGCATCACTTGCTGCAACAGAAAGCCAACTTACTGAGGCAAAAAAACAG TATGATATCATGCTTGAAGGTAAAAAGATAGAGCTGTCCAAGCATCTGAAAGAATTATCA CTGAAAAATGACCAGGCAATCAATGAAATCCGTAGGAAATATGAACTAGAAAAGGTAGAA ATCATTAATATTGAAAAAGAAAAGGCCGAGAAGCTCATAAAGGAAATGGAAAACAAATGC AATGAAAAGATTTCAGAAAACAGGCAAGATTCTGAGAGGTATTTGATGTGTCTAAAGGAG GAGCATGGCTCAATGGTTGCAAGAATTCAGCAGGATAATGAGCATAAGGAATCAACTCTT CGAGCTTATCATAAAGAAGAACTCCAGCGCATCCAATCTCAGGCTGAGAATGAATTGAGG GAGAGATTGTCATCGCTCAGAAAGGATCATGAAATTCAAATGAAATCATTGACTAAAAAG CATGAGGAAAATTGTCAGAAGCTTCAGGATGAACTGGAGCTTCAGAAGTCAAAGGAGGAG AAGCAAAGAGCATTGTTACAGTTACAATGGAAAGTAATGGGCGAAACCCAACAGGTTGAT CAAGAAGTAAACTCTAAGAAGGAATACTCTGTTTCATCAATAAAGAGGAGAGATCCATAT ATCAGAAAAGAACATCAGCTTCAGTTGGTTAGTCCTGAGACCAAACGGAAGGATGTTAAT CTATCTGGCATTATACAATCACCAATTACAAACATGCTGAGAAAGGTAGAGAAAGGAACC CAGGATATTCCTAAGCATAGAAAGGTAACACATCATGAATATGAAGTTGAGACAGCAAAT GGAAGAATCACAAAGCGCAGGAAAACTAAGAGCACCGTCATGTTTGGGGAACCCAACACT CAGAAGTCATTGCATGATACTGCTGACAAGGATCCTACAAAAATGAAGAAGGTTGTTGCT GGATCCCATCCCCACCCTGCAAACATTGGTGAATTGTTTTCTGAGGGCTCGTTGAATCCA TATGCCGAAGATCCTTATGCATTTGGCTAG

Peptide Sequence

PEP ID	Os04t0452500-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:22582841:22592982:1 gene:Os04g0452500 transcript:Os04t0452500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TANSVERSE FILAMENT description:Similar to H0505F09.1 protein. (Os04t0452500-00)
Sequence	MQKLGLSGLRGLEGFRSLAGSTSTAAKAPNPKPSSDIGGSTYGSFANLKITAEKLVKEQA SVKTDLEMTHTKLRRATEQINLLEAKLQQAVNENAKLKVKQTEDSKLWQGLDSKVSSTKT LCNQLTETLQQLASQTERAEEDKKFFEEILGKNSKAFEEFNCLLHDSSIKLECAEQMIIS GKQEMLRIKQEKEEMDQSYKEQLYASDTTIREKNSLIKQLEDSIEQNKARLLYVDSRLEC MEQELKLKEDVCICLKENLASTESEKNDLKLRNEGYTLEVQKLSKDNKELNELLSGFTVK VTELDKEHTSISSHVTQLISSFERYDGKVHEEKMLMIKSAKDKFEHLQNQYVNLISENNA LQTEIEELKSRIIELQKTQEIVMVQHVEECQVAEDKIRRLESEAEISASNISQLEKVASD LEGRVQKLLEDSRSAENHKQELLQKILKLESDNQELLGRVQSVLNEKSNDTESLQGEIAK RDQQVETLENQVNQLCSIIDEKEQLHTCAVEREKNLEEQKLQVQASLAATESQLTEAKKQ YDIMLEGKKIELSKHLKELSLKNDQAINEIRRKYELEKVEIINIEKEKAEKLIKEMENKC NEKISENRQDSERYLMCLKEEHGSMVARIQQDNEHKESTLRAYHKEELQRIQSQAENELR ERLSSLRKDHEIQMKSLTKKHEENCQKLQDELELQKSKEEKQRALLQLQWKVMGETQQVD QEVNSKKEYSVSSIKRRDPYIRKEHQLQLVSPETKRKDVNLSGIIQSPITNMLRKVEKGT QDIPKHRKVTHHEYEVETANGRITKRRKTKSTVMFGEPNTQKSLHDTADKDPTKMKKVVA GSHPHPANIGELFSEGSLNPYAEDPYAFG

