Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0450600-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:22448084:22450533:1 gene:Os04g0450600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.21 protein. (Os04t0450600-00)
Sequence

ATGGCGGTGCTCAAATCTCTTGTTGCTTGCAAAGGCTTGGCGCTGTGCGCTCCAGCGATT
GCTCAGCGTCACCGGAACACGCCGTTATCTGCATCGGCTCATCGCCGGCAAATCCTGATC
ACCGGCTTAACGATGAACTCCTCGGGCATCAATAGTGCTTTGCCGGTCAGAGGAGCTGCA
CAAATCCCTGCAGTTGGTTCTGGTCCTCCAGCACCGTCAGGAGGAAATCTCCCAGTACCC
AGCATGCCTTCATGGGCCAAATGGGTAGTTGGGGCCATCATTGTTGCTATACCCATCTAC
AGAAAGATAAGAGCATTGGAAGACACCGTGGAGAAGACAGCGGAGGTAGCAATCGAGGTG
GTCGACACGGTGGCGGAGGCGACTGAGAAGGTCGCCGGCGAGCTGGCCGACGCTTTTCCC
GGCAACGAAAATCTCAAGGAGGTTGCCTCCAAGATTAAGACCGTAGCCGATGTGATAGAG
GATGATGCCGAGAAAGCCGAGGCCCTAATCCAGAAGGTTGATGAGATAAAGAAAGAGTTG
GATGCAATAGTGGATCCCATCATCGACAAGATAGACAAGGAAGAGCTGTAG

Peptide Sequence

PEP ID

Os04t0450600-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:22448084:22450533:1 gene:Os04g0450600 transcript:Os04t0450600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.21 protein. (Os04t0450600-00)
Sequence

MAVLKSLVACKGLALCAPAIAQRHRNTPLSASAHRRQILITGLTMNSSGINSALPVRGAA
QIPAVGSGPPAPSGGNLPVPSMPSWAKWVVGAIIVAIPIYRKIRALEDTVEKTAEVAIEV
VDTVAEATEKVAGELADAFPGNENLKEVASKIKTVADVIEDDAEKAEALIQKVDEIKKEL
DAIVDPIIDKIDKEEL

Transcript Sequence

Transcript ID

Os04t0450600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22448084:22450533:1 gene:Os04g0450600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.21 protein. (Os04t0450600-00)
Sequence

AACACATGCATACTGCGCCAAGTTGAAGGCTACAAAAACTTATAGAAGAGTAGCTTCAAC
GCAGAAGAAACCTGAACTCTTCAAATCCCATGGCGGTGCTCAAATCTCTTGTTGCTTGCA
AAGGCTTGGCGCTGTGCGCTCCAGCGATTGCTCAGCGTCACCGGAACACGCCGTTATCTG
CATCGGCTCATCGCCGGCAAATCCTGATCACCGGCTTAACGATGAACTCCTCGGGCATCA
ATAGTGCTTTGCCGGTCAGAGGAGCTGCACAAATCCCTGCAGTTGGTTCTGGTCCTCCAG
CACCGTCAGGAGGAAATCTCCCAGTACCCAGCATGCCTTCATGGGCCAAATGGGTAGTTG
GGGCCATCATTGTTGCTATACCCATCTACAGAAAGATAAGAGCATTGGAAGACACCGTGG
AGAAGACAGCGGAGGTAGCAATCGAGGTGGTCGACACGGTGGCGGAGGCGACTGAGAAGG
TCGCCGGCGAGCTGGCCGACGCTTTTCCCGGCAACGAAAATCTCAAGGAGGTTGCCTCCA
AGATTAAGACCGTAGCCGATGTGATAGAGGATGATGCCGAGAAAGCCGAGGCCCTAATCC
AGAAGGTTGATGAGATAAAGAAAGAGTTGGATGCAATAGTGGATCCCATCATCGACAAGA
TAGACAAGGAAGAGCTGTAGGGGAAGGACCCTTTTGGCAGGAGGGGGAAAGCAAACAGAA
ACTAAATACACATTTAGTAGCAAAGAAAACTGCTACTGTTACAACTCAGTTTTTTAGTTT
GGTAGCACCACGACAACAGGCAAAATGCGTGTTTGATGCCATTGCCTTCCCGATTGATTG
ATGATTGATATAATAGACGCTTGCAGCGCAGGCGTGTGTTTGTACAGTTCCTGTTGGAGT
GTTGTGTTGGCCACAGGATGGTAGTAATAATAACTGCCATCAGACTCCACTGATCG