Transcript Sequence

Transcript ID	Os04t0452500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22582841:22592982:1 gene:Os04g0452500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TANSVERSE FILAMENT description:Similar to H0505F09.1 protein. (Os04t0452500-00)
Sequence	AAACGCGTCATCTTCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCGCTTGATCCCCTCTCG CTTTAGAAATCTCTAGACGCTTCTAGAAGTCTCGCGATTCTCCTCGATACAGCCTAGGGG ATCGGAGCTGCGTGCGTCCTCGTTAGCTCGGCGGAGGCCCGGGGTTCGATCGGAGGGCGG GATCGCTAGCTTACGCCTCGGGTTCCCTGGAAGCTTCTGGAATCATCCGCATTCTGCAGG AGAGGCTAGGGTTTTGGAAGCCGCTGCGTTCAGAGCCACTCGATCCGCAAATCGTTTCGA ACAATCTCGAAGCTTCTCGACGCTTCGGGGATCGTGGGGGCGAAGCTATTGTTGCGAGGT GGTACCCCAAATCGCCTCCTACGCCCTGATCGCTCCGCCGCCGCCGGCGAACCCTAGGGT TTCGACGACAGGATGCAGAAGCTGGGTTTATCGGGGCTTAGGGGTCTCGAGGGGTTCCGA TCTCTCGCTGGATCCACCTCGACGGCCGCGAAGGCCCCGAACCCCAAGCCGTCGTCCGAT ATTGGAGGGAGCACGTACGGGAGCTTCGCCAATCTTAAGATCACAGCAGAAAAGCTGGTT AAGGAGCAGGCTTCAGTGAAGACTGATCTAGAAATGACGCATACCAAGTTGAGAAGAGCA ACAGAACAGATAAATCTGTTAGAAGCAAAGCTCCAACAAGCTGTCAATGAAAATGCAAAG CTTAAGGTGAAACAGACTGAAGATTCAAAGCTCTGGCAGGGATTAGATTCAAAAGTTTCC TCAACAAAGACTTTGTGCAATCAACTGACAGAAACTCTGCAGCAGTTAGCTAGTCAGACA GAAAGAGCTGAGGAAGATAAGAAGTTTTTTGAGGAGATTCTTGGCAAGAATTCAAAAGCT TTTGAAGAATTCAACTGCCTGTTGCACGATTCATCAATAAAACTGGAATGTGCAGAACAA ATGATCATTTCAGGGAAACAGGAGATGTTGCGGATCAAACAAGAGAAAGAAGAGATGGAT CAGAGTTACAAGGAACAGCTATATGCAAGTGATACTACCATAAGAGAAAAAAATTCTCTC ATCAAACAGTTGGAAGATTCCATTGAACAAAATAAAGCCCGACTGTTGTATGTTGACTCC CGTTTGGAATGCATGGAGCAAGAGTTGAAGCTAAAAGAAGATGTTTGCATTTGTCTGAAA GAAAACCTGGCAAGCACTGAAAGTGAAAAGAATGACTTGAAGCTTAGGAACGAGGGCTAC ACTTTGGAAGTTCAGAAACTATCCAAGGACAACAAGGAGCTTAATGAATTGCTTAGTGGT TTTACGGTTAAGGTAACTGAGCTAGATAAAGAGCACACATCAATTTCAAGTCATGTCACT CAGTTGATTTCTTCATTTGAGAGATATGATGGAAAGGTTCACGAGGAAAAAATGTTGATG ATAAAATCTGCCAAGGACAAATTTGAACATCTCCAAAATCAGTATGTAAATTTGATATCA GAAAACAATGCTCTCCAAACTGAAATCGAGGAGCTGAAGTCCAGAATCATAGAGCTGCAG AAAACTCAAGAGATTGTCATGGTTCAACATGTAGAAGAATGCCAAGTTGCTGAAGATAAG ATCAGAAGATTGGAGTCTGAAGCAGAAATTTCTGCCTCCAACATTAGTCAGCTAGAAAAG GTAGCTTCTGACCTAGAAGGGAGGGTTCAAAAACTTCTGGAGGATTCTAGATCTGCTGAA AATCACAAGCAAGAGTTGCTTCAGAAGATTCTGAAGCTAGAATCAGATAATCAGGAGCTT CTAGGTCGAGTGCAATCTGTTTTGAATGAGAAGTCTAATGATACGGAATCTCTGCAAGGA GAGATAGCTAAGCGTGACCAACAGGTTGAGACACTTGAGAACCAGGTCAATCAGCTTTGC AGTATTATTGATGAGAAAGAACAACTACACACTTGTGCTGTAGAAAGAGAGAAGAATTTA GAGGAACAGAAGTTACAGGTCCAAGCATCACTTGCTGCAACAGAAAGCCAACTTACTGAG GCAAAAAAACAGTATGATATCATGCTTGAAGGTAAAAAGATAGAGCTGTCCAAGCATCTG AAAGAATTATCACTGAAAAATGACCAGGCAATCAATGAAATCCGTAGGAAATATGAACTA GAAAAGGTAGAAATCATTAATATTGAAAAAGAAAAGGCCGAGAAGCTCATAAAGGAAATG GAAAACAAATGCAATGAAAAGATTTCAGAAAACAGGCAAGATTCTGAGAGGTATTTGATG TGTCTAAAGGAGGAGCATGGCTCAATGGTTGCAAGAATTCAGCAGGATAATGAGCATAAG GAATCAACTCTTCGAGCTTATCATAAAGAAGAACTCCAGCGCATCCAATCTCAGGCTGAG AATGAATTGAGGGAGAGATTGTCATCGCTCAGAAAGGATCATGAAATTCAAATGAAATCA TTGACTAAAAAGCATGAGGAAAATTGTCAGAAGCTTCAGGATGAACTGGAGCTTCAGAAG TCAAAGGAGGAGAAGCAAAGAGCATTGTTACAGTTACAATGGAAAGTAATGGGCGAAACC CAACAGGTTGATCAAGAAGTAAACTCTAAGAAGGAATACTCTGTTTCATCAATAAAGAGG AGAGATCCATATATCAGAAAAGAACATCAGCTTCAGTTGGTTAGTCCTGAGACCAAACGG AAGGATGTTAATCTATCTGGCATTATACAATCACCAATTACAAACATGCTGAGAAAGGTA GAGAAAGGAACCCAGGATATTCCTAAGCATAGAAAGGTAACACATCATGAATATGAAGTT GAGACAGCAAATGGAAGAATCACAAAGCGCAGGAAAACTAAGAGCACCGTCATGTTTGGG GAACCCAACACTCAGAAGTCATTGCATGATACTGCTGACAAGGATCCTACAAAAATGAAG AAGGTTGTTGCTGGATCCCATCCCCACCCTGCAAACATTGGTGAATTGTTTTCTGAGGGC TCGTTGAATCCATATGCCGAAGATCCTTATGCATTTGGCTAGAAGCTCACATTTGAGGTG CTGACCTTCAGAAGCATGATGATGACTCCCGAGTGCAATCCCCAAGTCGGATTGAATCAA TGATCTTGCGGCCTTAGGCATCTGACCATCCTGTTGTACGAAACGACAATCGTTAACTGC GTTGTATCTGCAATACTGTTACGACACGGGTTATGGCATCTGACCATCCTGGTGTTCATA ACATACTATCACTACCTGTGATGTATCTGGAATATCGATACGACAGACAACGATTCTCCT GCGCGTACAGCATCAACTGAAAATGCCAGTGTTAGTTTTGCTATTTCTAACGATTTGCGG AAGGATTTTAAT